RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 UNC13DQ70J99 1090 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 TTC5Q8N0Z6 440 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 FANCBQ8NB91 859 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 PLEKHO2Q8TD55 490 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 HELQQ8TDG4 1101 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 NUDT16Q96DE0 195 aaKnown RBP7.78□□□□□ -1.16
PDE6A-205ENST00000617647 CCDC134Q9H6E4 229 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 KCNMB3Q9NPA1 279 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 C12orf4Q9NQ89 552 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 DISC1Q9NRI5 854 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 SEPT3Q9UH03 358 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 NAALADL1Q9UQQ1 740 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 CAB39Q9Y376 341 aaPredicted RBP7.78□□□□□ -1.16
PDE6A-205ENST00000617647 FCER1AP12319 257 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 PDE6AP16499 860 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 ZNF12P17014 697 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 NCF2P19878 526 aaPredicted RBP7.78□□□□□ -1.16
PDE6A-205ENST00000617647 TAC1P20366 129 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 STT3AP46977 705 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 TMPRSS15P98073 1019 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 CARTPTQ16568 116 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 ZNF618Q5T7W0 954 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 TTI2Q6NXR4 508 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 MPRIPQ6WCQ1 1025 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 CLNKQ7Z7G1 428 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 CATSPER1Q8NEC5 780 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 SCFD2Q8WU76 684 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 RPGRQ92834 1020 aaKnown RBP7.78□□□□□ -1.16
PDE6A-205ENST00000617647 WNK4Q96J92 1243 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 CLPTM1LQ96KA5 538 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 TMEM120AQ9BXJ8 343 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 RAB34Q9BZG1 259 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 KIAA1586Q9HCI6 787 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 TRPV5Q9NQA5 729 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 PIH1D3Q9NQM4 214 aaKnown RBP7.78□□□□□ -1.16
PDE6A-205ENST00000617647 TXNDC16Q9P2K2 825 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 STRIP2Q9ULQ0 834 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 TTC7AQ9ULT0 858 aaPredicted RBP7.78□□□□□ -1.16
PDE6A-205ENST00000617647 KNDC1Q76NI1 1749 aa7.78□□□□□ -1.16
PDE6A-205ENST00000617647 ZSCAN5BA6NJL1 495 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 GOLGA8JA6NMD2 632 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 FCHO1O14526 889 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 MT-ND3P03897 115 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 ACVR2BQ13705 512 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 STAT4Q14765 748 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 FXNQ16595 210 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 C15orf59Q2T9L4 293 aaPredicted RBP7.77□□□□□ -1.17
PDE6A-205ENST00000617647 SMU1Q2TAY7 513 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 SPDYCQ5MJ68 293 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 CYB5RLQ6IPT4 315 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 RAPH1Q70E73 1250 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 NET1Q7Z628 596 aaPredicted RBP7.77□□□□□ -1.17
PDE6A-205ENST00000617647 AMIGO2Q86SJ2 522 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 ZNF654Q8IZM8 581 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 CENPSQ8N2Z9 138 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 TSPAN14Q8NG11 270 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 RBM15Q96T37 977 aaKnown RBP eCLIP7.77□□□□□ -1.17
PDE6A-205ENST00000617647 VTA1Q9NP79 307 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 SYNGAP1Q96PV0 1343 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 CCDC195A0A1B0GUA6 201 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 CAPN8A6NHC0 703 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 MEI4A8MW99 385 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 WASLO00401 505 aaPredicted RBP7.77□□□□□ -1.17
PDE6A-205ENST00000617647 ZNF862O60290 1169 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 EYA4O95677 639 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 FYNP06241 537 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 MYL2P10916 166 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 GYS1P13807 737 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 TATP17735 454 aaPredicted RBP7.77□□□□□ -1.17
PDE6A-205ENST00000617647 CALML3P27482 149 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 MTMR2Q13614 643 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 GIT2Q14161 759 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 MAPK11Q15759 364 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 LETM2Q2VYF4 491 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 FIGNQ5HY92 759 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 RSBN1Q5VWQ0 802 aaPredicted RBP7.77□□□□□ -1.17
PDE6A-205ENST00000617647 ARL6IP4Q66PJ3 421 aaKnown RBP7.77□□□□□ -1.17
PDE6A-205ENST00000617647 RAVER1Q8IY67 606 aaKnown RBP7.77□□□□□ -1.17
PDE6A-205ENST00000617647 GRK7Q8WTQ7 553 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 TAMM41Q96BW9 452 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 OTUD5Q96G74 571 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 KLF6Q99612 283 aaPredicted RBP7.77□□□□□ -1.17
PDE6A-205ENST00000617647 TUT1Q9H6E5 874 aaKnown RBP7.77□□□□□ -1.17
PDE6A-205ENST00000617647 ZNF287Q9HBT7 754 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 FBXO6Q9NRD1 293 aaPredicted RBP7.77□□□□□ -1.17
PDE6A-205ENST00000617647 CNNM1Q9NRU3 951 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 DIS3Q9Y2L1 958 aaKnown RBP7.77□□□□□ -1.17
PDE6A-205ENST00000617647 ANGPTL3Q9Y5C1 460 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 COL4A3BPQ9Y5P4 624 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 RFX7Q2KHR2 1363 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 SNTNA6NMZ2 147 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 ZNF839A8K0R7 811 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 PP2D1A8MPX8 630 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 CCRL2O00421 344 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 SERPINI2O75830 405 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 GABBR2O75899 941 aa7.77□□□□□ -1.17
PDE6A-205ENST00000617647 MZF1P28698 734 aaPredicted RBP7.77□□□□□ -1.17
PDE6A-205ENST00000617647 RPL21P46778 160 aaKnown RBP7.77□□□□□ -1.17
PDE6A-205ENST00000617647 IREB2P48200 963 aaKnown RBP7.77□□□□□ -1.17
PDE6A-205ENST00000617647 TPTEP56180 551 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms