RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 PRR5LQ6MZQ0 368 aa12.46□□□□□ -0.42
CDH5-208ENST00000614547 SCARA5Q6ZMJ2 495 aa12.46□□□□□ -0.42
CDH5-208ENST00000614547 SPATA24Q86W54 205 aa12.46□□□□□ -0.42
CDH5-208ENST00000614547 TEX9Q8N6V9 391 aa12.46□□□□□ -0.42
CDH5-208ENST00000614547 SNRNP27Q8WVK2 155 aaKnown RBP12.46□□□□□ -0.42
CDH5-208ENST00000614547 TEKT1Q969V4 418 aa12.46□□□□□ -0.42
CDH5-208ENST00000614547 IMPG2Q9BZV3 1241 aa12.46□□□□□ -0.42
CDH5-208ENST00000614547 SAE1Q9UBE0 346 aaPredicted RBP12.46□□□□□ -0.42
CDH5-208ENST00000614547 FOSP01100 380 aaPredicted RBP12.45□□□□□ -0.42
CDH5-208ENST00000614547 MAN1A1P33908 653 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 BRDTQ58F21 947 aaPredicted RBP12.45□□□□□ -0.42
CDH5-208ENST00000614547 OLFML2BQ68BL8 750 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 C3orf62Q6ZUJ4 267 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 HAUS6Q7Z4H7 955 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 RASSF3Q86WH2 238 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 MAB21L3Q8N8X9 362 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 ZSWIM2Q8NEG5 633 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 ART4Q93070 314 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 NMD3Q96D46 503 aaKnown RBP12.45□□□□□ -0.42
CDH5-208ENST00000614547 SYT15Q9BQS2 421 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 DCLRE1BQ9H816 532 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 NMRK1Q9NWW6 199 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 NDE1Q9NXR1 346 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 CHKBQ9Y259 395 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 SLIT3O75094 1523 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 GGPS1O95749 300 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 ALAS1P13196 640 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 ABL2P42684 1182 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 GRAPQ13588 217 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 FASTKD3Q14CZ7 662 aaKnown RBP12.45□□□□□ -0.42
CDH5-208ENST00000614547 IZUMO2Q6UXV1 221 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 DSTYKQ6XUX3 929 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 SLFN11Q7Z7L1 901 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 TBC1D16Q8TBP0 767 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 GRAPLQ8TC17 118 aaPredicted RBP12.45□□□□□ -0.42
CDH5-208ENST00000614547 MIPOL1Q8TD10 442 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 FAM20AQ96MK3 541 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 COL1A1P02452 1464 aaPredicted RBP12.45□□□□□ -0.42
CDH5-208ENST00000614547 LOC100653049A0A140TA62 436 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 KRT34O76011 436 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 STK10O94804 968 aaKnown RBP12.45□□□□□ -0.42
CDH5-208ENST00000614547 LINGO3P0C6S8 592 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 NCF2P19878 526 aaPredicted RBP12.45□□□□□ -0.42
CDH5-208ENST00000614547 TUBP50607 506 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 ANO7Q6IWH7 933 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 SCYL2Q6P3W7 929 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 TAS1R2Q8TE23 839 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 TMEM121Q9BTD3 319 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 MAK16Q9BXY0 300 aaKnown RBP12.45□□□□□ -0.42
CDH5-208ENST00000614547 VCX3BQ9H321 246 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 IFT122Q9HBG6 1241 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 VCX3AQ9NNX9 186 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 ARHGEF3Q9NR81 526 aa12.45□□□□□ -0.42
CDH5-208ENST00000614547 SPATA31C1P0DKV0 1188 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 CYP11B1P15538 503 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 SOX10P56693 466 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 SLC1A5Q15758 541 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 PPP1R15BQ5SWA1 713 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 PLA2G4FQ68DD2 849 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 OGFOD1Q8N543 542 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 EFCAB3Q8N7B9 438 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 PPP1R36Q96LQ0 422 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 TMOD2Q9NZR1 351 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 BTNL10A8MVZ5 291 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 TCP10L2B9ZVM9 353 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 H7C0C1 242 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 RAD17O75943 681 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 CETPP11597 493 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 PECAM1P16284 738 aaPredicted RBP12.44□□□□□ -0.42
CDH5-208ENST00000614547 EIF2AK2P19525 551 aaKnown RBP12.44□□□□□ -0.42
CDH5-208ENST00000614547 ATP5OP48047 213 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 COBLL1Q53SF7 1204 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 RABGAP1LQ5R372 815 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 ZNF720Q7Z2F6 126 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 RFX6Q8HWS3 928 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 ARID3BQ8IVW6 561 aaPredicted RBP12.44□□□□□ -0.42
CDH5-208ENST00000614547 RBBP8NLQ8NC74 664 aaPredicted RBP12.44□□□□□ -0.42
CDH5-208ENST00000614547 ACAP3Q96P50 834 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 DDX4Q9NQI0 724 aaKnown RBP12.44□□□□□ -0.42
CDH5-208ENST00000614547 ANGPTL2Q9UKU9 493 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 KAT6AQ92794 2004 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 STRCP1A6NGW2 1772 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 MEI4A8MW99 385 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 CFLARO15519 480 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 CREB3O43889 395 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 USP1O94782 785 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 LMNAP02545 664 aaKnown RBP12.44□□□□□ -0.42
CDH5-208ENST00000614547 MYL2P10916 166 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 BGNP21810 368 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 HOXD13P35453 343 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 PRELPP51888 382 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 WDR4P57081 412 aaKnown RBP12.44□□□□□ -0.42
CDH5-208ENST00000614547 MAP7Q14244 749 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 HIF1AQ16665 826 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 EMC10Q5UCC4 262 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 SPOPLQ6IQ16 392 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 CLEC4GQ6UXB4 293 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 GSDMBQ8TAX9 411 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 NSL1Q96IY1 281 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 EPB41L4BQ9H329 900 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms