RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.96■□□□□ 0.47
IRF1-211ENST00000613424 AKAP3O75969 853 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 URODP06132 367 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 TMEM191BP0C7N4 346 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 TNNI1P19237 187 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 GTF2F1P35269 517 aaKnown RBP eCLIP17.96■□□□□ 0.47
IRF1-211ENST00000613424 GLUD2P49448 558 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 LRRC63Q05C16 580 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 HYAL1Q12794 435 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 DUOXA2Q1HG44 320 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 RTP2Q5QGT7 225 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 WDR49Q8IV35 697 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 C1orf127Q8N9H9 656 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 PARD3BQ8TEW8 1205 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 NELFBQ8WX92 580 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 PPP2R3CQ969Q6 453 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 EEF2KMTQ96G04 330 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 ANKRD36BP1Q96IX9 119 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 TTPALQ9BTX7 342 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 MTMR12Q9C0I1 747 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 SSX2IPQ9Y2D8 614 aa17.96■□□□□ 0.47
IRF1-211ENST00000613424 CETN3O15182 167 aa17.95■□□□□ 0.46
IRF1-211ENST00000613424 MAPK13O15264 365 aa17.95■□□□□ 0.46
IRF1-211ENST00000613424 FGFR3P22607 806 aa17.95■□□□□ 0.46
IRF1-211ENST00000613424 PSMC2P35998 433 aaKnown RBP17.95■□□□□ 0.46
IRF1-211ENST00000613424 NRIP1P48552 1158 aa17.95■□□□□ 0.46
IRF1-211ENST00000613424 LILRA4P59901 499 aa17.95■□□□□ 0.46
IRF1-211ENST00000613424 FKBP3Q00688 224 aaKnown RBP17.95■□□□□ 0.46
IRF1-211ENST00000613424 SKIV2LQ15477 1246 aaKnown RBP17.95■□□□□ 0.46
IRF1-211ENST00000613424 SCARA3Q6AZY7 606 aa17.95■□□□□ 0.46
IRF1-211ENST00000613424 CSGALNACT2Q8N6G5 542 aa17.95■□□□□ 0.46
IRF1-211ENST00000613424 CXorf38Q8TB03 319 aa17.95■□□□□ 0.46
IRF1-211ENST00000613424 RIN2Q8WYP3 895 aaPredicted RBP17.95■□□□□ 0.46
IRF1-211ENST00000613424 ZNF516Q92618 1163 aa17.95■□□□□ 0.46
IRF1-211ENST00000613424 SUSD3Q96L08 255 aa17.95■□□□□ 0.46
IRF1-211ENST00000613424 CGRRF1Q99675 332 aa17.95■□□□□ 0.46
IRF1-211ENST00000613424 AGAP1Q9UPQ3 857 aa17.95■□□□□ 0.46
IRF1-211ENST00000613424 PRUNE2Q8WUY3 3088 aa17.95■□□□□ 0.46
IRF1-211ENST00000613424 LRRIQ3A6PVS8 624 aaPredicted RBP17.94■□□□□ 0.46
IRF1-211ENST00000613424 SPTLC1O15269 473 aa17.94■□□□□ 0.46
IRF1-211ENST00000613424 TNNC2P02585 160 aa17.94■□□□□ 0.46
IRF1-211ENST00000613424 ITGB3P05106 788 aa17.94■□□□□ 0.46
IRF1-211ENST00000613424 TKTP29401 623 aaKnown RBP17.94■□□□□ 0.46
IRF1-211ENST00000613424 POLR2BP30876 1174 aaKnown RBP17.94■□□□□ 0.46
IRF1-211ENST00000613424 AARSP49588 968 aaKnown RBP eCLIP17.94■□□□□ 0.46
IRF1-211ENST00000613424 STX17P56962 302 aa17.94■□□□□ 0.46
IRF1-211ENST00000613424 CLDN10P78369 228 aa17.94■□□□□ 0.46
IRF1-211ENST00000613424 DUSP6Q16828 381 aa17.94■□□□□ 0.46
IRF1-211ENST00000613424 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.94■□□□□ 0.46
IRF1-211ENST00000613424 RBM43Q6ZSC3 357 aaKnown RBP17.94■□□□□ 0.46
IRF1-211ENST00000613424 ZC3H3Q8IXZ2 948 aaKnown RBP17.94■□□□□ 0.46
IRF1-211ENST00000613424 GPR65Q8IYL9 337 aa17.94■□□□□ 0.46
IRF1-211ENST00000613424 FAM186BQ8IYM0 893 aa17.94■□□□□ 0.46
IRF1-211ENST00000613424 LNX1Q8TBB1 728 aaPredicted RBP17.94■□□□□ 0.46
IRF1-211ENST00000613424 TMC2Q8TDI7 906 aa17.94■□□□□ 0.46
IRF1-211ENST00000613424 KLHL5Q96PQ7 755 aa17.94■□□□□ 0.46
IRF1-211ENST00000613424 DUSP9Q99956 384 aaKnown RBP17.94■□□□□ 0.46
IRF1-211ENST00000613424 RXFP1Q9HBX9 757 aa17.94■□□□□ 0.46
IRF1-211ENST00000613424 SIX4Q9UIU6 781 aa17.94■□□□□ 0.46
IRF1-211ENST00000613424 ITGA11Q9UKX5 1188 aa17.94■□□□□ 0.46
IRF1-211ENST00000613424 CTNND2Q9UQB3 1225 aa17.94■□□□□ 0.46
IRF1-211ENST00000613424 M0QZQ0 153 aa17.93■□□□□ 0.46
IRF1-211ENST00000613424 NCK2O43639 380 aa17.93■□□□□ 0.46
IRF1-211ENST00000613424 CLASP2O75122 1294 aaKnown RBP17.93■□□□□ 0.46
IRF1-211ENST00000613424 KRT19P08727 400 aa17.93■□□□□ 0.46
IRF1-211ENST00000613424 CNPP09543 421 aaKnown RBP17.93■□□□□ 0.46
IRF1-211ENST00000613424 PAX3P23760 479 aa17.93■□□□□ 0.46
IRF1-211ENST00000613424 NLRP12P59046 1061 aa17.93■□□□□ 0.46
IRF1-211ENST00000613424 DLG4P78352 724 aa17.93■□□□□ 0.46
IRF1-211ENST00000613424 RBP5P82980 135 aa17.93■□□□□ 0.46
IRF1-211ENST00000613424 PAK1Q13153 545 aa17.93■□□□□ 0.46
IRF1-211ENST00000613424 TTI2Q6NXR4 508 aa17.93■□□□□ 0.46
IRF1-211ENST00000613424 PRSS55Q6UWB4 352 aaPredicted RBP17.93■□□□□ 0.46
IRF1-211ENST00000613424 DSTYKQ6XUX3 929 aa17.93■□□□□ 0.46
IRF1-211ENST00000613424 TRAPPC11Q7Z392 1133 aa17.93■□□□□ 0.46
IRF1-211ENST00000613424 MLKLQ8NB16 471 aa17.93■□□□□ 0.46
IRF1-211ENST00000613424 PIK3R5Q8WYR1 880 aa17.93■□□□□ 0.46
IRF1-211ENST00000613424 BORCS6Q96GS4 357 aa17.93■□□□□ 0.46
IRF1-211ENST00000613424 CDCA3Q99618 268 aaPredicted RBP17.93■□□□□ 0.46
IRF1-211ENST00000613424 EMILIN2Q9BXX0 1053 aa17.93■□□□□ 0.46
IRF1-211ENST00000613424 PRDM6Q9NQX0 595 aa17.93■□□□□ 0.46
IRF1-211ENST00000613424 XIRP2A4UGR9 3374 aa17.93■□□□□ 0.46
IRF1-211ENST00000613424 SCN1AP35498 2009 aa17.93■□□□□ 0.46
IRF1-211ENST00000613424 VWA8A3KMH1 1905 aa17.92■□□□□ 0.46
IRF1-211ENST00000613424 BICDL2A1A5D9 508 aa17.92■□□□□ 0.46
IRF1-211ENST00000613424 SYN3O14994 580 aa17.92■□□□□ 0.46
IRF1-211ENST00000613424 LINC01565O15544 149 aa17.92■□□□□ 0.46
IRF1-211ENST00000613424 CST3P01034 146 aaPredicted RBP17.92■□□□□ 0.46
IRF1-211ENST00000613424 TAF6P49848 677 aa17.92■□□□□ 0.46
IRF1-211ENST00000613424 VAMP7P51809 220 aa17.92■□□□□ 0.46
IRF1-211ENST00000613424 ADAM15Q13444 863 aa17.92■□□□□ 0.46
IRF1-211ENST00000613424 COL19A1Q14993 1142 aa17.92■□□□□ 0.46
IRF1-211ENST00000613424 CTC1Q2NKJ3 1217 aa17.92■□□□□ 0.46
IRF1-211ENST00000613424 C1orf220Q5T0J3 134 aa17.92■□□□□ 0.46
IRF1-211ENST00000613424 CCDC183Q5T5S1 534 aa17.92■□□□□ 0.46
IRF1-211ENST00000613424 FOXR2Q6PJQ5 311 aa17.92■□□□□ 0.46
IRF1-211ENST00000613424 INTS8Q75QN2 995 aaKnown RBP17.92■□□□□ 0.46
IRF1-211ENST00000613424 EFHBQ8N7U6 833 aa17.92■□□□□ 0.46
IRF1-211ENST00000613424 PABPC5Q96DU9 382 aaKnown RBP17.92■□□□□ 0.46
IRF1-211ENST00000613424 SENP8Q96LD8 212 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms