RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 SLCO1B3Q9NPD5 702 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 ACP6Q9NPH0 428 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 WRAP73Q9P2S5 460 aaPredicted RBP15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 R3HDM2Q9Y2K5 976 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 QSER1Q2KHR3 1735 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 KLHL33A6NCF5 533 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 ANKRD33BA6NCL7 494 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 NVLO15381 856 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 GRIN3BO60391 1043 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 TROVE2P10155 538 aaKnown RBP eCLIP15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 RALAP11233 206 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 CA4P22748 312 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 CEP55Q53EZ4 464 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 TRAPPC3LQ5T215 181 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 MAEAQ7L5Y9 396 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 GSTA5Q7RTV2 222 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 SIAH1Q8IUQ4 282 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 HELQQ8TDG4 1101 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 UNC45AQ9H3U1 944 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 ST6GALNAC4Q9H4F1 302 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 PAPOLBQ9NRJ5 636 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 PI4KBQ9UBF8 816 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 SLC24A2Q9UI40 661 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 STRCQ7RTU9 1775 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 LOXHD1Q8IVV2 1947 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 KLRC2P26717 231 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 ROR2Q01974 943 aaKnown RBP15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 TAF1BQ53T94 588 aaPredicted RBP15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 RBM26Q5T8P6 1007 aaKnown RBP15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 ENOSF1Q7L5Y1 443 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 NLRP9Q7RTR0 991 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 RHOT1Q8IXI2 618 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 MCOLN2Q8IZK6 566 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 PLEKHO2Q8TD55 490 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 HERPUD2Q9BSE4 406 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 SAYSD1Q9NPB0 183 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 CYLDQ9NQC7 956 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 LRCH1Q9Y2L9 728 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 ASB3Q9Y575 518 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 MYH11P35749 1972 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 CCDC22O60826 627 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 CBX6O95503 412 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 PDHA1P08559 390 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 SKIP12755 728 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 PLS3P13797 630 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 GCAP28676 217 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 BIRC2Q13490 618 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 CCDC6Q16204 474 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 P3H1Q32P28 736 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 THEMIS2Q5TEJ8 643 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 TMEM154Q6P9G4 183 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 C4orf50Q6ZRC1 276 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 CERS5Q8N5B7 392 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 PARD3BQ8TEW8 1205 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 TEKT4Q8WW24 435 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 SPOCK2Q92563 424 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 ZNF333Q96JL9 665 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 OSBPL8Q9BZF1 889 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 TMEM8AQ9HCN3 771 aa15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 CCNL1Q9UK58 526 aaPredicted RBP15.69■□□□□ 0.1
CACNA1A-220ENST00000635988 TISP43B9A030 160 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 H0Y3Z8 333 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 PROSCO94903 275 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 POLR2MP0CAP2 368 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 RPA3P35244 121 aaPredicted RBP15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 GTF2BQ00403 316 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 PKN2Q16513 984 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 CWF19L1Q69YN2 538 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 APOBEC3HQ6NTF7 200 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 B3GNT9Q6UX72 402 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 SLC30A10Q6XR72 485 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 USP37Q86T82 979 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 ZNF677Q86XU0 584 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 KATNAL2Q8IYT4 538 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 ZFAND2BQ8WV99 257 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 SEMA4DQ92854 862 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 RIT2Q99578 217 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 HEMGNQ9BXL5 484 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 POC1B-GALNT4F8VUJ3 575 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 DNALI1O14645 258 aaPredicted RBP15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 ATP2A1O14983 1001 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 TYROBPO43914 113 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 ENTPD5O75356 428 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 CFBP00751 764 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 GSTA2P09210 222 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 UNGP13051 313 aaPredicted RBP15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 ADSSP30520 456 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 OCRLQ01968 901 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 NFIAQ12857 509 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 NBPF20Q3BBV1 942 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 PCNX4Q63HM2 1172 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 TATDN1Q6P1N9 297 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 OTOAQ7RTW8 1153 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 CLNKQ7Z7G1 428 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 FBXL13Q8NEE6 735 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 EXD1Q8NHP7 514 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 TTC8Q8TAM2 541 aa15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 ZNF75CPQ92670 426 aaPredicted RBP15.68■□□□□ 0.1
CACNA1A-220ENST00000635988 TAF1LQ8IZX4 1826 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms