RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 PALB2Q86YC2 1186 aa21.71■■□□□ 1.07
R3HCC1-210ENST00000625275 MAP4K3Q8IVH8 894 aa21.71■■□□□ 1.07
R3HCC1-210ENST00000625275 GLYCTKQ8IVS8 523 aa21.71■■□□□ 1.07
R3HCC1-210ENST00000625275 TRIML1Q8N9V2 468 aa21.71■■□□□ 1.07
R3HCC1-210ENST00000625275 PLEKHA4Q9H4M7 779 aa21.71■■□□□ 1.07
R3HCC1-210ENST00000625275 TGM5O43548 720 aa21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 RFPL2O75678 378 aa21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 SPATA31D3P0C874 917 aa21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 RPL17P18621 184 aaKnown RBP21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 HOXD13P35453 343 aa21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 NHLH1Q02575 133 aa21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 ELAVL2Q12926 359 aaKnown RBP21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 ZNF568Q3ZCX4 644 aa21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 GLRA4Q5JXX5 417 aa21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 L1TD1Q5T7N2 865 aaKnown RBP21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 FAM171A1Q5VUB5 890 aa21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 PRSS55Q6UWB4 352 aaPredicted RBP21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 SPATA31D4Q6ZUB0 917 aa21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 ZNF507Q8TCN5 953 aa21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 PIK3R5Q8WYR1 880 aa21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 ACO2Q99798 780 aaKnown RBP21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 TTPALQ9BTX7 342 aa21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 MRPL4Q9BYD3 311 aaKnown RBP21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 SMOC2Q9H3U7 446 aa21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 MAPK8IP1Q9UQF2 711 aa21.7■■□□□ 1.06
R3HCC1-210ENST00000625275 BMT2Q1RMZ1 405 aa21.69■■□□□ 1.06
R3HCC1-210ENST00000625275 SMG7Q92540 1137 aaKnown RBP21.69■■□□□ 1.06
R3HCC1-210ENST00000625275 PPP1R10Q96QC0 940 aaKnown RBP21.69■■□□□ 1.06
R3HCC1-210ENST00000625275 CDT1Q9H211 546 aa21.69■■□□□ 1.06
R3HCC1-210ENST00000625275 IKZF4Q9H2S9 585 aa21.69■■□□□ 1.06
R3HCC1-210ENST00000625275 WDR6Q9NNW5 1121 aaKnown RBP21.69■■□□□ 1.06
R3HCC1-210ENST00000625275 CLUHO75153 1309 aa21.68■■□□□ 1.06
R3HCC1-210ENST00000625275 UBE4BO95155 1302 aa21.68■■□□□ 1.06
R3HCC1-210ENST00000625275 NOTCH4Q99466 2003 aa21.68■■□□□ 1.06
R3HCC1-210ENST00000625275 PAPLNO95428 1278 aa21.68■■□□□ 1.06
R3HCC1-210ENST00000625275 GRM5P41594 1212 aa21.68■■□□□ 1.06
R3HCC1-210ENST00000625275 VCPP55072 806 aaKnown RBP21.68■■□□□ 1.06
R3HCC1-210ENST00000625275 PSMD5Q16401 504 aa21.68■■□□□ 1.06
R3HCC1-210ENST00000625275 LILRA6Q6PI73 481 aa21.68■■□□□ 1.06
R3HCC1-210ENST00000625275 NELFCDQ8IXH7 590 aa21.68■■□□□ 1.06
R3HCC1-210ENST00000625275 CEP120Q8N960 986 aa21.68■■□□□ 1.06
R3HCC1-210ENST00000625275 ZNF707Q96C28 371 aaPredicted RBP21.68■■□□□ 1.06
R3HCC1-210ENST00000625275 ACCSQ96QU6 501 aa21.68■■□□□ 1.06
R3HCC1-210ENST00000625275 PRRX2Q99811 253 aa21.68■■□□□ 1.06
R3HCC1-210ENST00000625275 CCDC94Q9BW85 323 aaPredicted RBP21.68■■□□□ 1.06
R3HCC1-210ENST00000625275 TARS2Q9BW92 718 aaKnown RBP21.68■■□□□ 1.06
R3HCC1-210ENST00000625275 GTPBP4Q9BZE4 634 aaKnown RBP21.68■■□□□ 1.06
R3HCC1-210ENST00000625275 ZDHHC7Q9NXF8 308 aa21.68■■□□□ 1.06
R3HCC1-210ENST00000625275 ANK1P16157 1881 aa21.67■■□□□ 1.06
R3HCC1-210ENST00000625275 TMEM189-UBE2V1I3L0A0 370 aa21.67■■□□□ 1.06
R3HCC1-210ENST00000625275 PDGFBP01127 241 aaPredicted RBP21.67■■□□□ 1.06
R3HCC1-210ENST00000625275 PRCPP42785 496 aa21.67■■□□□ 1.06
R3HCC1-210ENST00000625275 IER5LQ5T953 404 aa21.67■■□□□ 1.06
R3HCC1-210ENST00000625275 CEP57Q86XR8 500 aa21.67■■□□□ 1.06
R3HCC1-210ENST00000625275 PRSS33Q8NF86 280 aa21.67■■□□□ 1.06
R3HCC1-210ENST00000625275 PTPRHQ9HD43 1115 aa21.67■■□□□ 1.06
R3HCC1-210ENST00000625275 TOPORSQ9NS56 1045 aaPredicted RBP21.67■■□□□ 1.06
R3HCC1-210ENST00000625275 HNRNPDLO14979 420 aaKnown RBP21.66■■□□□ 1.06
R3HCC1-210ENST00000625275 PIGRP01833 764 aa21.66■■□□□ 1.06
R3HCC1-210ENST00000625275 CD44P16070 742 aaKnown RBP21.66■■□□□ 1.06
R3HCC1-210ENST00000625275 YARSP54577 528 aaKnown RBP21.66■■□□□ 1.06
R3HCC1-210ENST00000625275 COBLL1Q53SF7 1204 aa21.66■■□□□ 1.06
R3HCC1-210ENST00000625275 SLC39A4Q6P5W5 647 aa21.66■■□□□ 1.06
R3HCC1-210ENST00000625275 PDXDC1Q6P996 788 aa21.66■■□□□ 1.06
R3HCC1-210ENST00000625275 ZPBP2Q6X784 338 aa21.66■■□□□ 1.06
R3HCC1-210ENST00000625275 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.66■■□□□ 1.06
R3HCC1-210ENST00000625275 GUF1Q8N442 669 aaKnown RBP21.66■■□□□ 1.06
R3HCC1-210ENST00000625275 LNX1Q8TBB1 728 aaPredicted RBP21.66■■□□□ 1.06
R3HCC1-210ENST00000625275 BICD1Q96G01 975 aa21.66■■□□□ 1.06
R3HCC1-210ENST00000625275 UROC1Q96N76 676 aa21.66■■□□□ 1.06
R3HCC1-210ENST00000625275 TMEM206Q9H813 350 aa21.66■■□□□ 1.06
R3HCC1-210ENST00000625275 PIDD1Q9HB75 910 aa21.66■■□□□ 1.06
R3HCC1-210ENST00000625275 FBXW11Q9UKB1 542 aa21.66■■□□□ 1.06
R3HCC1-210ENST00000625275 EXOC7Q9UPT5 735 aa21.66■■□□□ 1.06
R3HCC1-210ENST00000625275 TISP43B9A030 160 aa21.65■■□□□ 1.06
R3HCC1-210ENST00000625275 N4BP1O75113 896 aaKnown RBP21.65■■□□□ 1.06
R3HCC1-210ENST00000625275 MCF2P10911 925 aa21.65■■□□□ 1.06
R3HCC1-210ENST00000625275 PROZP22891 400 aa21.65■■□□□ 1.06
R3HCC1-210ENST00000625275 LIG4P49917 911 aa21.65■■□□□ 1.06
R3HCC1-210ENST00000625275 KNOP1Q1ED39 458 aaKnown RBP21.65■■□□□ 1.06
R3HCC1-210ENST00000625275 DPCR1Q3MIW9 517 aa21.65■■□□□ 1.06
R3HCC1-210ENST00000625275 SYCP3Q8IZU3 236 aa21.65■■□□□ 1.06
R3HCC1-210ENST00000625275 CLSTN3Q9BQT9 956 aa21.65■■□□□ 1.06
R3HCC1-210ENST00000625275 PRKD2Q9BZL6 878 aa21.65■■□□□ 1.06
R3HCC1-210ENST00000625275 SMIM28A0A1B0GU29 152 aa21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 SYCE3A1L190 88 aa21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 ZMYND10O75800 440 aa21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 B3GAT3O94766 335 aa21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 AVPR2P30518 371 aa21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 GBP2P32456 591 aaPredicted RBP21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 CLCNKBP51801 687 aa21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 PTPN5P54829 565 aa21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 NLRP12P59046 1061 aa21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 OSTNP61366 133 aa21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 ZSCAN23Q3MJ62 389 aa21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 XKR4Q5GH76 650 aa21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 DCLRE1AQ6PJP8 1040 aa21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 SASS6Q6UVJ0 657 aa21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 MPZL3Q6UWV2 235 aa21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 ADSSL1Q8N142 457 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms