RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 MEIS1O00470 390 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 SMAD7O15105 426 aaKnown RBP5.34□□□□□ -1.55
LINC00550-201ENST00000629293 RPLP2P05387 115 aaKnown RBP5.34□□□□□ -1.55
LINC00550-201ENST00000629293 CDC25BP30305 580 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 TBC1D8BQ0IIM8 1120 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 PWP1Q13610 501 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 MTERF2Q49AM1 385 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 ODR4Q5SWX8 454 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 SARM1Q6SZW1 724 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 ABHD15Q6UXT9 468 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 FILIP1Q7Z7B0 1213 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 LRRC43Q8N309 656 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 HPS1Q92902 700 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 PHKBQ93100 1093 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 NLRP4Q96MN2 994 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 TMEM117Q9H0C3 514 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 RGS18Q9NS28 235 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 C1orf112Q9NSG2 853 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 PIN4Q9Y237 131 aaKnown RBP5.34□□□□□ -1.55
LINC00550-201ENST00000629293 FASNP49327 2511 aaKnown RBP5.34□□□□□ -1.55
LINC00550-201ENST00000629293 YEATS4O95619 227 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 PSAPP07602 524 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 EPCAMP16422 314 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 LIFRP42702 1097 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 SLC26A2P50443 739 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 ZNF75DP51815 510 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 CRYBB1P53674 252 aaPredicted RBP5.34□□□□□ -1.55
LINC00550-201ENST00000629293 UBE3AQ05086 875 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 NOLC1Q14978 699 aaKnown RBP eCLIP5.34□□□□□ -1.55
LINC00550-201ENST00000629293 ZNF484Q5JVG2 852 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 CCDC81Q6ZN84 652 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 LRRC55Q6ZSA7 311 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 ASCL5Q7RTU5 278 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 REXO1Q8N1G1 1221 aaKnown RBP5.34□□□□□ -1.55
LINC00550-201ENST00000629293 LINC00528Q8N1L1 170 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 FBXO18Q8NFZ0 1043 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 RIPOR3Q96MK2 946 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 KCNH6Q9H252 994 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 NGRNQ9NPE2 291 aaKnown RBP5.34□□□□□ -1.55
LINC00550-201ENST00000629293 PYCARDQ9ULZ3 195 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 CNTNAP5Q8WYK1 1306 aa5.34□□□□□ -1.56
LINC00550-201ENST00000629293 LOXHD1Q8IVV2 1947 aa5.34□□□□□ -1.56
LINC00550-201ENST00000629293 ADAMTS3O15072 1205 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 MMP20O60882 483 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 C22orf31O95567 290 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 CES1P23141 567 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 CDC27P30260 824 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 PPM1AP35813 382 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 PRKCEQ02156 737 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 DDR2Q16832 855 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 SPECC1Q5M775 1068 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 ATAT1Q5SQI0 421 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 BNC2Q6ZN30 1099 aaPredicted RBP5.33□□□□□ -1.56
LINC00550-201ENST00000629293 FRMD5Q7Z6J6 570 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 CABP7Q86V35 215 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 TMEM173Q86WV6 379 aaPredicted RBP5.33□□□□□ -1.56
LINC00550-201ENST00000629293 FMR1NBQ8N0W7 255 aaPredicted RBP5.33□□□□□ -1.56
LINC00550-201ENST00000629293 TDRD5Q8NAT2 981 aaKnown RBP5.33□□□□□ -1.56
LINC00550-201ENST00000629293 GOLM1Q8NBJ4 401 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 LINC00301Q8NCQ3 95 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 PMEPA1Q969W9 287 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 MAP3K14Q99558 947 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 ADAM7Q9H2U9 754 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 CWH43Q9H720 699 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 LIN7BQ9HAP6 207 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 SORCS3Q9UPU3 1222 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 PRG3Q9Y2Y8 225 aaPredicted RBP5.33□□□□□ -1.56
LINC00550-201ENST00000629293 NR2E1Q9Y466 385 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 PCDHA10Q9Y5I2 948 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 SQORQ9Y6N5 450 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 UQCRHLA0A096LP55 91 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 MEIS3P2A8K0S8 358 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 GAS7O60861 476 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 UQCRHP07919 91 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 SPATA31D3P0C874 917 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 SMARCA1P28370 1054 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 SREBF1P36956 1147 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 ZNF165P49910 485 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 BCAR1P56945 870 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 GUCY1B3Q02153 619 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 DRP2Q13474 957 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 STX1AQ16623 288 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 CLLU1OSQ5K130 101 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 ADALQ6DHV7 355 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 SPATA31D4Q6ZUB0 917 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 C11orf57Q6ZUT1 292 aaPredicted RBP5.33□□□□□ -1.56
LINC00550-201ENST00000629293 BRAPQ7Z569 592 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 BMP8AQ7Z5Y6 402 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 ECHDC2Q86YB7 292 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 RHPN2Q8IUC4 686 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 KSR1Q8IVT5 923 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 TRIM42Q8IWZ5 723 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 CRIPAKQ8N1N5 446 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 CEP120Q8N960 986 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 CASP10Q92851 521 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 ASIC4Q96FT7 647 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 CASD1Q96PB1 797 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 CDCA3Q99618 268 aaPredicted RBP5.33□□□□□ -1.56
LINC00550-201ENST00000629293 PRRX2Q99811 253 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 FAM126AQ9BYI3 521 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms