RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 ATMINO43313 823 aaPredicted RBP14.69□□□□□ -0.06
CIITA-213ENST00000618327 KPNA6O60684 536 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 BRD2P25440 801 aaKnown RBP14.69□□□□□ -0.06
CIITA-213ENST00000618327 CLK2P49760 499 aaKnown RBP14.69□□□□□ -0.06
CIITA-213ENST00000618327 PSMD6Q15008 389 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 PCSK9Q8NBP7 692 aaKnown RBP14.69□□□□□ -0.06
CIITA-213ENST00000618327 WNK4Q96J92 1243 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 MS4A14Q96JA4 679 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 GMLQ99445 158 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 CAPS2Q9BXY5 557 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 FAM49BQ9NUQ9 324 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 SGPL1O95470 568 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 LGALS2P05162 132 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 AKR1A1P14550 325 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 CDR2Q01850 454 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 CC2D1AQ6P1N0 951 aaPredicted RBP14.69□□□□□ -0.06
CIITA-213ENST00000618327 CCDC137Q6PK04 289 aaKnown RBP14.69□□□□□ -0.06
CIITA-213ENST00000618327 ZPBP2Q6X784 338 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 WDR49Q8IV35 697 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 MTMR8Q96EF0 704 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 OSMRQ99650 979 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 PORCNQ9H237 461 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 DNAJC17Q9NVM6 304 aaKnown RBP14.69□□□□□ -0.06
CIITA-213ENST00000618327 I3L4J1 428 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 SART1O43290 800 aaKnown RBP14.69□□□□□ -0.06
CIITA-213ENST00000618327 CHADLQ6NUI6 762 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 MCEEQ96PE7 176 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 USP20Q9Y2K6 914 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 ALG6Q9Y672 507 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 LTBP3Q9NS15 1303 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 EGFRP00533 1210 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 PDGFRAP16234 1089 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 PNPLA4P41247 253 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 TAF6P49848 677 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 CDH6P55285 790 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 TBX2Q13207 712 aaPredicted RBP14.69□□□□□ -0.06
CIITA-213ENST00000618327 SPATS2Q86XZ4 545 aaKnown RBP14.69□□□□□ -0.06
CIITA-213ENST00000618327 GTF3C4Q9UKN8 822 aa14.69□□□□□ -0.06
CIITA-213ENST00000618327 CPB1P15086 417 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 DMTNQ08495 405 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.68□□□□□ -0.06
CIITA-213ENST00000618327 CENPUQ71F23 418 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 DHX35Q9H5Z1 703 aaKnown RBP14.68□□□□□ -0.06
CIITA-213ENST00000618327 DUOX1Q9NRD9 1551 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 ZBBXA8MT70 800 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 ACKR2O00590 384 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 CYP2C19P33261 490 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 BCAR1P56945 870 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 NME3Q13232 169 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 GEN1Q17RS7 908 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 SHCBP1Q8NEM2 672 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 C1orf54Q8WWF1 131 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 THAP2Q9H0W7 228 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 AMACRQ9UHK6 382 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 FAM187AA6NFU0 413 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 GPR182O15218 404 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 CREB3O43889 395 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 ZWINTO95229 277 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 CYP11B1P15538 503 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 ACAD10Q6JQN1 1059 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 LRRC55Q6ZSA7 311 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 GPR142Q7Z601 462 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 GOLPH3Q9H4A6 298 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 STK38LQ9Y2H1 464 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 COMTP21964 271 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 SLCO1A2P46721 670 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 EIF3BP55884 814 aaKnown RBP14.68□□□□□ -0.06
CIITA-213ENST00000618327 RRP1BQ14684 758 aaKnown RBP14.68□□□□□ -0.06
CIITA-213ENST00000618327 RGMBQ6NW40 437 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 GSPT2Q8IYD1 628 aaKnown RBP14.68□□□□□ -0.06
CIITA-213ENST00000618327 CHORDC1Q9UHD1 332 aaPredicted RBP14.68□□□□□ -0.06
CIITA-213ENST00000618327 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.68□□□□□ -0.06
CIITA-213ENST00000618327 FAN1Q9Y2M0 1017 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 DUSP10Q9Y6W6 482 aa14.68□□□□□ -0.06
CIITA-213ENST00000618327 SLC15A5A6NIM6 579 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 TISP43B9A030 160 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 CXCL8P10145 99 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 GNL1P36915 607 aaPredicted RBP14.67□□□□□ -0.06
CIITA-213ENST00000618327 PIGHQ14442 188 aaPredicted RBP14.67□□□□□ -0.06
CIITA-213ENST00000618327 EFHC2Q5JST6 749 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 EP400NLQ6ZTU2 488 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 ZNF571Q7Z3V5 609 aaPredicted RBP14.67□□□□□ -0.06
CIITA-213ENST00000618327 PARD3BQ8TEW8 1205 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 DHX38Q92620 1227 aaKnown RBP14.67□□□□□ -0.06
CIITA-213ENST00000618327 LACRTQ9GZZ8 138 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 KLC2Q9H0B6 622 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 ANKRD63C9JTQ0 380 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 RASGRF2O14827 1237 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 TADA2AO75478 443 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 MMEP08473 750 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 GTF2BQ00403 316 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 PYROXD1Q8WU10 500 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 FAF2Q96CS3 445 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 GBP5Q96PP8 586 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 DONSONQ9NYP3 566 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 MYL6P60660 151 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 MFSD10Q14728 455 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 LRRC1Q9BTT6 524 aa14.67□□□□□ -0.06
CIITA-213ENST00000618327 PI4K2BG5E9Z4 385 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 ACSL3O95573 720 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms