RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 COPB1P53618 953 aaKnown RBP9.56□□□□□ -0.88
SMAD4-217ENST00000611848 ADKP55263 362 aaKnown RBP9.56□□□□□ -0.88
SMAD4-217ENST00000611848 PPP2R3AQ06190 1150 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 STIM1Q13586 685 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 KCNJ12Q14500 433 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 SLC10A6Q3KNW5 377 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 SEZ6Q53EL9 994 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 TTI2Q6NXR4 508 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 HS2ST1Q7LGA3 356 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 MTERF4Q7Z6M4 381 aaKnown RBP9.56□□□□□ -0.88
SMAD4-217ENST00000611848 HOMEZQ8IX15 550 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 ANKRD20A12PQ8NF67 263 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 GOLGA5Q8TBA6 731 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 KCNV2Q8TDN2 545 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 POF1BQ8WVV4 589 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 IGSF21Q96ID5 467 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 COLEC11Q9BWP8 271 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 NAA15Q9BXJ9 866 aaKnown RBP9.56□□□□□ -0.88
SMAD4-217ENST00000611848 ANK1P16157 1881 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 TTC26A0AVF1 554 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 GOLGA6L9A6NEM1 432 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 TGFB1I1O43294 461 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 XPOTO43592 962 aaKnown RBP9.55□□□□□ -0.88
SMAD4-217ENST00000611848 EXTL3O43909 919 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 CXCL8P10145 99 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 EEF1GP26641 437 aaKnown RBP9.55□□□□□ -0.88
SMAD4-217ENST00000611848 PBX3P40426 434 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 TNFSF9P41273 254 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 ACOT2P49753 483 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 PMS1P54277 932 aaKnown RBP9.55□□□□□ -0.88
SMAD4-217ENST00000611848 ETF1P62495 437 aaKnown RBP9.55□□□□□ -0.88
SMAD4-217ENST00000611848 RBM10P98175 930 aaKnown RBP9.55□□□□□ -0.88
SMAD4-217ENST00000611848 HSP90AA2PQ14568 343 aaPredicted RBP9.55□□□□□ -0.88
SMAD4-217ENST00000611848 BMS1Q14692 1282 aaKnown RBP9.55□□□□□ -0.88
SMAD4-217ENST00000611848 NAB2Q15742 525 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 ENOX2Q16206 610 aaKnown RBP9.55□□□□□ -0.88
SMAD4-217ENST00000611848 TIGD5Q53EQ6 642 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 GLRA4Q5JXX5 417 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 PDE12Q6L8Q7 609 aaKnown RBP9.55□□□□□ -0.88
SMAD4-217ENST00000611848 TRIM65Q6PJ69 517 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 PPFIBP1Q86W92 1011 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 NELFCDQ8IXH7 590 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 ANKRD7Q92527 254 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 TSC1Q92574 1164 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 ZNF592Q92610 1267 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 UROC1Q96N76 676 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 CBWD1Q9BRT8 395 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 CXCL16Q9H2A7 254 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 IKZF4Q9H2S9 585 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 ASB7Q9H672 318 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 L2HGDHQ9H9P8 463 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 KIAA1586Q9HCI6 787 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 TLR9Q9NR96 1032 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 MAPK8IP1Q9UQF2 711 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 PPP2R2CQ9Y2T4 447 aa9.55□□□□□ -0.88
SMAD4-217ENST00000611848 PRG3Q9Y2Y8 225 aaPredicted RBP9.55□□□□□ -0.88
SMAD4-217ENST00000611848 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.55□□□□□ -0.88
SMAD4-217ENST00000611848 BICDL2A1A5D9 508 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 LACTBL1A8MY62 500 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 PDXKO00764 312 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 MEFVO15553 781 aaPredicted RBP9.54□□□□□ -0.88
SMAD4-217ENST00000611848 MFAP3LO75121 409 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 IL18RAPO95256 599 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 GYPCP04921 128 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 PYGBP11216 843 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 CYP3A5P20815 502 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 CCNE1P24864 410 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 CAMK1Q14012 370 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 TRIM14Q14142 442 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 ZBTB41Q5SVQ8 909 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 CRELD2Q6UXH1 353 aaPredicted RBP9.54□□□□□ -0.88
SMAD4-217ENST00000611848 DDX53Q86TM3 631 aaKnown RBP9.54□□□□□ -0.88
SMAD4-217ENST00000611848 NT5DC4Q86YG4 428 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 CNGA4Q8IV77 575 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 C12orf56Q8IXR9 622 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 GPD1LQ8N335 351 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 GUF1Q8N442 669 aaKnown RBP9.54□□□□□ -0.88
SMAD4-217ENST00000611848 TMEM174Q8WUU8 243 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 PPP2R3CQ969Q6 453 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 SAAL1Q96ER3 474 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 KIF12Q96FN5 646 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 DDX27Q96GQ7 796 aaKnown RBP9.54□□□□□ -0.88
SMAD4-217ENST00000611848 ZMAT2Q96NC0 199 aaKnown RBP9.54□□□□□ -0.88
SMAD4-217ENST00000611848 DUSP9Q99956 384 aaKnown RBP9.54□□□□□ -0.88
SMAD4-217ENST00000611848 PDCL3Q9H2J4 239 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 PCIF1Q9H4Z3 704 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 NGRNQ9NPE2 291 aaKnown RBP9.54□□□□□ -0.88
SMAD4-217ENST00000611848 AGPAT3Q9NRZ7 376 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 TAB2Q9NYJ8 693 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 HSPBP1Q9NZL4 362 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 UBQLN1Q9UMX0 589 aaKnown RBP9.54□□□□□ -0.88
SMAD4-217ENST00000611848 ATG2AQ2TAZ0 1938 aa9.54□□□□□ -0.88
SMAD4-217ENST00000611848 A0A1W2PQC6 194 aa9.53□□□□□ -0.88
SMAD4-217ENST00000611848 TRIM49BA6NDI0 452 aa9.53□□□□□ -0.88
SMAD4-217ENST00000611848 CASTOR2A6NHX0 329 aa9.53□□□□□ -0.88
SMAD4-217ENST00000611848 ZNF233A6NK53 670 aa9.53□□□□□ -0.88
SMAD4-217ENST00000611848 LGALS16A8MUM7 142 aa9.53□□□□□ -0.88
SMAD4-217ENST00000611848 TMEM189-UBE2V1I3L0A0 370 aa9.53□□□□□ -0.88
SMAD4-217ENST00000611848 FSCN2O14926 492 aa9.53□□□□□ -0.88
SMAD4-217ENST00000611848 CLIC2O15247 247 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms