RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 USP50Q70EL3 339 aaPredicted RBP13.05□□□□□ -0.32
PHACTR4-206ENST00000632421 ZDHHC14Q8IZN3 488 aa13.05□□□□□ -0.32
PHACTR4-206ENST00000632421 RUNDC3BQ96NL0 473 aa13.05□□□□□ -0.32
PHACTR4-206ENST00000632421 TCRBV7S2A1N4TA0A589 114 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 H0YGN5 161 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 MYO1FO00160 1098 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 PODXLO00592 558 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 SLC1A1P43005 524 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 SLC26A2P50443 739 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 NOMO3P69849 1222 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 MCL1Q07820 350 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 DHX9Q08211 1270 aaKnown RBP13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 ICE2Q659A1 982 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 GPAT2Q6NUI2 795 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 TTC27Q6P3X3 843 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 CCDC137Q6PK04 289 aaKnown RBP13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 PHLDB2Q86SQ0 1253 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 RHPN2Q8IUC4 686 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 PASD1Q8IV76 773 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 ATP6V1G3Q96LB4 118 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 TRIM7Q9C029 511 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 SMARCAD1Q9H4L7 1026 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 EFCC1Q9HA90 598 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 NFS1Q9Y697 457 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 HMGB1P1B2RPK0 211 aaPredicted RBP13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 THAP12O43422 761 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 TXNP10599 105 aaKnown RBP13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 SKOR1P84550 965 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 ARMC9Q7Z3E5 817 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 ZC3H15Q8WU90 426 aaKnown RBP13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 COPS5Q92905 334 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 FAM212AQ96EL1 285 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 C11orf70Q9BRQ4 267 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 MTMR12Q9C0I1 747 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 ZDHHC18Q9NUE0 388 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 ASS1P00966 412 aaKnown RBP13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 CFHP08603 1231 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 MYZAPP0CAP1 466 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 TFDP1Q14186 410 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 TTLL4Q14679 1199 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 SURF1Q15526 300 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 C2CD6Q53TS8 623 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 PPP1R2P3Q6NXS1 205 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 VCPIP1Q96JH7 1222 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 ADAM22Q9P0K1 906 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 SNX24Q9Y343 169 aa13.04□□□□□ -0.32
PHACTR4-206ENST00000632421 PPFIA2O75334 1257 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 RARAP10276 462 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 GBP1P32455 592 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 COILP38432 576 aaPredicted RBP13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 IRAK1P51617 712 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 SIX1Q15475 284 aaPredicted RBP13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 DUOXA2Q1HG44 320 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 CCDC105Q8IYK2 499 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 TRAPPC12Q8WVT3 735 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 TMBIM4Q9HC24 238 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 A6NNZ2 444 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 ABLIM1O14639 778 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 HBP1O60381 514 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 CST3P01034 146 aaPredicted RBP13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 EPHX2P34913 555 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 FNTAP49354 379 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 ZNF132P52740 706 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 ZNF844Q08AG5 666 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 TUBB8Q3ZCM7 444 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 TTC31Q49AM3 519 aaPredicted RBP13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 DPY19L2Q6NUT2 758 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 LLGL2Q6P1M3 1020 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 PHF13Q86YI8 300 aaPredicted RBP13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 C12orf50Q8NA57 414 aaPredicted RBP13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 OR2W6PQ8NHA6 318 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 NLRP4Q96MN2 994 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 MRPL47Q9HD33 250 aaKnown RBP13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 CPSF3Q9UKF6 684 aaKnown RBP13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 ASB14A6NK59 587 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 FSCN2O14926 492 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 PROSCO94903 275 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 SSTR3P32745 418 aaPredicted RBP13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 PLTPP55058 493 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 GNGT1P63211 74 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 SPDYCQ5MJ68 293 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 MPZL3Q6UWV2 235 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 KDM7AQ6ZMT4 941 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 TSHZ1Q6ZSZ6 1077 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 EP400NLQ6ZTU2 488 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 UBR7Q8N806 425 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 SHCBP1Q8NEM2 672 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 SCINQ9Y6U3 715 aa13.03□□□□□ -0.32
PHACTR4-206ENST00000632421 INO80B-WBP1J3KQ70 363 aa13.02□□□□□ -0.32
PHACTR4-206ENST00000632421 ACKR2O00590 384 aa13.02□□□□□ -0.32
PHACTR4-206ENST00000632421 NR1D1P20393 614 aa13.02□□□□□ -0.32
PHACTR4-206ENST00000632421 MYL6P60660 151 aa13.02□□□□□ -0.32
PHACTR4-206ENST00000632421 C1QBPQ07021 282 aaKnown RBP13.02□□□□□ -0.32
PHACTR4-206ENST00000632421 SNAPC2Q13487 334 aa13.02□□□□□ -0.32
PHACTR4-206ENST00000632421 TMEM132AQ24JP5 1023 aa13.02□□□□□ -0.32
PHACTR4-206ENST00000632421 SCARA3Q6AZY7 606 aa13.02□□□□□ -0.32
PHACTR4-206ENST00000632421 RUFY4Q6ZNE9 571 aa13.02□□□□□ -0.32
PHACTR4-206ENST00000632421 MMS22LQ6ZRQ5 1243 aa13.02□□□□□ -0.32
PHACTR4-206ENST00000632421 L3MBTL3Q96JM7 780 aaPredicted RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms