RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 RMDN3Q96TC7 470 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 EHMT1Q9H9B1 1298 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 SBF2Q86WG5 1849 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 MAGEA13PA6NCF6 341 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 SPDYE2BA6NHP3 402 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 KRT16P08779 473 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 SPDYE6P0CI01 402 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 ACOT2P49753 483 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 BYSLQ13895 437 aaKnown RBP11.36□□□□□ -0.59
CDH1-214ENST00000621016 C6orf183Q5T699 404 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 INTS8Q75QN2 995 aaKnown RBP11.36□□□□□ -0.59
CDH1-214ENST00000621016 MREGQ8N565 214 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 KLHL29Q96CT2 875 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 CLMNQ96JQ2 1002 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 CEP170P1Q96L14 293 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 RASAL2Q9UJF2 1139 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 EIF3FO00303 357 aaPredicted RBP11.36□□□□□ -0.59
CDH1-214ENST00000621016 O00370 1275 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 P4HBP07237 508 aaKnown RBP11.36□□□□□ -0.59
CDH1-214ENST00000621016 RARAP10276 462 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 MYCLP1P12525 358 aaPredicted RBP11.36□□□□□ -0.59
CDH1-214ENST00000621016 PPATQ06203 517 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 MCL1Q07820 350 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 CALCOCO2Q13137 446 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 MYBPC2Q14324 1141 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 FOXB2Q5VYV0 432 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 CCT6BQ92526 530 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 RUBCNQ92622 972 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 HAUS1Q96CS2 278 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 CEP295NLQ96MC4 621 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 INTS9Q9NV88 658 aaKnown RBP11.36□□□□□ -0.59
CDH1-214ENST00000621016 PHF24Q9UPV7 400 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 FRMPD4Q14CM0 1322 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 NRAPQ86VF7 1730 aa11.36□□□□□ -0.59
CDH1-214ENST00000621016 KIAA0391O15091 583 aaKnown RBP11.35□□□□□ -0.59
CDH1-214ENST00000621016 UBTFL6P0CB48 400 aaPredicted RBP11.35□□□□□ -0.59
CDH1-214ENST00000621016 PLOD1Q02809 727 aaPredicted RBP11.35□□□□□ -0.59
CDH1-214ENST00000621016 DRP2Q13474 957 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 SGO2Q562F6 1265 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 ARHGEF16Q5VV41 709 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 CYP4F22Q6NT55 531 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 EPS8L1Q8TE68 723 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 NAP1L3Q99457 506 aaPredicted RBP11.35□□□□□ -0.59
CDH1-214ENST00000621016 CARD9Q9H257 536 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 ANKFY1Q9P2R3 1169 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 TUBGCP4Q9UGJ1 667 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 PI4K2BG5E9Z4 385 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 MRPS9P82933 396 aaKnown RBP11.35□□□□□ -0.59
CDH1-214ENST00000621016 KYNUQ16719 465 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 TKFCQ3LXA3 575 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 FOXR2Q6PJQ5 311 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 GSTA5Q7RTV2 222 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 WDR75Q8IWA0 830 aaKnown RBP11.35□□□□□ -0.59
CDH1-214ENST00000621016 WNK4Q96J92 1243 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 GBP5Q96PP8 586 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 PHF12Q96QT6 1004 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 ZSWIM1Q9BR11 485 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 KMT5AQ9NQR1 393 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 ATXN10Q9UBB4 475 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 MTRF1LQ9UGC7 380 aaKnown RBP11.35□□□□□ -0.59
CDH1-214ENST00000621016 RREB1Q92766 1687 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 MAST2Q6P0Q8 1798 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 GTPBP10A4D1E9 387 aaKnown RBP11.35□□□□□ -0.59
CDH1-214ENST00000621016 CCT8L1PA6NM43 557 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 EGFRP00533 1210 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 VCAM1P19320 739 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 MAPK4P31152 587 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 ADCY8P40145 1251 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 KLC1Q07866 573 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 EAPPQ56P03 285 aaPredicted RBP11.35□□□□□ -0.59
CDH1-214ENST00000621016 ZNF280DQ6N043 979 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 SWSAP1Q6NVH7 229 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 ISLR2Q6UXK2 745 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 CCDC80Q76M96 950 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 RAVER1Q8IY67 606 aaKnown RBP11.35□□□□□ -0.59
CDH1-214ENST00000621016 CYP4X1Q8N118 509 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 RASGEF1CQ8N431 466 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 LMO3Q8TAP4 145 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 AKT1S1Q96B36 256 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 METTL5Q9NRN9 209 aaKnown RBP11.35□□□□□ -0.59
CDH1-214ENST00000621016 CHST7Q9NS84 486 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 SLC12A6Q9UHW9 1150 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 MTUS1Q9ULD2 1270 aa11.35□□□□□ -0.59
CDH1-214ENST00000621016 TTC7AQ9ULT0 858 aaPredicted RBP11.35□□□□□ -0.59
CDH1-214ENST00000621016 RASGRF2O14827 1237 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 TRAPPC3O43617 180 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 UBOX5O94941 541 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 PLS3P13797 630 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 ADSSP30520 456 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 DUPD1Q68J44 220 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 RNF207Q6ZRF8 634 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 C9orf72Q96LT7 481 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 ATXN2Q99700 1313 aaKnown RBP11.34□□□□□ -0.59
CDH1-214ENST00000621016 C11orf70Q9BRQ4 267 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 PABPC3Q9H361 631 aaKnown RBP11.34□□□□□ -0.59
CDH1-214ENST00000621016 DMAC2Q9NW81 257 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 GABBR1Q9UBS5 961 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 CDK5RAP2Q96SN8 1893 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 BTNL10A8MVZ5 291 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 PIK3CDO00329 1044 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms