RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 STAT5BP51692 787 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 ZNF200P98182 395 aaPredicted RBP18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 TMEM154Q6P9G4 183 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 SLC44A5Q8NCS7 719 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 SEPT3Q9UH03 358 aa18.28■□□□□ 0.52
HMGXB3-206ENST00000613459 PP2D1A8MPX8 630 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 TBC1D4O60343 1298 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 SERPINI2O75830 405 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 CD4P01730 458 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 SPRP35270 261 aaPredicted RBP18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 ZNF543Q08ER8 600 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 AASDHQ4L235 1098 aaPredicted RBP18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 SCFD2Q8WU76 684 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 CELF1Q92879 486 aaKnown RBP18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 VPS33BQ9H267 617 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 COPG1Q9Y678 874 aaKnown RBP18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 HIST1H2AGP0C0S8 130 aaPredicted RBP18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 HIST1H2ADP20671 130 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 S100A5P33763 92 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 GALCP54803 685 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 CCZ1BP86790 482 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 CCZ1P86791 482 aaPredicted RBP18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 MMGT1Q8N4V1 131 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 SRBD1Q8N5C6 995 aaKnown RBP18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 HIST1H2AHQ96KK5 128 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 NR1H4Q96RI1 486 aaPredicted RBP18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 HIST1H2AJQ99878 128 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 H2AFJQ9BTM1 129 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 ASCC2Q9H1I8 757 aaPredicted RBP18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 RSAD1Q9HA92 442 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 ZC3H7BQ9UGR2 993 aaKnown RBP18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 AURKCQ9UQB9 309 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 UCHL3P15374 230 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 PLD3Q8IV08 490 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 FAM84BQ96KN1 310 aaPredicted RBP18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 GPR101Q96P66 508 aaPredicted RBP18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 ADNPQ9H2P0 1102 aa18.27■□□□□ 0.52
HMGXB3-206ENST00000613459 SRP72O76094 671 aaKnown RBP18.27■□□□□ 0.51
HMGXB3-206ENST00000613459 CYBBP04839 570 aa18.27■□□□□ 0.51
HMGXB3-206ENST00000613459 RBM46Q8TBY0 533 aaKnown RBP18.27■□□□□ 0.51
HMGXB3-206ENST00000613459 RMDN1Q96DB5 314 aa18.27■□□□□ 0.51
HMGXB3-206ENST00000613459 DYRK4Q9NR20 520 aa18.27■□□□□ 0.51
HMGXB3-206ENST00000613459 MAFGO15525 162 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 PJA2O43164 708 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 RFX8Q6ZV50 586 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 TAGAPQ8N103 731 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 KATNAL1Q9BW62 490 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 MRPS35P82673 323 aaKnown RBP18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 CYLC2Q14093 348 aaPredicted RBP18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 MFN1Q8IWA4 741 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 APPL2Q8NEU8 664 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 RDM1Q8NG50 284 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 DNAJC9Q8WXX5 260 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 SPON2Q9BUD6 331 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 MOSPD1Q9UJG1 213 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 EIF4E1BA6NMX2 242 aaKnown RBP18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 C19orf81C9J6K1 198 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 DFFAO00273 331 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 CACNB3P54284 484 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 TNS3Q68CZ2 1445 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 ENTPD3O75355 529 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 KDSRQ06136 332 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 SPP2Q13103 211 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 SYNE4Q8N205 404 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 MPP6Q9NZW5 540 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 NEU2Q9Y3R4 380 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 TULP4Q9NRJ4 1543 aa18.26■□□□□ 0.51
HMGXB3-206ENST00000613459 WDR47O94967 919 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 AKR1B1P15121 316 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 HSPA13P48723 471 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 PDK1Q15118 436 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 MTFR1Q15390 333 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 TRPM8Q7Z2W7 1104 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 SPATA2LQ8IUW3 424 aaPredicted RBP18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 SMARCAD1Q9H4L7 1026 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 ARHGEF38Q9NXL2 777 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 ABT1Q9ULW3 272 aaKnown RBP18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 WASHC5Q12768 1159 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 PDAP1Q13442 181 aaKnown RBP18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 CPVLQ9H3G5 476 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 SLC38A7Q9NVC3 462 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 GID8Q9NWU2 228 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 MTMR4Q9NYA4 1195 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 PCDHB2Q9Y5E7 798 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 CCDC78A2IDD5 438 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 GTF2H3Q13889 308 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 ATPAF2Q8N5M1 289 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 ISCUQ9H1K1 167 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 CDY2AQ9Y6F7 541 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 CDY1Q9Y6F8 540 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 SNRPAP09012 282 aaKnown RBP18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 CORO7P57737 925 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 TTC39BQ5VTQ0 682 aaPredicted RBP18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 RMDN2Q96LZ7 410 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 LRRIQ3A6PVS8 624 aaPredicted RBP18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 SEC24DO94855 1032 aaPredicted RBP18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 CPB1P15086 417 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 NSUN4Q96CB9 384 aaKnown RBP18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 CRAMP1Q96RY5 1269 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms