RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 PUS7LQ9H0K6 701 aaKnown RBP6.73□□□□□ -1.33
VPS29-212ENST00000621131 ALG13Q9NP73 1137 aaKnown RBP6.73□□□□□ -1.33
VPS29-212ENST00000621131 SLC5A4Q9NY91 659 aa6.73□□□□□ -1.33
VPS29-212ENST00000621131 KIAA0355O15063 1070 aa6.72□□□□□ -1.33
VPS29-212ENST00000621131 GPR32O75388 356 aa6.72□□□□□ -1.33
VPS29-212ENST00000621131 ESRRBO95718 433 aa6.72□□□□□ -1.33
VPS29-212ENST00000621131 ITGAMP11215 1152 aa6.72□□□□□ -1.33
VPS29-212ENST00000621131 CKBP12277 381 aa6.72□□□□□ -1.33
VPS29-212ENST00000621131 FGFR4P22455 802 aa6.72□□□□□ -1.33
VPS29-212ENST00000621131 SPDYE7PQ495Y7 208 aa6.72□□□□□ -1.33
VPS29-212ENST00000621131 DPY19L2P1Q6NXN4 242 aa6.72□□□□□ -1.33
VPS29-212ENST00000621131 UBE3BQ7Z3V4 1068 aa6.72□□□□□ -1.33
VPS29-212ENST00000621131 FAM43AQ8N2R8 423 aa6.72□□□□□ -1.33
VPS29-212ENST00000621131 CBARPQ8N350 705 aaPredicted RBP6.72□□□□□ -1.33
VPS29-212ENST00000621131 PPM1NQ8N819 430 aa6.72□□□□□ -1.33
VPS29-212ENST00000621131 NACC2Q96BF6 587 aa6.72□□□□□ -1.33
VPS29-212ENST00000621131 RNPEPQ9H4A4 650 aa6.72□□□□□ -1.33
VPS29-212ENST00000621131 MANSC1Q9H8J5 431 aa6.72□□□□□ -1.33
VPS29-212ENST00000621131 NOX1Q9Y5S8 564 aa6.72□□□□□ -1.33
VPS29-212ENST00000621131 ADCY10Q96PN6 1610 aa6.72□□□□□ -1.33
VPS29-212ENST00000621131 AATKQ6ZMQ8 1374 aa6.71□□□□□ -1.33
VPS29-212ENST00000621131 DDCP20711 480 aa6.71□□□□□ -1.34
VPS29-212ENST00000621131 SSH1Q8WYL5 1049 aa6.71□□□□□ -1.34
VPS29-212ENST00000621131 GSTO2Q9H4Y5 243 aa6.71□□□□□ -1.34
VPS29-212ENST00000621131 MCM8Q9UJA3 840 aa6.71□□□□□ -1.34
VPS29-212ENST00000621131 MAST3O60307 1309 aa6.71□□□□□ -1.34
VPS29-212ENST00000621131 MYBBP1AQ9BQG0 1328 aaKnown RBP6.71□□□□□ -1.34
VPS29-212ENST00000621131 SALL3Q9BXA9 1300 aa6.71□□□□□ -1.34
VPS29-212ENST00000621131 CXADRP78310 365 aa6.7□□□□□ -1.34
VPS29-212ENST00000621131 HSD11B2P80365 405 aa6.7□□□□□ -1.34
VPS29-212ENST00000621131 PRR16Q569H4 304 aa6.7□□□□□ -1.34
VPS29-212ENST00000621131 AMOTL1Q8IY63 956 aa6.7□□□□□ -1.34
VPS29-212ENST00000621131 MARS2Q96GW9 593 aaKnown RBP6.7□□□□□ -1.34
VPS29-212ENST00000621131 C7orf25Q9BPX7 421 aa6.7□□□□□ -1.34
VPS29-212ENST00000621131 SPC25Q9HBM1 224 aa6.7□□□□□ -1.34
VPS29-212ENST00000621131 INTUQ9ULD6 942 aa6.7□□□□□ -1.34
VPS29-212ENST00000621131 RUVBL1Q9Y265 456 aaKnown RBP6.7□□□□□ -1.34
VPS29-212ENST00000621131 ATP8A1Q9Y2Q0 1164 aa6.7□□□□□ -1.34
VPS29-212ENST00000621131 LRRC9Q6ZRR7 1453 aa6.7□□□□□ -1.34
VPS29-212ENST00000621131 EHBP1L1Q8N3D4 1523 aa6.7□□□□□ -1.34
VPS29-212ENST00000621131 SUPT6HQ7KZ85 1726 aaKnown RBP6.7□□□□□ -1.34
VPS29-212ENST00000621131 RAPGEF6Q8TEU7 1601 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 TCRBV7S2A1N4TA0A589 114 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 GPANK1O95872 356 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 NOMO3P69849 1222 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 CYP2A13Q16696 494 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 NOMO2Q5JPE7 1267 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 DACT2Q5SW24 774 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 PGM2L1Q6PCE3 622 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 NECAB2Q7Z6G3 386 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 FITM2Q8N6M3 262 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.69□□□□□ -1.34
VPS29-212ENST00000621131 C1orf162Q8NEQ5 155 aaPredicted RBP6.69□□□□□ -1.34
VPS29-212ENST00000621131 NTN5Q8WTR8 489 aaPredicted RBP6.69□□□□□ -1.34
VPS29-212ENST00000621131 JADE3Q92613 823 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 Q96MF0 132 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 BBC3Q96PG8 261 aaPredicted RBP6.69□□□□□ -1.34
VPS29-212ENST00000621131 PRDM13Q9H4Q3 707 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 GALNT9Q9HCQ5 603 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 USP25Q9UHP3 1055 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 KCNE5Q9UJ90 142 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 TUBD1Q9UJT1 453 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 GLI2P10070 1586 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 MTUS2Q5JR59 1369 aa6.69□□□□□ -1.34
VPS29-212ENST00000621131 ALAS1P13196 640 aa6.68□□□□□ -1.34
VPS29-212ENST00000621131 FBLP22087 321 aaKnown RBP6.68□□□□□ -1.34
VPS29-212ENST00000621131 FDXRP22570 491 aa6.68□□□□□ -1.34
VPS29-212ENST00000621131 PLA2G5P39877 138 aa6.68□□□□□ -1.34
VPS29-212ENST00000621131 CTXN1P60606 82 aa6.68□□□□□ -1.34
VPS29-212ENST00000621131 MPP3Q13368 585 aa6.68□□□□□ -1.34
VPS29-212ENST00000621131 STRIP1Q5VSL9 837 aa6.68□□□□□ -1.34
VPS29-212ENST00000621131 RHOT1Q8IXI2 618 aa6.68□□□□□ -1.34
VPS29-212ENST00000621131 DCBLD1Q8N8Z6 715 aa6.68□□□□□ -1.34
VPS29-212ENST00000621131 Q8NA96 180 aa6.68□□□□□ -1.34
VPS29-212ENST00000621131 NUP133Q8WUM0 1156 aa6.68□□□□□ -1.34
VPS29-212ENST00000621131 RNF31Q96EP0 1072 aa6.68□□□□□ -1.34
VPS29-212ENST00000621131 FAXDC2Q96IV6 333 aa6.68□□□□□ -1.34
VPS29-212ENST00000621131 HSFX1Q9UBD0 423 aa6.68□□□□□ -1.34
VPS29-212ENST00000621131 MYADML2A6NDP7 307 aa6.67□□□□□ -1.34
VPS29-212ENST00000621131 PCDHGA12O60330 932 aa6.67□□□□□ -1.34
VPS29-212ENST00000621131 NDUFS2O75306 463 aa6.67□□□□□ -1.34
VPS29-212ENST00000621131 IARSP41252 1262 aaKnown RBP6.67□□□□□ -1.34
VPS29-212ENST00000621131 SLFN5Q08AF3 891 aa6.67□□□□□ -1.34
VPS29-212ENST00000621131 CLUL1Q15846 466 aa6.67□□□□□ -1.34
VPS29-212ENST00000621131 ADGRG3Q86Y34 549 aa6.67□□□□□ -1.34
VPS29-212ENST00000621131 SIMC1Q8NDZ2 872 aa6.67□□□□□ -1.34
VPS29-212ENST00000621131 SLC9A6Q92581 669 aa6.67□□□□□ -1.34
VPS29-212ENST00000621131 UNKLQ9H9P5 680 aaKnown RBP6.67□□□□□ -1.34
VPS29-212ENST00000621131 TESQ9UGI8 421 aaKnown RBP6.67□□□□□ -1.34
VPS29-212ENST00000621131 PCDHGA9Q9Y5G4 932 aaKnown RBP6.67□□□□□ -1.34
VPS29-212ENST00000621131 PCDHGA8Q9Y5G5 932 aa6.67□□□□□ -1.34
VPS29-212ENST00000621131 PCDHGA7Q9Y5G6 932 aa6.67□□□□□ -1.34
VPS29-212ENST00000621131 PCDHGA6Q9Y5G7 932 aa6.67□□□□□ -1.34
VPS29-212ENST00000621131 PCDHGA3Q9Y5H0 932 aa6.67□□□□□ -1.34
VPS29-212ENST00000621131 SBNO2Q9Y2G9 1366 aa6.67□□□□□ -1.34
VPS29-212ENST00000621131 PRG4Q92954 1404 aaPredicted RBP6.67□□□□□ -1.34
VPS29-212ENST00000621131 DISP1Q96F81 1524 aa6.66□□□□□ -1.34
VPS29-212ENST00000621131 ZFPL1O95159 310 aa6.66□□□□□ -1.34
VPS29-212ENST00000621131 C5AR1P21730 350 aa6.66□□□□□ -1.34
VPS29-212ENST00000621131 CXCR5P32302 372 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms