RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 B3GNTL1Q67FW5 361 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-223ENST00000628857 SP5Q6BEB4 398 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-223ENST00000628857 KCNV1Q6PIU1 500 aa3.95□□□□□ -1.78
CNOT1-223ENST00000628857 FOXR2Q6PJQ5 311 aa3.95□□□□□ -1.78
CNOT1-223ENST00000628857 ZNF365Q70YC5 407 aa3.95□□□□□ -1.78
CNOT1-223ENST00000628857 FBXO18Q8NFZ0 1043 aa3.95□□□□□ -1.78
CNOT1-223ENST00000628857 PROKR1Q8TCW9 393 aa3.95□□□□□ -1.78
CNOT1-223ENST00000628857 SLC9A6Q92581 669 aa3.95□□□□□ -1.78
CNOT1-223ENST00000628857 HPS3Q969F9 1004 aa3.95□□□□□ -1.78
CNOT1-223ENST00000628857 RHOBTB2Q9BYZ6 727 aa3.95□□□□□ -1.78
CNOT1-223ENST00000628857 GALNT9Q9HCQ5 603 aa3.95□□□□□ -1.78
CNOT1-223ENST00000628857 ZDHHC8Q9ULC8 765 aa3.95□□□□□ -1.78
CNOT1-223ENST00000628857 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.95□□□□□ -1.78
CNOT1-223ENST00000628857 WDR33Q9C0J8 1336 aaKnown RBP3.95□□□□□ -1.78
CNOT1-223ENST00000628857 TCRBV7S2A1N4TA0A589 114 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 KIAA0391O15091 583 aaKnown RBP3.94□□□□□ -1.78
CNOT1-223ENST00000628857 B3GALT2O43825 422 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 CDKL5O76039 1030 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 NDUFA10O95299 355 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 GPANK1O95872 356 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 CHEK2O96017 543 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 PF4V1P10720 104 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 EGR2P11161 476 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-223ENST00000628857 SLC6A2P23975 617 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 SMARCA1P28370 1054 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 AVPR1BP47901 424 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 RAB27AP51159 221 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 ZNF280AP59817 542 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-223ENST00000628857 OCA2Q04671 838 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 SNAPC2Q13487 334 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 PLEKHG6Q3KR16 790 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 CXorf57Q6NSI4 855 aaKnown RBP3.94□□□□□ -1.78
CNOT1-223ENST00000628857 Q6ZPA2 131 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 UBE3BQ7Z3V4 1068 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 MRGPRGQ86SM5 289 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 LDLRAD3Q86YD5 345 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 FAM90A1Q86YD7 464 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 Q8NA96 180 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 CPEB3Q8NE35 698 aaKnown RBP3.94□□□□□ -1.78
CNOT1-223ENST00000628857 DDX17Q92841 729 aaKnown RBP3.94□□□□□ -1.78
CNOT1-223ENST00000628857 SCAMP4Q969E2 229 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 MVB12AQ96EY5 273 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 PACSIN1Q9BY11 444 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 GTPBP4Q9BZE4 634 aaKnown RBP3.94□□□□□ -1.78
CNOT1-223ENST00000628857 SCAND2PQ9GZW5 306 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-223ENST00000628857 SIK2Q9H0K1 926 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 SLC12A5Q9H2X9 1139 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 TOR3AQ9H497 397 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 SERHL2Q9H4I8 314 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 RNF181Q9P0P0 153 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 CFAP97Q9P2B7 532 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 IP6K2Q9UHH9 426 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 PACSIN3Q9UKS6 424 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 NOX1Q9Y5S8 564 aa3.94□□□□□ -1.78
CNOT1-223ENST00000628857 A0A1W2PS29 197 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 F2RL2O00254 374 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 OFD1O75665 1012 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 PRSS23O95084 383 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 SLPIP03973 132 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 CD1AP06126 327 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 SBK3P0C264 359 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 FGFR4P22455 802 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 PRDX5P30044 214 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 SLC6A4P31645 630 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 ZEB1P37275 1124 aaPredicted RBP3.93□□□□□ -1.78
CNOT1-223ENST00000628857 NOMO3P69849 1222 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 CXADRP78310 365 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 SLFN5Q08AF3 891 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 KLF10Q13118 480 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 RESTQ13127 1097 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 NOGQ13253 232 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 NFE2Q16621 373 aaPredicted RBP3.93□□□□□ -1.78
CNOT1-223ENST00000628857 NOMO2Q5JPE7 1267 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 UTP14CQ5TAP6 766 aaKnown RBP3.93□□□□□ -1.78
CNOT1-223ENST00000628857 EMC10Q5UCC4 262 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 LAIR1Q6GTX8 287 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 SLC4A10Q6U841 1118 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 COLGALT2Q8IYK4 626 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 TBC1D15Q8TC07 691 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 NEU4Q8WWR8 484 aaPredicted RBP3.93□□□□□ -1.78
CNOT1-223ENST00000628857 JPH3Q8WXH2 748 aaPredicted RBP3.93□□□□□ -1.78
CNOT1-223ENST00000628857 LINC00476Q8WZB0 136 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 KAT5Q92993 513 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 RGMAQ96B86 450 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 CDK5RAP3Q96JB5 506 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 MAP3K14Q99558 947 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 ADAM2Q99965 735 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 MLST8Q9BVC4 326 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 TEX101Q9BY14 249 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 GPR35Q9HC97 309 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 SYBUQ9NX95 663 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 BCCIPQ9P287 314 aaKnown RBP eCLIP3.93□□□□□ -1.78
CNOT1-223ENST00000628857 ZNF180Q9UJW8 692 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 RUVBL1Q9Y265 456 aaKnown RBP3.93□□□□□ -1.78
CNOT1-223ENST00000628857 SPATA31A3Q5VYP0 1347 aa3.93□□□□□ -1.78
CNOT1-223ENST00000628857 A0A088AWK7 358 aa3.92□□□□□ -1.78
CNOT1-223ENST00000628857 CDHR4A6H8M9 788 aa3.92□□□□□ -1.78
CNOT1-223ENST00000628857 H3BML4 177 aa3.92□□□□□ -1.78
CNOT1-223ENST00000628857 SOAT2O75908 522 aa3.92□□□□□ -1.78
CNOT1-223ENST00000628857 AGFG2O95081 481 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms