RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 MBD3O95983 291 aa34.42■■■■□ 3.1
FMR1-216ENST00000616614 FGFR3P22607 806 aa34.42■■■■□ 3.1
FMR1-216ENST00000616614 CA8P35219 290 aa34.42■■■■□ 3.1
FMR1-216ENST00000616614 STIM1Q13586 685 aa34.42■■■■□ 3.1
FMR1-216ENST00000616614 CEP57Q86XR8 500 aa34.42■■■■□ 3.1
FMR1-216ENST00000616614 WDR49Q8IV35 697 aa34.42■■■■□ 3.1
FMR1-216ENST00000616614 CGRRF1Q99675 332 aa34.42■■■■□ 3.1
FMR1-216ENST00000616614 MRPL17Q9NRX2 175 aaKnown RBP34.42■■■■□ 3.1
FMR1-216ENST00000616614 SIX4Q9UIU6 781 aa34.42■■■■□ 3.1
FMR1-216ENST00000616614 URODP06132 367 aa34.41■■■■□ 3.1
FMR1-216ENST00000616614 TKTP29401 623 aaKnown RBP34.41■■■■□ 3.1
FMR1-216ENST00000616614 ELAVL2Q12926 359 aaKnown RBP34.41■■■■□ 3.1
FMR1-216ENST00000616614 DUSP6Q16828 381 aa34.41■■■■□ 3.1
FMR1-216ENST00000616614 ZC3H3Q8IXZ2 948 aaKnown RBP34.41■■■■□ 3.1
FMR1-216ENST00000616614 PARD3BQ8TEW8 1205 aa34.41■■■■□ 3.1
FMR1-216ENST00000616614 CACTINQ8WUQ7 758 aaKnown RBP34.41■■■■□ 3.1
FMR1-216ENST00000616614 TTPALQ9BTX7 342 aa34.41■■■■□ 3.1
FMR1-216ENST00000616614 FRMD4BQ9Y2L6 1034 aa34.41■■■■□ 3.1
FMR1-216ENST00000616614 XIRP2A4UGR9 3374 aa34.41■■■■□ 3.1
FMR1-216ENST00000616614 LINC01565O15544 149 aa34.4■■■■□ 3.1
FMR1-216ENST00000616614 ITGB3P05106 788 aa34.4■■■■□ 3.1
FMR1-216ENST00000616614 RPL13P26373 211 aaKnown RBP34.4■■■■□ 3.1
FMR1-216ENST00000616614 AARSP49588 968 aaKnown RBP eCLIP34.4■■■■□ 3.1
FMR1-216ENST00000616614 DLG4P78352 724 aa34.4■■■■□ 3.1
FMR1-216ENST00000616614 RBM10P98175 930 aaKnown RBP34.4■■■■□ 3.1
FMR1-216ENST00000616614 COL19A1Q14993 1142 aa34.4■■■■□ 3.1
FMR1-216ENST00000616614 KIAA1841Q6NSI8 718 aa34.4■■■■□ 3.1
FMR1-216ENST00000616614 PRSS55Q6UWB4 352 aaPredicted RBP34.4■■■■□ 3.1
FMR1-216ENST00000616614 NELFBQ8WX92 580 aa34.4■■■■□ 3.1
FMR1-216ENST00000616614 RIN2Q8WYP3 895 aaPredicted RBP34.4■■■■□ 3.1
FMR1-216ENST00000616614 SUSD3Q96L08 255 aa34.4■■■■□ 3.1
FMR1-216ENST00000616614 DUSP9Q99956 384 aaKnown RBP34.4■■■■□ 3.1
FMR1-216ENST00000616614 CTNND2Q9UQB3 1225 aa34.4■■■■□ 3.1
FMR1-216ENST00000616614 SPTBN5Q9NRC6 3674 aaKnown RBP34.4■■■■□ 3.1
FMR1-216ENST00000616614 LRRIQ3A6PVS8 624 aaPredicted RBP34.39■■■■□ 3.1
FMR1-216ENST00000616614 SLC34A2O95436 690 aa34.39■■■■□ 3.1
FMR1-216ENST00000616614 CNPP09543 421 aaKnown RBP34.39■■■■□ 3.1
FMR1-216ENST00000616614 PPP1R2P41236 205 aa34.39■■■■□ 3.1
FMR1-216ENST00000616614 LILRA4P59901 499 aa34.39■■■■□ 3.1
FMR1-216ENST00000616614 LRRC63Q05C16 580 aa34.39■■■■□ 3.1
FMR1-216ENST00000616614 SKIV2LQ15477 1246 aaKnown RBP34.39■■■■□ 3.1
FMR1-216ENST00000616614 DUOXA2Q1HG44 320 aa34.39■■■■□ 3.1
FMR1-216ENST00000616614 TTI2Q6NXR4 508 aa34.39■■■■□ 3.1
FMR1-216ENST00000616614 PDZRN4Q6ZMN7 1036 aaPredicted RBP34.39■■■■□ 3.1
FMR1-216ENST00000616614 RBM43Q6ZSC3 357 aaKnown RBP34.39■■■■□ 3.1
FMR1-216ENST00000616614 CSGALNACT2Q8N6G5 542 aa34.39■■■■□ 3.1
FMR1-216ENST00000616614 VN1R2Q8NFZ6 395 aa34.39■■■■□ 3.1
FMR1-216ENST00000616614 KLHL5Q96PQ7 755 aa34.39■■■■□ 3.1
FMR1-216ENST00000616614 FNBP1Q96RU3 617 aa34.39■■■■□ 3.1
FMR1-216ENST00000616614 TSG101Q99816 390 aa34.39■■■■□ 3.1
FMR1-216ENST00000616614 MAPK13O15264 365 aa34.38■■■■□ 3.09
FMR1-216ENST00000616614 TRAPPC3O43617 180 aa34.38■■■■□ 3.09
FMR1-216ENST00000616614 CLASP2O75122 1294 aaKnown RBP34.38■■■■□ 3.09
FMR1-216ENST00000616614 TMEM191BP0C7N4 346 aa34.38■■■■□ 3.09
FMR1-216ENST00000616614 TNNI1P19237 187 aa34.38■■■■□ 3.09
FMR1-216ENST00000616614 POLR2BP30876 1174 aaKnown RBP34.38■■■■□ 3.09
FMR1-216ENST00000616614 CLDN10P78369 228 aa34.38■■■■□ 3.09
FMR1-216ENST00000616614 BMS1Q14692 1282 aaKnown RBP34.38■■■■□ 3.09
FMR1-216ENST00000616614 C1orf220Q5T0J3 134 aa34.38■■■■□ 3.09
FMR1-216ENST00000616614 LNX1Q8TBB1 728 aaPredicted RBP34.38■■■■□ 3.09
FMR1-216ENST00000616614 BORCS6Q96GS4 357 aa34.38■■■■□ 3.09
FMR1-216ENST00000616614 RXFP1Q9HBX9 757 aa34.38■■■■□ 3.09
FMR1-216ENST00000616614 AGAP1Q9UPQ3 857 aa34.38■■■■□ 3.09
FMR1-216ENST00000616614 RPL17P18621 184 aaKnown RBP34.38■■■■□ 3.09
FMR1-216ENST00000616614 STX17P56962 302 aa34.38■■■■□ 3.09
FMR1-216ENST00000616614 KCNC3Q14003 757 aa34.38■■■■□ 3.09
FMR1-216ENST00000616614 CTC1Q2NKJ3 1217 aa34.38■■■■□ 3.09
FMR1-216ENST00000616614 FAM186BQ8IYM0 893 aa34.38■■■■□ 3.09
FMR1-216ENST00000616614 ANKRD36BP1Q96IX9 119 aa34.38■■■■□ 3.09
FMR1-216ENST00000616614 MED15Q96RN5 788 aa34.38■■■■□ 3.09
FMR1-216ENST00000616614 CETN3O15182 167 aa34.37■■■■□ 3.09
FMR1-216ENST00000616614 TEX28O15482 410 aa34.37■■■■□ 3.09
FMR1-216ENST00000616614 PSMC2P35998 433 aaKnown RBP34.37■■■■□ 3.09
FMR1-216ENST00000616614 FKBP3Q00688 224 aaKnown RBP34.37■■■■□ 3.09
FMR1-216ENST00000616614 TRAPPC11Q7Z392 1133 aa34.37■■■■□ 3.09
FMR1-216ENST00000616614 PIK3R5Q8WYR1 880 aa34.37■■■■□ 3.09
FMR1-216ENST00000616614 PPP2R3CQ969Q6 453 aa34.37■■■■□ 3.09
FMR1-216ENST00000616614 ITGA11Q9UKX5 1188 aa34.37■■■■□ 3.09
FMR1-216ENST00000616614 M0QZQ0 153 aa34.36■■■■□ 3.09
FMR1-216ENST00000616614 GLP2RO95838 553 aa34.36■■■■□ 3.09
FMR1-216ENST00000616614 ADAM15Q13444 863 aa34.36■■■■□ 3.09
FMR1-216ENST00000616614 DPCR1Q3MIW9 517 aa34.36■■■■□ 3.09
FMR1-216ENST00000616614 GPR65Q8IYL9 337 aa34.36■■■■□ 3.09
FMR1-216ENST00000616614 EFHBQ8N7U6 833 aa34.36■■■■□ 3.09
FMR1-216ENST00000616614 TMC2Q8TDI7 906 aa34.36■■■■□ 3.09
FMR1-216ENST00000616614 TMEM63CQ9P1W3 806 aa34.36■■■■□ 3.09
FMR1-216ENST00000616614 SSX2IPQ9Y2D8 614 aa34.36■■■■□ 3.09
FMR1-216ENST00000616614 CST3P01034 146 aaPredicted RBP34.35■■■■□ 3.09
FMR1-216ENST00000616614 TNNC2P02585 160 aa34.35■■■■□ 3.09
FMR1-216ENST00000616614 LTBRP36941 435 aa34.35■■■■□ 3.09
FMR1-216ENST00000616614 DLX2Q07687 328 aaPredicted RBP34.35■■■■□ 3.09
FMR1-216ENST00000616614 PAK1Q13153 545 aa34.35■■■■□ 3.09
FMR1-216ENST00000616614 PABPC5Q96DU9 382 aaKnown RBP34.35■■■■□ 3.09
FMR1-216ENST00000616614 PCDHB8Q9UN66 801 aa34.35■■■■□ 3.09
FMR1-216ENST00000616614 TIMM13Q9Y5L4 95 aaPredicted RBP34.35■■■■□ 3.09
FMR1-216ENST00000616614 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP34.34■■■■□ 3.09
FMR1-216ENST00000616614 KRT19P08727 400 aa34.34■■■■□ 3.09
FMR1-216ENST00000616614 VAMP7P51809 220 aa34.34■■■■□ 3.09
FMR1-216ENST00000616614 RSPO2Q6UXX9 243 aaPredicted RBP34.34■■■■□ 3.09
FMR1-216ENST00000616614 CDCA3Q99618 268 aaPredicted RBP34.34■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms