RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 FGGP02679 453 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 SLC10A3P09131 477 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 ACO1P21399 889 aaKnown RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 COMTP21964 271 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 SCP2P22307 547 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 POLR2BP30876 1174 aaKnown RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 RGS2P41220 211 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 GYS2P54840 703 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 PRKCZQ05513 592 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 SLC10A6Q3KNW5 377 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 FAM182AQ5T1J6 154 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 C10orf76Q5T2E6 689 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 CYP4A22Q5TCH4 519 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 MMS22LQ6ZRQ5 1243 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.68□□□□□ -1.82
LIG4-205ENST00000614526 ZNF467Q7Z7K2 595 aaPredicted RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 DDX42Q86XP3 938 aaKnown RBP eCLIP3.68□□□□□ -1.82
LIG4-205ENST00000614526 C1orf127Q8N9H9 656 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 TRPV1Q8NER1 839 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 DDX1Q92499 740 aaKnown RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 ALG3Q92685 438 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 C18orf25Q96B23 403 aaPredicted RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 KIF12Q96FN5 646 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 ANKRD36BP1Q96IX9 119 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 FAM118BQ9BPY3 351 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 LPIN3Q9BQK8 851 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 RNF39Q9H2S5 420 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 SMYD3Q9H7B4 428 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 PTPRHQ9HD43 1115 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 KLHL11Q9NVR0 708 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 TJP2Q9UDY2 1190 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 PARP2Q9UGN5 583 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 HMGXB4Q9UGU5 601 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 ANAPC7Q9UJX3 599 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 NENFQ9UMX5 172 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 GNEQ9Y223 722 aaKnown RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 PIN4Q9Y237 131 aaKnown RBP3.68□□□□□ -1.82
LIG4-205ENST00000614526 TNFSF13BQ9Y275 285 aa3.68□□□□□ -1.82
LIG4-205ENST00000614526 A0A0G2JMZ2 1700 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 A6NJR5 290 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 UNCXA6NJT0 531 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 FAM155AB1AL88 458 aaPredicted RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 GOLGA8SH3BPF8 625 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 O00370 1275 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 KRIT1O00522 736 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 ASAP2O43150 1006 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 HCRTO43612 131 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 GAS2O43903 313 aaKnown RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 ASS1P00966 412 aaKnown RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 RFX1P22670 979 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 NSFP46459 744 aaKnown RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 PSEN2P49810 448 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 GCNT1Q02742 428 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 GUCY2DQ02846 1103 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 TUBB2AQ13885 445 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 FSCN1Q16658 493 aaKnown RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 IFI16Q16666 785 aaKnown RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 C8orf74Q6P047 294 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 WDR49Q8IV35 697 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 C7orf31Q8N865 590 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 RNF169Q8NCN4 708 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 C1orf131Q8NDD1 294 aaKnown RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 ZNF564Q8TBZ8 553 aaPredicted RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 ZNF606Q8WXB4 792 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 TFAP2BQ92481 460 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 TRIB2Q92519 343 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 ACSF2Q96CM8 615 aaPredicted RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 ACAP3Q96P50 834 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 ZSWIM1Q9BR11 485 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 ADPGKQ9BRR6 497 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 TUBB2BQ9BVA1 445 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 CCDC94Q9BW85 323 aaPredicted RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 CELF4Q9BZC1 486 aaKnown RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 OSBPL7Q9BZF2 842 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 ISCUQ9H1K1 167 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 NXF3Q9H4D5 531 aaKnown RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 GOLGA2P5Q9HBQ8 144 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 EPB41L5Q9HCM4 733 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 ADAM22Q9P0K1 906 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 SIX4Q9UIU6 781 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 TSKSQ9UJT2 592 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 PCDHB2Q9Y5E7 798 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 A0A0U1RQG5 324 aaPredicted RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 TCRBV7S2A1N4TA0A589 114 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 MEIS3P2A8K0S8 358 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 GLI1P08151 1106 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 PROZP22891 400 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 IGFBP6P24592 240 aaPredicted RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 CLDN10P78369 228 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 LACTBP83111 547 aaPredicted RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 SKIDA1Q1XH10 827 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 CLEC16AQ2KHT3 1053 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 SGSM1Q2NKQ1 1148 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 ATP13A4Q4VNC1 1196 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 DCAF12L1Q5VU92 463 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 ACAD10Q6JQN1 1059 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 EXOC8Q8IYI6 725 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 C12orf29Q8N999 325 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 UBA3Q8TBC4 463 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 TMEM174Q8WUU8 243 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms