RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 PIK3C2AO00443 1686 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 C1orf167Q5SNV9 1468 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 MAGEA13PA6NCF6 341 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 OTOL1A6NHN0 477 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 TRAFD1O14545 582 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZNF185O15231 689 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 POLR2DO15514 142 aaKnown RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 SNX3O60493 162 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 E2F6O75461 281 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 HTR3BO95264 441 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 GJB6O95452 261 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 EYA4O95677 639 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 SSBP05455 408 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 SYPP08247 313 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 NUDT17P0C025 328 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 FAM153BP0C7A2 387 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 HSPD1P10809 573 aaKnown RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 SDHBP21912 280 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 SP100P23497 879 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 VIPR1P32241 457 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 HSD17B3P37058 310 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 PPP1R2P41236 205 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 IARSP41252 1262 aaKnown RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 MSH2P43246 934 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 MMP13P45452 471 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 PDE6CP51160 858 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 ALDH5A1P51649 535 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 PSMD7P51665 324 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 INHBCP55103 352 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 RTP1P59025 263 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 GUCY1B3Q02153 619 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 SULT2A1Q06520 285 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZNF844Q08AG5 666 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 ACVR2BQ13705 512 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 KPNB1Q14974 876 aaKnown RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 EZH2Q15910 746 aaKnown RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 PPP2R5EQ16537 467 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 VMACQ2NL98 169 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 FAM153CQ494X1 144 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 DAB2IPQ5VWQ8 1189 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 KRT40Q6A162 431 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 FOXR2Q6PJQ5 311 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 KSR2Q6VAB6 950 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 UNC13DQ70J99 1090 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 TBC1D1Q86TI0 1168 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 PNMA8AQ86V59 439 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 VPS37DQ86XT2 251 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 COL23A1Q86Y22 540 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 MYLK4Q86YV6 388 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 RELL1Q8IUW5 271 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 FAM114A1Q8IWE2 563 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 MB21D2Q8IYB1 491 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 CNBD1Q8NA66 436 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZBTB8BQ8NAP8 495 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 RBBP8NLQ8NC74 664 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 PHC3Q8NDX5 983 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 TBC1D16Q8TBP0 767 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 SYTL5Q8TDW5 730 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 SNRNP27Q8WVK2 155 aaKnown RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 ATXN2LQ8WWM7 1075 aaKnown RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 CASKIN2Q8WXE0 1202 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 GATAD2BQ8WXI9 593 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 INPP5DQ92835 1189 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 FERMT2Q96AC1 680 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 GRAMD1AQ96CP6 724 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 PAGE5Q96GU1 130 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 SMC6Q96SB8 1091 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 TLR10Q9BXR5 811 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 NSRP1Q9H0G5 558 aaKnown RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 EPB41L1Q9H4G0 881 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 RABEP2Q9H5N1 569 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 SH2D4AQ9H788 454 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 TLE6Q9H808 572 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 NHEJ1Q9H9Q4 299 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 EPB41L5Q9HCM4 733 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 LUC7LQ9NQ29 371 aaKnown RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 JADE2Q9NQC1 790 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 FAM114A2Q9NRY5 505 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 EXOC1Q9NV70 894 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 RMND1Q9NWS8 449 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 DDX43Q9NXZ2 648 aaKnown RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 IL1RAPL1Q9NZN1 696 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 CNOT8Q9UFF9 292 aaKnown RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 PRKAG3Q9UGI9 489 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 FAM153AQ9UHL3 310 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 NFU1Q9UMS0 254 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZNF148Q9UQR1 794 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 LRCH1Q9Y2L9 728 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 DAAM1Q9Y4D1 1078 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 NR2E3Q9Y5X4 410 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 EID1Q9Y6B2 187 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 COMMD3-BMI1R4GMX3 469 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 ATP8B3O60423 1300 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 PNPLA7Q6ZV29 1317 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 SYNRGQ9UMZ2 1314 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 CPDO75976 1380 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 ALKQ9UM73 1620 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 MYH6P13533 1939 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 A2ML1A8K2U0 1454 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms