RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 B4GALT5O43286 388 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 STX6O43752 255 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 HIP1RO75146 1068 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 CXCL14O95715 111 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 KRT18P05783 430 aaKnown RBP7.03□□□□□ -1.28
TCF4-249ENST00000625716 PLA2G4BP0C869 781 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 PDIA4P13667 645 aaKnown RBP7.03□□□□□ -1.28
TCF4-249ENST00000625716 ALAS2P22557 587 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 OR1G1P47890 313 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 PEX3P56589 373 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 CEBPZQ03701 1054 aaKnown RBP7.03□□□□□ -1.28
TCF4-249ENST00000625716 STRN3Q13033 797 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 ADAM15Q13444 863 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 CAMK1Q14012 370 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 GIT2Q14161 759 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 DHX8Q14562 1220 aaKnown RBP7.03□□□□□ -1.28
TCF4-249ENST00000625716 FAM187BQ17R55 369 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 CDCA2Q69YH5 1023 aaPredicted RBP7.03□□□□□ -1.28
TCF4-249ENST00000625716 RINT1Q6NUQ1 792 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 C20orf204Q6ZNR8 217 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 DDX53Q86TM3 631 aaKnown RBP7.03□□□□□ -1.28
TCF4-249ENST00000625716 CDR2LQ86X02 465 aaPredicted RBP7.03□□□□□ -1.28
TCF4-249ENST00000625716 ALDH16A1Q8IZ83 802 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 VPS52Q8N1B4 723 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 SLC39A11Q8N1S5 342 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 EFHBQ8N7U6 833 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 SMG8Q8ND04 991 aaKnown RBP7.03□□□□□ -1.28
TCF4-249ENST00000625716 ZNF417Q8TAU3 575 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 BSNDQ8WZ55 320 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 GLMNQ92990 594 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 SNX21Q969T3 373 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 IGSF21Q96ID5 467 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 RPS6KC1Q96S38 1066 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 ZNF587Q96SQ5 575 aaPredicted RBP7.03□□□□□ -1.28
TCF4-249ENST00000625716 GAD1Q99259 594 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 TMEM175Q9BSA9 504 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 COLEC11Q9BWP8 271 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 FZD8Q9H461 694 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 NRDE2Q9H7Z3 1164 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 C17orf75Q9HAS0 396 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 KCND2Q9NZV8 630 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 CCDC39Q9UFE4 941 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 CD207Q9UJ71 328 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 GIT1Q9Y2X7 761 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 RBM19Q9Y4C8 960 aaKnown RBP7.03□□□□□ -1.28
TCF4-249ENST00000625716 HES2Q9Y543 173 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 WDR81Q562E7 1941 aa7.03□□□□□ -1.28
TCF4-249ENST00000625716 NLRC5Q86WI3 1866 aa7.02□□□□□ -1.28
TCF4-249ENST00000625716 H0YCG3 227 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 FSCN2O14926 492 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 LINC01565O15544 149 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 GALTP07902 379 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 AKAP5P24588 427 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 GUCY2CP25092 1073 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 GTF2F1P35269 517 aaKnown RBP eCLIP7.02□□□□□ -1.29
TCF4-249ENST00000625716 MLH1P40692 756 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 MATR3P43243 847 aaKnown RBP eCLIP7.02□□□□□ -1.29
TCF4-249ENST00000625716 NPTX2P47972 431 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 SLC11A1P49279 550 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 SCNN1GP51170 649 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 YARSP54577 528 aaKnown RBP7.02□□□□□ -1.29
TCF4-249ENST00000625716 RAD51AP2Q09MP3 1159 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 CLUL1Q15846 466 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 DCAF4L1Q3SXM0 396 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 HYIQ5T013 277 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 ATF7IP2Q5U623 682 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 LLGL2Q6P1M3 1020 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 C1orf186Q6ZWK4 172 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 ADGRD2Q7Z7M1 963 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 ZNF280BQ86YH2 543 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 SYT2Q8N9I0 419 aaPredicted RBP7.02□□□□□ -1.29
TCF4-249ENST00000625716 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.02□□□□□ -1.29
TCF4-249ENST00000625716 SCG3Q8WXD2 468 aaKnown RBP7.02□□□□□ -1.29
TCF4-249ENST00000625716 ZNF396Q96N95 335 aaPredicted RBP7.02□□□□□ -1.29
TCF4-249ENST00000625716 PNMA5Q96PV4 448 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 TCHPQ9BT92 498 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 MMTAG2Q9BU76 263 aaKnown RBP7.02□□□□□ -1.29
TCF4-249ENST00000625716 KIFC3Q9BVG8 833 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 RUSC1Q9BVN2 902 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 MRPL4Q9BYD3 311 aaKnown RBP7.02□□□□□ -1.29
TCF4-249ENST00000625716 NXF3Q9H4D5 531 aaKnown RBP7.02□□□□□ -1.29
TCF4-249ENST00000625716 LARSQ9P2J5 1176 aaKnown RBP7.02□□□□□ -1.29
TCF4-249ENST00000625716 DNAJB4Q9UDY4 337 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 SSX2IPQ9Y2D8 614 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 PCDHGC5Q9Y5F6 944 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 CLIC4Q9Y696 253 aa7.02□□□□□ -1.29
TCF4-249ENST00000625716 PRRC2BQ5JSZ5 2229 aaKnown RBP7.01□□□□□ -1.29
TCF4-249ENST00000625716 MYO9BQ13459 2157 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.01□□□□□ -1.29
TCF4-249ENST00000625716 FAM229AH3BQW9 127 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 NRP1O14786 923 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 SLC16A4O15374 487 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 TBCAO75347 108 aaKnown RBP7.01□□□□□ -1.29
TCF4-249ENST00000625716 TADA2AO75478 443 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 DDHD2O94830 711 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 FAM13AO94988 1023 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 THP07101 528 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 PLS3P13797 630 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 NID1P14543 1247 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 IL9P15248 144 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms