RNA–Protein interactions for RNA: ENST00000625349.2

LUC7L3-223, Transcript of LUC7 like 3 pre-mRNA splicing factor, human

TSL 2 BASIC

Gene LUC7L3, Length 408 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LUC7L3-223	ENST00000625349	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.72	□□□□□ -0.21
LUC7L3-223	ENST00000625349	PIN4	Q9Y237	131 aa	Known RBP	13.72	□□□□□ -0.21
LUC7L3-223	ENST00000625349	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.72	□□□□□ -0.21	2e-12	■□□□□ 10.9
LUC7L3-223	ENST00000625349	NCOR2	Q9Y618	2525 aa		13.72	□□□□□ -0.21
LUC7L3-223	ENST00000625349	MEIS3P2	A8K0S8	358 aa		13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	GCNT3	O95395	438 aa		13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	PTMA	P06454	111 aa	Known RBP	13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	PBX1	P40424	430 aa		13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	SLC11A1	P49279	550 aa		13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	COPB1	P53618	953 aa	Known RBP	13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	RNASEL	Q05823	741 aa	Known RBP	13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	COL9A2	Q14055	689 aa	Predicted RBP	13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	MXD4	Q14582	209 aa	Predicted RBP	13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	CWF19L1	Q69YN2	538 aa	Known RBP	13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	SMYD5	Q6GMV2	418 aa		13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	DRC7	Q8IY82	874 aa		13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	TUBGCP2	Q9BSJ2	902 aa		13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	ZHX3	Q9H4I2	956 aa		13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	DMAC2	Q9NW81	257 aa		13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	INPP5F	Q9Y2H2	1132 aa		13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	ACACB	O00763	2458 aa		13.71	□□□□□ -0.21
LUC7L3-223	ENST00000625349	MED19	A0JLT2	244 aa	Predicted RBP	13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	LGALS16	A8MUM7	142 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	N4BP3	O15049	544 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	NRDC	O43847	1150 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	USO1	O60763	962 aa	Known RBP	13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	LILRB3	O75022	631 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	AOC1	P19801	751 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	HOXD13	P35453	343 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	ARL2	P36404	184 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	NAMPT	P43490	491 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	CLCN4	P51793	760 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	EFNA5	P52803	228 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	NPEPPS	P55786	919 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	RAD51AP2	Q09MP3	1159 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	ADAM9	Q13443	819 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	TDG	Q13569	410 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	MAN2A1	Q16706	1144 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	FIGN	Q5HY92	759 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	C15orf39	Q6ZRI6	1047 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	CCDC149	Q6ZUS6	474 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	CATSPER4	Q7RTX7	472 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	HAUS6	Q7Z4H7	955 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	CCDC150	Q8NCX0	1101 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	FEZF2	Q8TBJ5	459 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	NKD2	Q969F2	451 aa	Predicted RBP	13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	PGBD4	Q96DM1	585 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	CNTNAP3B	Q96NU0	1288 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	ERGIC2	Q96RQ1	377 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	NUP58	Q9BVL2	599 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	EMILIN2	Q9BXX0	1053 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	CNTNAP3	Q9BZ76	1288 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	EDEM3	Q9BZQ6	932 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	TMEM134	Q9H6X4	195 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	AGPAT5	Q9NUQ2	364 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	TBC1D7	Q9P0N9	293 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	DNAJB4	Q9UDY4	337 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	DUSP12	Q9UNI6	340 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	DAAM1	Q9Y4D1	1078 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	ZNF292	O60281	2723 aa		13.7	□□□□□ -0.22
LUC7L3-223	ENST00000625349	TMEM150B	A6NC51	233 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	TRIM49B	A6NDI0	452 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	TGFB1I1	O43294	461 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	B4GALT3	O60512	393 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	NPR3	P17342	541 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	NPTX2	P47972	431 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	TBX2	Q13207	712 aa	Predicted RBP	13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	EMC2	Q15006	297 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	MRPL10	Q7Z7H8	261 aa	Known RBP	13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	ZSCAN30	Q86W11	494 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	ZNF280B	Q86YH2	543 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	RHPN2	Q8IUC4	686 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	MAP4K3	Q8IVH8	894 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	TMEM161B	Q8NDZ6	487 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	CCDC112	Q8NEF3	446 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	CMAS	Q8NFW8	434 aa	Predicted RBP	13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	URGCP	Q8TCY9	931 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	HPS3	Q969F9	1004 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	CCDC51	Q96ER9	411 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	KLHL5	Q96PQ7	755 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	RTP3	Q9BQQ7	232 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	TMEM175	Q9BSA9	504 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	NFKBIZ	Q9BYH8	718 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	RHOBTB2	Q9BYZ6	727 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	IFT122	Q9HBG6	1241 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	XPNPEP1	Q9NQW7	623 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	ARHGAP28	Q9P2N2	729 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	KANSL3	Q9P2N6	904 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	PCDHB2	Q9Y5E7	798 aa		13.69	□□□□□ -0.22
LUC7L3-223	ENST00000625349	CNTNAP2	Q9UHC6	1331 aa		13.68	□□□□□ -0.22
LUC7L3-223	ENST00000625349	DMXL1	Q9Y485	3027 aa		13.68	□□□□□ -0.22
LUC7L3-223	ENST00000625349	PMM2	O15305	246 aa		13.68	□□□□□ -0.22
LUC7L3-223	ENST00000625349	PIGR	P01833	764 aa		13.68	□□□□□ -0.22
LUC7L3-223	ENST00000625349	TPM1	P09493	284 aa		13.68	□□□□□ -0.22
LUC7L3-223	ENST00000625349	CNP	P09543	421 aa	Known RBP	13.68	□□□□□ -0.22
LUC7L3-223	ENST00000625349	MYB	P10242	640 aa		13.68	□□□□□ -0.22
LUC7L3-223	ENST00000625349	KLRC2	P26717	231 aa		13.68	□□□□□ -0.22
LUC7L3-223	ENST00000625349	PSMC2	P35998	433 aa	Known RBP	13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms