RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 ZNF720Q7Z2F6 126 aa20.6■□□□□ 0.89
CLN6-213ENST00000636212 USP37Q86T82 979 aa20.6■□□□□ 0.89
CLN6-213ENST00000636212 FIZ1Q96SL8 496 aa20.6■□□□□ 0.89
CLN6-213ENST00000636212 PANK2Q9BZ23 570 aa20.6■□□□□ 0.89
CLN6-213ENST00000636212 FBXL5Q9UKA1 691 aa20.6■□□□□ 0.89
CLN6-213ENST00000636212 CPSF3Q9UKF6 684 aaKnown RBP20.6■□□□□ 0.89
CLN6-213ENST00000636212 PDCD11Q14690 1871 aaKnown RBP20.59■□□□□ 0.89
CLN6-213ENST00000636212 ARHGEF37A1IGU5 675 aa20.59■□□□□ 0.89
CLN6-213ENST00000636212 SPTLC2O15270 562 aa20.59■□□□□ 0.89
CLN6-213ENST00000636212 PDGFBP01127 241 aaPredicted RBP20.59■□□□□ 0.89
CLN6-213ENST00000636212 CPB1P15086 417 aa20.59■□□□□ 0.89
CLN6-213ENST00000636212 ATF2P15336 505 aa20.59■□□□□ 0.89
CLN6-213ENST00000636212 RFX1P22670 979 aa20.59■□□□□ 0.89
CLN6-213ENST00000636212 VCPP55072 806 aaKnown RBP20.59■□□□□ 0.89
CLN6-213ENST00000636212 NHLH1Q02575 133 aa20.59■□□□□ 0.89
CLN6-213ENST00000636212 ZBTB6Q15916 424 aa20.59■□□□□ 0.89
CLN6-213ENST00000636212 PABPC1LQ4VXU2 614 aaKnown RBP20.59■□□□□ 0.89
CLN6-213ENST00000636212 ELMOD1Q8N336 334 aa20.59■□□□□ 0.89
CLN6-213ENST00000636212 POMGNT1Q8WZA1 660 aa20.59■□□□□ 0.89
CLN6-213ENST00000636212 ACCSQ96QU6 501 aa20.59■□□□□ 0.89
CLN6-213ENST00000636212 ASB7Q9H672 318 aa20.59■□□□□ 0.89
CLN6-213ENST00000636212 CYP4F11Q9HBI6 524 aa20.59■□□□□ 0.89
CLN6-213ENST00000636212 AGO2Q9UKV8 859 aaKnown RBP20.59■□□□□ 0.89
CLN6-213ENST00000636212 CDH7Q9ULB5 785 aa20.59■□□□□ 0.89
CLN6-213ENST00000636212 MAFFQ9ULX9 164 aa20.59■□□□□ 0.89
CLN6-213ENST00000636212 DERAQ9Y315 318 aa20.59■□□□□ 0.89
CLN6-213ENST00000636212 PCDHB13Q9Y5F0 798 aa20.59■□□□□ 0.89
CLN6-213ENST00000636212 MYO10Q9HD67 2058 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 MYMKA6NI61 221 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 ABLIM3O94929 683 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 GCNT3O95395 438 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 NTHL1P78549 312 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 YWHAHQ04917 246 aaPredicted RBP20.58■□□□□ 0.89
CLN6-213ENST00000636212 ALCAMQ13740 583 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 MRPL58Q14197 206 aaKnown RBP20.58■□□□□ 0.89
CLN6-213ENST00000636212 TMEM132DQ14C87 1099 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 ZBTB41Q5SVQ8 909 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 IER5LQ5T953 404 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 SPATA1Q5VX52 437 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 ASTLQ6HA08 431 aaPredicted RBP20.58■□□□□ 0.89
CLN6-213ENST00000636212 JADE1Q6IE81 842 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 SLC39A4Q6P5W5 647 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 MTSS1LQ765P7 747 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 SLC44A3Q8N4M1 653 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 PDILTQ8N807 584 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 LINC00301Q8NCQ3 95 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 FLCNQ8NFG4 579 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 RSAD2Q8WXG1 361 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 KCNH3Q9ULD8 1083 aa20.58■□□□□ 0.89
CLN6-213ENST00000636212 WDR27A2RRH5 827 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 ANKRD63C9JTQ0 380 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 M0QZQ0 153 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 STK25O00506 426 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 FAM189A1O60320 539 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 PPP6R2O75170 966 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 ADRB2P07550 413 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 SRFP11831 508 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 PTPN2P17706 415 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 ACOT2P49753 483 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 POU5F1Q01860 360 aaKnown RBP20.57■□□□□ 0.88
CLN6-213ENST00000636212 STXBP4Q6ZWJ1 553 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 CCDC65Q8IXS2 484 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 TCEAL8Q8IYN2 117 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 SYCP3Q8IZU3 236 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 PRSS33Q8NF86 280 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 OLFML3Q9NRN5 406 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 PANK4Q9NVE7 773 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 TBC1D7Q9P0N9 293 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 TFIP11Q9UBB9 837 aaKnown RBP20.57■□□□□ 0.88
CLN6-213ENST00000636212 WNT16Q9UBV4 365 aa20.57■□□□□ 0.88
CLN6-213ENST00000636212 MRPS23Q9Y3D9 190 aaKnown RBP20.57■□□□□ 0.88
CLN6-213ENST00000636212 TULP1O00294 542 aaPredicted RBP20.56■□□□□ 0.88
CLN6-213ENST00000636212 TBC1D4O60343 1298 aa20.56■□□□□ 0.88
CLN6-213ENST00000636212 YEATS4O95619 227 aa20.56■□□□□ 0.88
CLN6-213ENST00000636212 CFHP08603 1231 aa20.56■□□□□ 0.88
CLN6-213ENST00000636212 HOXD11P31277 338 aaPredicted RBP20.56■□□□□ 0.88
CLN6-213ENST00000636212 CLCN5P51795 746 aa20.56■□□□□ 0.88
CLN6-213ENST00000636212 AMPD3Q01432 767 aa20.56■□□□□ 0.88
CLN6-213ENST00000636212 L1TD1Q5T7N2 865 aaKnown RBP20.56■□□□□ 0.88
CLN6-213ENST00000636212 IQCEQ6IPM2 695 aa20.56■□□□□ 0.88
CLN6-213ENST00000636212 SIX5Q8N196 739 aa20.56■□□□□ 0.88
CLN6-213ENST00000636212 FGF13Q92913 245 aa20.56■□□□□ 0.88
CLN6-213ENST00000636212 DNAJC19Q96DA6 116 aa20.56■□□□□ 0.88
CLN6-213ENST00000636212 CUEDC2Q9H467 287 aa20.56■□□□□ 0.88
CLN6-213ENST00000636212 DNMT3BQ9UBC3 853 aaKnown RBP20.56■□□□□ 0.88
CLN6-213ENST00000636212 AFF4Q9UHB7 1163 aaKnown RBP20.56■□□□□ 0.88
CLN6-213ENST00000636212 STYXL1Q9Y6J8 313 aa20.56■□□□□ 0.88
CLN6-213ENST00000636212 NUMBLQ9Y6R0 609 aa20.56■□□□□ 0.88
CLN6-213ENST00000636212 ANHXE9PGG2 379 aa20.55■□□□□ 0.88
CLN6-213ENST00000636212 NARSO43776 548 aaKnown RBP20.55■□□□□ 0.88
CLN6-213ENST00000636212 CUTAO60888 179 aa20.55■□□□□ 0.88
CLN6-213ENST00000636212 IL18RAPO95256 599 aa20.55■□□□□ 0.88
CLN6-213ENST00000636212 LDHAP00338 332 aaKnown RBP20.55■□□□□ 0.88
CLN6-213ENST00000636212 ODC1P11926 461 aa20.55■□□□□ 0.88
CLN6-213ENST00000636212 ADCY1Q08828 1119 aa20.55■□□□□ 0.88
CLN6-213ENST00000636212 HTR4Q13639 388 aa20.55■□□□□ 0.88
CLN6-213ENST00000636212 FOXD4L5Q5VV16 416 aaPredicted RBP20.55■□□□□ 0.88
CLN6-213ENST00000636212 FOXD4L4Q8WXT5 416 aaPredicted RBP20.55■□□□□ 0.88
CLN6-213ENST00000636212 HCFC1R1Q9NWW0 138 aa20.55■□□□□ 0.88
CLN6-213ENST00000636212 C2CD2Q9Y426 696 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms