RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 FRMD5Q7Z6J6 570 aa16.75■□□□□ 0.27
CTSD-207ENST00000636571 KLHL23Q8NBE8 558 aa16.75■□□□□ 0.27
CTSD-207ENST00000636571 BEST2Q8NFU1 509 aa16.75■□□□□ 0.27
CTSD-207ENST00000636571 ARNTL2Q8WYA1 636 aa16.75■□□□□ 0.27
CTSD-207ENST00000636571 SLC35C1Q96A29 364 aa16.75■□□□□ 0.27
CTSD-207ENST00000636571 ZNF558Q96NG5 402 aa16.75■□□□□ 0.27
CTSD-207ENST00000636571 XPO4Q9C0E2 1151 aaKnown RBP16.75■□□□□ 0.27
CTSD-207ENST00000636571 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.75■□□□□ 0.274e-7■■■■■ 55.8
CTSD-207ENST00000636571 LIMA1Q9UHB6 759 aaKnown RBP16.75■□□□□ 0.27
CTSD-207ENST00000636571 FAN1Q9Y2M0 1017 aa16.75■□□□□ 0.27
CTSD-207ENST00000636571 COL4A4P53420 1690 aaPredicted RBP16.75■□□□□ 0.27
CTSD-207ENST00000636571 MYO7AQ13402 2215 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 C4BPAP04003 597 aaKnown RBP16.74■□□□□ 0.27
CTSD-207ENST00000636571 ALDH2P05091 517 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 LAG3P18627 525 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 EEF1GP26641 437 aaKnown RBP16.74■□□□□ 0.27
CTSD-207ENST00000636571 POLR2BP30876 1174 aaKnown RBP16.74■□□□□ 0.27
CTSD-207ENST00000636571 BMPR1AP36894 532 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 ALDH7A1P49419 539 aaKnown RBP16.74■□□□□ 0.27
CTSD-207ENST00000636571 SURF1Q15526 300 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 DUOXA2Q1HG44 320 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 C9orf57Q5W0N0 161 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 SV2AQ7L0J3 742 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 APTXQ7Z2E3 356 aaKnown RBP16.74■□□□□ 0.27
CTSD-207ENST00000636571 TRIM59Q8IWR1 403 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 SLC39A11Q8N1S5 342 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 ANKRD36BP1Q96IX9 119 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 TGS1Q96RS0 853 aaKnown RBP16.74■□□□□ 0.27
CTSD-207ENST00000636571 TMEM175Q9BSA9 504 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 VN1R3Q9BXE9 311 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 TTYH1Q9H313 450 aaPredicted RBP16.74■□□□□ 0.27
CTSD-207ENST00000636571 ALG13Q9NP73 1137 aaKnown RBP16.74■□□□□ 0.27
CTSD-207ENST00000636571 VWA8A3KMH1 1905 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 ATG2AQ2TAZ0 1938 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 SPTLC1O15269 473 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 B3GAT3O94766 335 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 VNN1O95497 513 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 KRT19P08727 400 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 CYP3A5P20815 502 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 LRPAP1P30533 357 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 BRCC3P46736 316 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 ZNF75DP51815 510 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 COPB1P53618 953 aaKnown RBP16.74■□□□□ 0.27
CTSD-207ENST00000636571 MARSP56192 900 aaKnown RBP16.74■□□□□ 0.27
CTSD-207ENST00000636571 ERVK-21P61565 698 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 HSP90AA2PQ14568 343 aaPredicted RBP16.74■□□□□ 0.27
CTSD-207ENST00000636571 HABP4Q5JVS0 413 aaKnown RBP16.74■□□□□ 0.27
CTSD-207ENST00000636571 SARM1Q6SZW1 724 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 ANKRD20A12PQ8NF67 263 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 RSPH1Q8WYR4 309 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 TUBGCP2Q9BSJ2 902 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 AGAP1Q9UPQ3 857 aa16.74■□□□□ 0.27
CTSD-207ENST00000636571 ANO9A1A5B4 782 aa16.73■□□□□ 0.27
CTSD-207ENST00000636571 PIRO00625 290 aa16.73■□□□□ 0.27
CTSD-207ENST00000636571 FGF18O76093 207 aa16.73■□□□□ 0.27
CTSD-207ENST00000636571 GNA14O95837 355 aa16.73■□□□□ 0.27
CTSD-207ENST00000636571 TNNC2P02585 160 aa16.73■□□□□ 0.27
CTSD-207ENST00000636571 MCCD1P59942 119 aaPredicted RBP16.73■□□□□ 0.27
CTSD-207ENST00000636571 BIRC3Q13489 604 aa16.73■□□□□ 0.27
CTSD-207ENST00000636571 C15orf39Q6ZRI6 1047 aa16.73■□□□□ 0.27
CTSD-207ENST00000636571 TAS1R1Q7RTX1 841 aa16.73■□□□□ 0.27
CTSD-207ENST00000636571 NT5DC4Q86YG4 428 aa16.73■□□□□ 0.27
CTSD-207ENST00000636571 GDPD5Q8WTR4 605 aa16.73■□□□□ 0.27
CTSD-207ENST00000636571 CACTINQ8WUQ7 758 aaKnown RBP16.73■□□□□ 0.27
CTSD-207ENST00000636571 ANP32BQ92688 251 aaKnown RBP16.73■□□□□ 0.27
CTSD-207ENST00000636571 IGSF21Q96ID5 467 aa16.73■□□□□ 0.27
CTSD-207ENST00000636571 B3GALT6Q96L58 329 aa16.73■□□□□ 0.27
CTSD-207ENST00000636571 FAM161BQ96MY7 647 aa16.73■□□□□ 0.27
CTSD-207ENST00000636571 ZNF576Q9H609 170 aa16.73■□□□□ 0.27
CTSD-207ENST00000636571 METTL14Q9HCE5 456 aaKnown RBP16.73■□□□□ 0.27
CTSD-207ENST00000636571 PCDHB12Q9Y5F1 795 aa16.73■□□□□ 0.27
CTSD-207ENST00000636571 TEX33O43247 280 aa16.72■□□□□ 0.27
CTSD-207ENST00000636571 XPOTO43592 962 aaKnown RBP16.72■□□□□ 0.27
CTSD-207ENST00000636571 DNAJB1P25685 340 aa16.72■□□□□ 0.27
CTSD-207ENST00000636571 ZACNQ401N2 412 aa16.72■□□□□ 0.27
CTSD-207ENST00000636571 TAS1R2Q8TE23 839 aa16.72■□□□□ 0.27
CTSD-207ENST00000636571 GPR62Q9BZJ7 368 aa16.72■□□□□ 0.27
CTSD-207ENST00000636571 GRM6O15303 877 aa16.72■□□□□ 0.27
CTSD-207ENST00000636571 MYL6P60660 151 aa16.72■□□□□ 0.27
CTSD-207ENST00000636571 KCNH2Q12809 1159 aa16.72■□□□□ 0.27
CTSD-207ENST00000636571 DCLRE1AQ6PJP8 1040 aa16.72■□□□□ 0.27
CTSD-207ENST00000636571 FBXO22Q8NEZ5 403 aa16.72■□□□□ 0.27
CTSD-207ENST00000636571 SEMA4DQ92854 862 aa16.72■□□□□ 0.27
CTSD-207ENST00000636571 TSPAN18Q96SJ8 248 aa16.72■□□□□ 0.27
CTSD-207ENST00000636571 PI4K2AQ9BTU6 479 aa16.72■□□□□ 0.27
CTSD-207ENST00000636571 AAASQ9NRG9 546 aa16.72■□□□□ 0.27
CTSD-207ENST00000636571 SPG21Q9NZD8 308 aa16.72■□□□□ 0.27
CTSD-207ENST00000636571 ADAM28Q9UKQ2 775 aa16.72■□□□□ 0.27
CTSD-207ENST00000636571 ITGA11Q9UKX5 1188 aa16.72■□□□□ 0.27
CTSD-207ENST00000636571 PCDHGC5Q9Y5F6 944 aa16.72■□□□□ 0.27
CTSD-207ENST00000636571 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.72■□□□□ 0.27
CTSD-207ENST00000636571 C5orf67F2Z3F1 127 aa16.71■□□□□ 0.27
CTSD-207ENST00000636571 PHACTR2O75167 634 aa16.71■□□□□ 0.27
CTSD-207ENST00000636571 TADA2AO75478 443 aa16.71■□□□□ 0.27
CTSD-207ENST00000636571 RPL9P32969 192 aaKnown RBP16.71■□□□□ 0.27
CTSD-207ENST00000636571 FMO5P49326 533 aa16.71■□□□□ 0.27
CTSD-207ENST00000636571 FILIP1LQ4L180 1135 aa16.71■□□□□ 0.27
CTSD-207ENST00000636571 TIGD5Q53EQ6 642 aa16.71■□□□□ 0.27
CTSD-207ENST00000636571 MIIPQ5JXC2 388 aa16.71■□□□□ 0.27
CTSD-207ENST00000636571 SPOPLQ6IQ16 392 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms