RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 FBXO4Q9UKT5 387 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 KIF3AQ9Y496 699 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 MYO15AQ9UKN7 3530 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 SPTLC1O15269 473 aa16.22■□□□□ 0.19
CTSA-216ENST00000607212 ABLIM3O94929 683 aa16.22■□□□□ 0.19
CTSA-216ENST00000607212 SEC24AO95486 1093 aa16.22■□□□□ 0.19
CTSA-216ENST00000607212 SPAG1Q07617 926 aa16.22■□□□□ 0.19
CTSA-216ENST00000607212 XKR4Q5GH76 650 aa16.22■□□□□ 0.19
CTSA-216ENST00000607212 TPGS2Q68CL5 300 aa16.22■□□□□ 0.19
CTSA-216ENST00000607212 C1orf186Q6ZWK4 172 aa16.22■□□□□ 0.19
CTSA-216ENST00000607212 USP37Q86T82 979 aa16.22■□□□□ 0.19
CTSA-216ENST00000607212 TCEAL8Q8IYN2 117 aa16.22■□□□□ 0.19
CTSA-216ENST00000607212 HS6ST3Q8IZP7 471 aa16.22■□□□□ 0.19
CTSA-216ENST00000607212 DDX12PQ92771 950 aa16.22■□□□□ 0.19
CTSA-216ENST00000607212 SUSD3Q96L08 255 aa16.22■□□□□ 0.19
CTSA-216ENST00000607212 TRMT61BQ9BVS5 477 aaKnown RBP16.22■□□□□ 0.19
CTSA-216ENST00000607212 TIPINQ9BVW5 301 aa16.22■□□□□ 0.19
CTSA-216ENST00000607212 TUBGCP4Q9UGJ1 667 aa16.22■□□□□ 0.19
CTSA-216ENST00000607212 TULP1O00294 542 aaPredicted RBP16.21■□□□□ 0.19
CTSA-216ENST00000607212 MAN2B1O00754 1011 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 CLDN3O15551 220 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 TOM1L1O75674 476 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 CXCL8P10145 99 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 PLS3P13797 630 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 GJA1P17302 382 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 U2AF2P26368 475 aaKnown RBP eCLIP16.21■□□□□ 0.19
CTSA-216ENST00000607212 GDI1P31150 447 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 TOB1P50616 345 aaPredicted RBP16.21■□□□□ 0.19
CTSA-216ENST00000607212 CACNB1Q02641 598 aaPredicted RBP16.21■□□□□ 0.19
CTSA-216ENST00000607212 ZNF528Q3MIS6 628 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 FAM78AQ5JUQ0 283 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 TSSK4Q6SA08 328 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 DSTYKQ6XUX3 929 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 KCNK18Q7Z418 384 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 YAF2Q8IY57 180 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 MAML2Q8IZL2 1156 aaPredicted RBP16.21■□□□□ 0.19
CTSA-216ENST00000607212 DNASE1L2Q92874 299 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 IRF7Q92985 503 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 FAM212AQ96EL1 285 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 KIF12Q96FN5 646 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 AVENQ9NQS1 362 aaPredicted RBP16.21■□□□□ 0.19
CTSA-216ENST00000607212 AFF4Q9UHB7 1163 aaKnown RBP16.21■□□□□ 0.19
CTSA-216ENST00000607212 PCDHB8Q9UN66 801 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 PCDHGA2Q9Y5H1 932 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 TICRRQ7Z2Z1 1910 aa16.21■□□□□ 0.19
CTSA-216ENST00000607212 VWA3AA6NCI4 1184 aa16.2■□□□□ 0.18
CTSA-216ENST00000607212 H3BQV1 296 aa16.2■□□□□ 0.18
CTSA-216ENST00000607212 PROZP22891 400 aa16.2■□□□□ 0.18
CTSA-216ENST00000607212 GUCY2CP25092 1073 aa16.2■□□□□ 0.18
CTSA-216ENST00000607212 PRPHP41219 470 aa16.2■□□□□ 0.18
CTSA-216ENST00000607212 YWHAHQ04917 246 aaPredicted RBP16.2■□□□□ 0.18
CTSA-216ENST00000607212 PPP2R3AQ06190 1150 aa16.2■□□□□ 0.18
CTSA-216ENST00000607212 MAPK7Q13164 816 aa16.2■□□□□ 0.18
CTSA-216ENST00000607212 PUM1Q14671 1186 aaKnown RBP eCLIP16.2■□□□□ 0.18
CTSA-216ENST00000607212 IL17AQ16552 155 aa16.2■□□□□ 0.18
CTSA-216ENST00000607212 PRSS36Q5K4E3 855 aa16.2■□□□□ 0.18
CTSA-216ENST00000607212 RASSF8Q8NHQ8 419 aa16.2■□□□□ 0.18
CTSA-216ENST00000607212 PGLYRP2Q96PD5 576 aa16.2■□□□□ 0.18
CTSA-216ENST00000607212 ZSCAN32Q9NX65 697 aa16.2■□□□□ 0.18
CTSA-216ENST00000607212 TIMM13Q9Y5L4 95 aaPredicted RBP16.2■□□□□ 0.18
CTSA-216ENST00000607212 EP300Q09472 2414 aaPredicted RBP16.19■□□□□ 0.18
CTSA-216ENST00000607212 H0YCG3 227 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 ZNF263O14978 683 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 XPOTO43592 962 aaKnown RBP16.19■□□□□ 0.18
CTSA-216ENST00000607212 KRT18P05783 430 aaKnown RBP16.19■□□□□ 0.18
CTSA-216ENST00000607212 PLA2G4BP0C869 781 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 PSMC3P17980 439 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 VIPR2P41587 438 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 CCR2P41597 374 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 LIG4P49917 911 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 PLD1Q13393 1074 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 DHX8Q14562 1220 aaKnown RBP16.19■□□□□ 0.18
CTSA-216ENST00000607212 PPP2R5DQ14738 602 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 SLC10A6Q3KNW5 377 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 RILPL1Q5EBL4 403 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 RNF19BQ6ZMZ0 732 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 LEMD2Q8NC56 503 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 ZSCAN18Q8TBC5 510 aaPredicted RBP16.19■□□□□ 0.18
CTSA-216ENST00000607212 CSGALNACT1Q8TDX6 532 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 SPIRE2Q8WWL2 714 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 FAM3CQ92520 227 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 SMARCD2Q92925 531 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 ASB16Q96NS5 453 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 ZHX3Q9H4I2 956 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.19■□□□□ 0.18
CTSA-216ENST00000607212 RAB23Q9ULC3 237 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 USP18Q9UMW8 372 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 SMG5Q9UPR3 1016 aaKnown RBP16.19■□□□□ 0.18
CTSA-216ENST00000607212 PIAS3Q9Y6X2 628 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 GVINP1Q7Z2Y8 2422 aa16.19■□□□□ 0.18
CTSA-216ENST00000607212 NPHP3-ACAD11A0A0J9YXS1 232 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 ABLIM1O14639 778 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 TBC1D4O60343 1298 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 FAM13AO94988 1023 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 CLTAP09496 248 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 OR4Q2P0C623 313 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 MAPTP10636 758 aaKnown RBP16.18■□□□□ 0.18
CTSA-216ENST00000607212 FCARP24071 287 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 EPHB3P54753 998 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 MTAPQ13126 283 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms