RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 DDB2Q92466 427 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 PMM1Q92871 262 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 SARAFQ96BY9 339 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 RNPEPQ9H4A4 650 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 UNKLQ9H9P5 680 aaKnown RBP4.14□□□□□ -1.75
VPS8-228ENST00000628962 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.14□□□□□ -1.75
VPS8-228ENST00000628962 AASDHPPTQ9NRN7 309 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 KCNE5Q9UJ90 142 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 ENTPD2Q9Y5L3 495 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 LCHNA4D1U4 455 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 ZNF891A8MT65 544 aaPredicted RBP4.13□□□□□ -1.75
VPS8-228ENST00000628962 ADCY6O43306 1168 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 GAS7O60861 476 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 KRT18P05783 430 aaKnown RBP4.13□□□□□ -1.75
VPS8-228ENST00000628962 GCSHP23434 173 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 RGS19P49795 217 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 RAB27AP51159 221 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 MANFP55145 182 aaKnown RBP4.13□□□□□ -1.75
VPS8-228ENST00000628962 SSBP2P81877 361 aaPredicted RBP4.13□□□□□ -1.75
VPS8-228ENST00000628962 PIN1Q13526 163 aaPredicted RBP4.13□□□□□ -1.75
VPS8-228ENST00000628962 MTMR1Q13613 665 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 SART3Q15020 963 aaKnown RBP4.13□□□□□ -1.75
VPS8-228ENST00000628962 LRRC41Q15345 812 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 SEPT7Q16181 437 aaKnown RBP4.13□□□□□ -1.75
VPS8-228ENST00000628962 AKNAD1Q5T1N1 836 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 KIAA0895LQ68EN5 471 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 LHFPL2Q6ZUX7 228 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 ZNF572Q7Z3I7 529 aaPredicted RBP4.13□□□□□ -1.75
VPS8-228ENST00000628962 MYO1HQ8N1T3 1032 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 NXPE1Q8N323 547 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 OR14C36Q8NHC7 312 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 HASPINQ8TF76 798 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 ZNF480Q8WV37 535 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 ZBTB9Q96C00 473 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 PTCD3Q96EY7 689 aaKnown RBP4.13□□□□□ -1.75
VPS8-228ENST00000628962 REXO4Q9GZR2 422 aaKnown RBP4.13□□□□□ -1.75
VPS8-228ENST00000628962 PUS7LQ9H0K6 701 aaKnown RBP4.13□□□□□ -1.75
VPS8-228ENST00000628962 PRDM12Q9H4Q4 367 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 ZIM2Q9NZV7 527 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 DMTF1Q9Y222 760 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 ATRNL1Q5VV63 1379 aa4.13□□□□□ -1.75
VPS8-228ENST00000628962 E2F8A0AVK6 867 aa4.12□□□□□ -1.75
VPS8-228ENST00000628962 MANSC4A6NHS7 340 aaPredicted RBP4.12□□□□□ -1.75
VPS8-228ENST00000628962 AKAP10O43572 662 aa4.12□□□□□ -1.75
VPS8-228ENST00000628962 EIF3JO75822 258 aaKnown RBP4.12□□□□□ -1.75
VPS8-228ENST00000628962 ITPKBP27987 946 aa4.12□□□□□ -1.75
VPS8-228ENST00000628962 SCNN1BP51168 640 aa4.12□□□□□ -1.75
VPS8-228ENST00000628962 VAV2P52735 878 aa4.12□□□□□ -1.75
VPS8-228ENST00000628962 OS9Q13438 667 aaPredicted RBP4.12□□□□□ -1.75
VPS8-228ENST00000628962 HDAC1Q13547 482 aaPredicted RBP4.12□□□□□ -1.75
VPS8-228ENST00000628962 TERF2Q15554 542 aa4.12□□□□□ -1.75
VPS8-228ENST00000628962 EZH2Q15910 746 aaKnown RBP4.12□□□□□ -1.75
VPS8-228ENST00000628962 C11orf87Q6NUJ2 197 aa4.12□□□□□ -1.75
VPS8-228ENST00000628962 PPP4R4Q6NUP7 873 aa4.12□□□□□ -1.75
VPS8-228ENST00000628962 CHMP4CQ96CF2 233 aa4.12□□□□□ -1.75
VPS8-228ENST00000628962 CCDC8Q9H0W5 538 aaPredicted RBP4.12□□□□□ -1.75
VPS8-228ENST00000628962 MS4A5Q9H3V2 200 aa4.12□□□□□ -1.75
VPS8-228ENST00000628962 IFT22Q9H7X7 185 aa4.12□□□□□ -1.75
VPS8-228ENST00000628962 THG1LQ9NWX6 298 aaKnown RBP4.12□□□□□ -1.75
VPS8-228ENST00000628962 APOBEC2Q9Y235 224 aaKnown RBP4.12□□□□□ -1.75
VPS8-228ENST00000628962 CDY2AQ9Y6F7 541 aa4.12□□□□□ -1.75
VPS8-228ENST00000628962 PHLDB1Q86UU1 1377 aa4.12□□□□□ -1.75
VPS8-228ENST00000628962 SMARCA4P51532 1647 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 WNT10BO00744 389 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 GPANK1O95872 356 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 MYL1P05976 194 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 LSP1P33241 339 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 IL2P60568 153 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 HSD11B2P80365 405 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 UBE4AQ14139 1066 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 SRSF7Q16629 238 aaKnown RBP eCLIP4.11□□□□□ -1.75
VPS8-228ENST00000628962 MAP9Q49MG5 647 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 CRELD2Q6UXH1 353 aaPredicted RBP4.11□□□□□ -1.75
VPS8-228ENST00000628962 C14orf80Q86SX3 495 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 DRC7Q8IY82 874 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 TRMT2AQ8IZ69 625 aaKnown RBP4.11□□□□□ -1.75
VPS8-228ENST00000628962 CNTD1Q8N815 330 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 SMC1BQ8NDV3 1235 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 REPS2Q8NFH8 660 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 COG1Q8WTW3 980 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 HOOK2Q96ED9 719 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 RPS6KC1Q96S38 1066 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 ANO3Q9BYT9 981 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 FAM30AQ9NZY2 134 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 ZNF180Q9UJW8 692 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 TRHDEQ9UKU6 1024 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 ZNF804BA4D1E1 1349 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 AATKQ6ZMQ8 1374 aa4.11□□□□□ -1.75
VPS8-228ENST00000628962 URB2Q14146 1524 aaKnown RBP4.11□□□□□ -1.75
VPS8-228ENST00000628962 GOLGA6CA6NDK9 693 aa4.1□□□□□ -1.75
VPS8-228ENST00000628962 GOLGA6BA6NDN3 693 aa4.1□□□□□ -1.75
VPS8-228ENST00000628962 TRIM38O00635 465 aa4.1□□□□□ -1.75
VPS8-228ENST00000628962 NEMP1O14524 444 aa4.1□□□□□ -1.75
VPS8-228ENST00000628962 TP73O15350 636 aa4.1□□□□□ -1.75
VPS8-228ENST00000628962 ZEB2O60315 1214 aa4.1□□□□□ -1.75
VPS8-228ENST00000628962 PRKCGP05129 697 aa4.1□□□□□ -1.75
VPS8-228ENST00000628962 CT47B1P0C2W7 299 aaPredicted RBP4.1□□□□□ -1.75
VPS8-228ENST00000628962 GOLGA6DP0CG33 693 aa4.1□□□□□ -1.75
VPS8-228ENST00000628962 ALOX15P16050 662 aaPredicted RBP4.1□□□□□ -1.75
VPS8-228ENST00000628962 GPD1P21695 349 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms