RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 GNAQP50148 359 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 RCAN1P53805 252 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 EPHB4P54760 987 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 SLURP1P55000 103 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 DAB2P98082 770 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 ZNF200P98182 395 aaPredicted RBP8.56□□□□□ -1.04
CBWD1-228ENST00000619157 PURAQ00577 322 aaKnown RBP8.56□□□□□ -1.04
CBWD1-228ENST00000619157 TMEM62Q0P6H9 643 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 MPP2Q14168 576 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 PPP2R5BQ15173 497 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 STXBP2Q15833 593 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 PLEKHN1Q494U1 663 aaPredicted RBP8.56□□□□□ -1.04
CBWD1-228ENST00000619157 NOL8Q76FK4 1167 aaKnown RBP8.56□□□□□ -1.04
CBWD1-228ENST00000619157 RUFY3Q7L099 469 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 FAM126BQ8IXS8 530 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 PCSK9Q8NBP7 692 aaKnown RBP8.56□□□□□ -1.04
CBWD1-228ENST00000619157 OR6J1Q8NGC5 347 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 SCFD2Q8WU76 684 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 IL17RAQ96F46 866 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 NCOA5Q9HCD5 579 aaKnown RBP8.56□□□□□ -1.04
CBWD1-228ENST00000619157 CHST7Q9NS84 486 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 MAP3K20Q9NYL2 800 aaKnown RBP8.56□□□□□ -1.04
CBWD1-228ENST00000619157 IMPACTQ9P2X3 320 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 DDX41Q9UJV9 622 aaKnown RBP8.56□□□□□ -1.04
CBWD1-228ENST00000619157 TBX21Q9UL17 535 aa8.56□□□□□ -1.04
CBWD1-228ENST00000619157 A0A0U1RQG5 324 aaPredicted RBP8.55□□□□□ -1.04
CBWD1-228ENST00000619157 A0A1B0GTL3 188 aa8.55□□□□□ -1.04
CBWD1-228ENST00000619157 STXBP3O00186 592 aa8.55□□□□□ -1.04
CBWD1-228ENST00000619157 KIAA0355O15063 1070 aa8.55□□□□□ -1.04
CBWD1-228ENST00000619157 SORBS3O60504 671 aa8.55□□□□□ -1.04
CBWD1-228ENST00000619157 EIF3JO75822 258 aaKnown RBP8.55□□□□□ -1.04
CBWD1-228ENST00000619157 CD4P01730 458 aa8.55□□□□□ -1.04
CBWD1-228ENST00000619157 MMP3P08254 477 aa8.55□□□□□ -1.04
CBWD1-228ENST00000619157 MYCLP12524 364 aaPredicted RBP8.55□□□□□ -1.04
CBWD1-228ENST00000619157 UBA1P22314 1058 aaKnown RBP8.55□□□□□ -1.04
CBWD1-228ENST00000619157 PDIA3P30101 505 aaKnown RBP8.55□□□□□ -1.04
CBWD1-228ENST00000619157 METAP2P50579 478 aaKnown RBP eCLIP8.55□□□□□ -1.04
CBWD1-228ENST00000619157 LSRQ86X29 649 aaPredicted RBP8.55□□□□□ -1.04
CBWD1-228ENST00000619157 RELL1Q8IUW5 271 aa8.55□□□□□ -1.04
CBWD1-228ENST00000619157 SAMD3Q8N6K7 520 aa8.55□□□□□ -1.04
CBWD1-228ENST00000619157 AFG1LQ8WV93 481 aa8.55□□□□□ -1.04
CBWD1-228ENST00000619157 KAT2BQ92831 832 aa8.55□□□□□ -1.04
CBWD1-228ENST00000619157 BADQ92934 168 aa8.55□□□□□ -1.04
CBWD1-228ENST00000619157 PHKBQ93100 1093 aa8.55□□□□□ -1.04
CBWD1-228ENST00000619157 GLT1D1Q96MS3 346 aa8.55□□□□□ -1.04
CBWD1-228ENST00000619157 INPP4AQ96PE3 977 aaPredicted RBP8.55□□□□□ -1.04
CBWD1-228ENST00000619157 CTAGE1Q96RT6 745 aa8.55□□□□□ -1.04
CBWD1-228ENST00000619157 TM6SF1Q9BZW5 370 aa8.55□□□□□ -1.04
CBWD1-228ENST00000619157 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.55□□□□□ -1.04
CBWD1-228ENST00000619157 AP5M1Q9H0R1 490 aa8.55□□□□□ -1.04
CBWD1-228ENST00000619157 SPC25Q9HBM1 224 aa8.55□□□□□ -1.04
CBWD1-228ENST00000619157 RBM28Q9NW13 759 aaKnown RBP8.55□□□□□ -1.04
CBWD1-228ENST00000619157 UMODL1Q5DID0 1318 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 KIAA1217Q5T5P2 1943 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 SCN10AQ9Y5Y9 1956 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 ANKRD33BA6NCL7 494 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 NKRFO15226 690 aaKnown RBP eCLIP8.54□□□□□ -1.04
CBWD1-228ENST00000619157 EDIL3O43854 480 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 MYL3P08590 195 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 CLTBP09497 229 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 PSMA5P28066 241 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 ITGA7Q13683 1181 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 HSDL1Q3SXM5 330 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 C9orf50Q5SZB4 431 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 OVOS1Q6IE37 1185 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 HEATR3Q7Z4Q2 680 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 PGBD1Q96JS3 809 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 TRPV6Q9H1D0 765 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 PSTPIP2Q9H939 334 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 TMEM260Q9NX78 707 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 GFOD1Q9NXC2 390 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 BARHL2Q9NY43 387 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 SEC63Q9UGP8 760 aaKnown RBP8.54□□□□□ -1.04
CBWD1-228ENST00000619157 PCDHB14Q9Y5E9 798 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 CHD9Q3L8U1 2897 aa8.54□□□□□ -1.04
CBWD1-228ENST00000619157 B4GALT4O60513 344 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 ATP9AO75110 1047 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 CABYRO75952 493 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 GGPS1O95749 300 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 GH1P01241 217 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 IGFBP6P24592 240 aaPredicted RBP8.53□□□□□ -1.04
CBWD1-228ENST00000619157 CCND2P30279 289 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 ICAM3P32942 547 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 CCT2P78371 535 aaKnown RBP8.53□□□□□ -1.04
CBWD1-228ENST00000619157 KCNA1Q09470 495 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 TRAF1Q13077 416 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 PFKFB3Q16875 520 aaPredicted RBP8.53□□□□□ -1.04
CBWD1-228ENST00000619157 SYNE3Q6ZMZ3 975 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 C16orf59Q7L2K0 433 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 FERMT3Q86UX7 667 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 SMARCC2Q8TAQ2 1214 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 CRYGNQ8WXF5 182 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 JMJD8Q96S16 334 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 WNT8AQ9H1J5 351 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 ALDH8A1Q9H2A2 487 aaPredicted RBP8.53□□□□□ -1.04
CBWD1-228ENST00000619157 RIC8AQ9NPQ8 531 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 TRMT13Q9NUP7 481 aaKnown RBP8.53□□□□□ -1.04
CBWD1-228ENST00000619157 AP5S1Q9NUS5 200 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 NAP1L2Q9ULW6 460 aaPredicted RBP8.53□□□□□ -1.04
CBWD1-228ENST00000619157 PLA2G2DQ9UNK4 145 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms