RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 INHBEP58166 350 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 LACTBP83111 547 aaPredicted RBP8.35□□□□□ -1.07
NEK3-207ENST00000617054 SREBF2Q12772 1141 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 TRPC3Q13507 836 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 WHAMMP3Q1A5X7 153 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 SLC10A6Q3KNW5 377 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 WDR72Q3MJ13 1102 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 MEI1Q5TIA1 1274 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 DPH6Q7L8W6 267 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 APBA2Q99767 749 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 OSBPL7Q9BZF2 842 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 PRMT7Q9NVM4 692 aaPredicted RBP8.35□□□□□ -1.07
NEK3-207ENST00000617054 RNF186Q9NXI6 227 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 SNTG2Q9NY99 539 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 KLK14Q9P0G3 267 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 TNFSF13BQ9Y275 285 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 ARIH1Q9Y4X5 557 aaPredicted RBP8.35□□□□□ -1.07
NEK3-207ENST00000617054 PCDHGC5Q9Y5F6 944 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 NPTXRO95502 500 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 CCND3P30281 292 aaPredicted RBP8.35□□□□□ -1.07
NEK3-207ENST00000617054 HOXA11P31270 313 aaPredicted RBP8.35□□□□□ -1.07
NEK3-207ENST00000617054 ABCD1P33897 745 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 TM4SF4P48230 202 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 PSEN2P49810 448 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 MESDQ14696 234 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 SKIV2LQ15477 1246 aaKnown RBP8.35□□□□□ -1.07
NEK3-207ENST00000617054 FAM47CQ5HY64 1035 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 PPP1R15BQ5SWA1 713 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 CCDC181Q5TID7 509 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 GSPT2Q8IYD1 628 aaKnown RBP8.35□□□□□ -1.07
NEK3-207ENST00000617054 LRRC57Q8N9N7 239 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 TRIP11Q15643 1979 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 ANO9A1A5B4 782 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 ZEB2O60315 1214 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 CLTAP09496 248 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 CTSHP09668 335 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 MCCD1P59942 119 aaPredicted RBP8.35□□□□□ -1.07
NEK3-207ENST00000617054 CDR2Q01850 454 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 GCNT1Q02742 428 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 ZNF211Q13398 564 aaPredicted RBP8.35□□□□□ -1.07
NEK3-207ENST00000617054 NAA35Q5VZE5 725 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 CATSPER4Q7RTX7 472 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 PEX26Q7Z412 305 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 WDR49Q8IV35 697 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 C1orf127Q8N9H9 656 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 AP1M1Q9BXS5 423 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 ADAMTS10Q9H324 1103 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 SIX4Q9UIU6 781 aa8.35□□□□□ -1.07
NEK3-207ENST00000617054 ANKRD62A6NC57 917 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 THAP12O43422 761 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 HOXD8P13378 290 aaPredicted RBP8.34□□□□□ -1.07
NEK3-207ENST00000617054 GNA15P30679 374 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 VSNL1P62760 191 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 PURAQ00577 322 aaKnown RBP8.34□□□□□ -1.07
NEK3-207ENST00000617054 CACNB2Q08289 660 aaPredicted RBP8.34□□□□□ -1.07
NEK3-207ENST00000617054 C10orf76Q5T2E6 689 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 C7orf31Q8N865 590 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 RBBP8NLQ8NC74 664 aaPredicted RBP8.34□□□□□ -1.07
NEK3-207ENST00000617054 SMC1BQ8NDV3 1235 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 WNT8BQ93098 351 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 CALR3Q96L12 384 aaKnown RBP8.34□□□□□ -1.07
NEK3-207ENST00000617054 LRRC1Q9BTT6 524 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 NXF3Q9H4D5 531 aaKnown RBP8.34□□□□□ -1.07
NEK3-207ENST00000617054 RBM12Q9NTZ6 932 aaKnown RBP8.34□□□□□ -1.07
NEK3-207ENST00000617054 HMGXB4Q9UGU5 601 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 FARP1Q9Y4F1 1045 aaPredicted RBP8.34□□□□□ -1.07
NEK3-207ENST00000617054 PPME1Q9Y570 386 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 NRCAMQ92823 1304 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 SIP14410 1827 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 A0A1B0GUA9 196 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 PPEF2O14830 753 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 KIAA0391O15091 583 aaKnown RBP8.34□□□□□ -1.07
NEK3-207ENST00000617054 CEP104O60308 925 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 ASS1P00966 412 aaKnown RBP8.34□□□□□ -1.07
NEK3-207ENST00000617054 BRD2P25440 801 aaKnown RBP8.34□□□□□ -1.07
NEK3-207ENST00000617054 MARCKSL1P49006 195 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 RPS6KA1Q15418 735 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 ZNF699Q32M78 642 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 SPATA4Q8NEY3 305 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 ZNF653Q96CK0 615 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 ZMAT2Q96NC0 199 aaKnown RBP8.34□□□□□ -1.07
NEK3-207ENST00000617054 ZSWIM1Q9BR11 485 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 IMPG2Q9BZV3 1241 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 XYLT2Q9H1B5 865 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 ISCUQ9H1K1 167 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 CISHQ9NSE2 258 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 CACNG4Q9UBN1 327 aa8.34□□□□□ -1.07
NEK3-207ENST00000617054 RTN2O75298 545 aa8.34□□□□□ -1.08
NEK3-207ENST00000617054 TMEM253P0C7T8 217 aa8.34□□□□□ -1.08
NEK3-207ENST00000617054 H2AFXP16104 143 aaPredicted RBP8.34□□□□□ -1.08
NEK3-207ENST00000617054 CPT1AP50416 773 aa8.34□□□□□ -1.08
NEK3-207ENST00000617054 GPC5P78333 572 aa8.34□□□□□ -1.08
NEK3-207ENST00000617054 NT5DC3Q86UY8 548 aa8.34□□□□□ -1.08
NEK3-207ENST00000617054 GPR161Q8N6U8 529 aaKnown RBP8.34□□□□□ -1.08
NEK3-207ENST00000617054 RFFLQ8WZ73 363 aa8.34□□□□□ -1.08
NEK3-207ENST00000617054 RABGGTAQ92696 567 aa8.34□□□□□ -1.08
NEK3-207ENST00000617054 C18orf25Q96B23 403 aaPredicted RBP8.34□□□□□ -1.08
NEK3-207ENST00000617054 ANKRD36BP1Q96IX9 119 aa8.34□□□□□ -1.08
NEK3-207ENST00000617054 CAPNS2Q96L46 248 aa8.34□□□□□ -1.08
NEK3-207ENST00000617054 NUP85Q9BW27 656 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms