RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 PRKCBP05771 671 aa22.13■■□□□ 1.13
SH3D19-211ENST00000604030 HNRNPCP07910 306 aaKnown RBP eCLIP22.13■■□□□ 1.138e-7■□□□□ 10.6
SH3D19-211ENST00000604030 RFC5P40937 340 aa22.13■■□□□ 1.13
SH3D19-211ENST00000604030 CYLC2Q14093 348 aaPredicted RBP22.13■■□□□ 1.13
SH3D19-211ENST00000604030 SF3B3Q15393 1217 aaKnown RBP22.13■■□□□ 1.13
SH3D19-211ENST00000604030 ADRM1Q16186 407 aa22.13■■□□□ 1.13
SH3D19-211ENST00000604030 PAPD7Q5XG87 772 aaKnown RBP22.13■■□□□ 1.13
SH3D19-211ENST00000604030 QTRT2Q9H974 415 aaKnown RBP22.13■■□□□ 1.13
SH3D19-211ENST00000604030 IL18RAPO95256 599 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 TPI1P60174 286 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 PPIL6Q8IXY8 311 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 C9orf72Q96LT7 481 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 RAB6BQ9NRW1 208 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 DBR1Q9UK59 544 aaKnown RBP22.12■■□□□ 1.13
SH3D19-211ENST00000604030 ASB14A6NK59 587 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 SRP72O76094 671 aaKnown RBP22.12■■□□□ 1.13
SH3D19-211ENST00000604030 MUTP22033 750 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 URGCPQ8TCY9 931 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 PPP1R16BQ96T49 567 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 DLC1Q96QB1 1528 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 TRIM66O15016 1216 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 KPNB1Q14974 876 aaKnown RBP22.12■■□□□ 1.13
SH3D19-211ENST00000604030 BARGINQ6ZT62 677 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 LZICQ8WZA0 190 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 DDX50Q9BQ39 737 aaKnown RBP22.12■■□□□ 1.13
SH3D19-211ENST00000604030 PLEKHA5Q9HAU0 1116 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 TNS3Q68CZ2 1445 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 GOLGA8TH3BQL2 631 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 GPSM2P81274 684 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 RAD51Q06609 339 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 RDM1Q8NG50 284 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 TRIM10Q9UDY6 481 aa22.12■■□□□ 1.13
SH3D19-211ENST00000604030 MAFGO15525 162 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 PDGFRAP16234 1089 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 HSD17B3P37058 310 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 NFX1Q12986 1120 aaKnown RBP22.11■■□□□ 1.13
SH3D19-211ENST00000604030 LBRQ14739 615 aaKnown RBP22.11■■□□□ 1.13
SH3D19-211ENST00000604030 TMEM154Q6P9G4 183 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 EME1Q96AY2 570 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 KLRC1P26715 233 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 MAP4P27816 1152 aaKnown RBP22.11■■□□□ 1.13
SH3D19-211ENST00000604030 ACADSBP45954 432 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 C16orf86Q6ZW13 317 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 KIF12Q96FN5 646 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 GPR101Q96P66 508 aaPredicted RBP22.11■■□□□ 1.13
SH3D19-211ENST00000604030 MANSC1Q9H8J5 431 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 DAB1O75553 588 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 ZNF235Q14590 738 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 SLC10A4Q96EP9 437 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 TMEM117Q9H0C3 514 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 GID8Q9NWU2 228 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 IL1RAPL1Q9NZN1 696 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 NBPF26B4DH59 902 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 MMP10P09238 476 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 WEE2P0C1S8 567 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 MYL2P10916 166 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 HNRNPH1P31943 449 aaKnown RBP22.11■■□□□ 1.13
SH3D19-211ENST00000604030 ITGA8P53708 1063 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 GEMIN4P57678 1058 aaKnown RBP22.11■■□□□ 1.13
SH3D19-211ENST00000604030 NCOA4Q13772 614 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 KRT33BQ14525 404 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 BTBD8Q5XKL5 378 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 SCN4BQ8IWT1 228 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 NBPF15Q8N660 670 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 WDR70Q9NW82 654 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 SEPT3Q9UH03 358 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 CDC42BPAQ5VT25 1732 aa22.11■■□□□ 1.13
SH3D19-211ENST00000604030 CTDNEP1O95476 244 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 STX19Q8N4C7 294 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 C17orf75Q9HAS0 396 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 MAD2L2Q9UI95 211 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 CDYLQ9Y232 598 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 B2RBV5 119 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 PSTPIP1O43586 416 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 APRTP07741 180 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 GFAPP14136 432 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 TPCN2Q8NHX9 752 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 MMTAG2Q9BU76 263 aaKnown RBP22.1■■□□□ 1.13
SH3D19-211ENST00000604030 RUBCNLQ9H714 662 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 FAM205CA6NFA0 338 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 RALAP11233 206 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 TRPC1P48995 793 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 CACNB3P54284 484 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 MAPK7Q13164 816 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 PDK1Q15118 436 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 RIN2Q8WYP3 895 aaPredicted RBP22.1■■□□□ 1.13
SH3D19-211ENST00000604030 E2F7Q96AV8 911 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 RGL1Q9NZL6 768 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 SUFUQ9UMX1 484 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 SNAP23O00161 211 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 ADORA2BP29275 332 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 RANBP1P43487 201 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 RBBP7Q16576 425 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 ZNF772Q68DY9 489 aaPredicted RBP22.1■■□□□ 1.13
SH3D19-211ENST00000604030 SLC13A5Q86YT5 568 aaPredicted RBP22.1■■□□□ 1.13
SH3D19-211ENST00000604030 CCNJLQ8IV13 435 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 C4orf33Q8N1A6 199 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 RNF217Q8TC41 542 aa22.1■■□□□ 1.13
SH3D19-211ENST00000604030 GTPBP10A4D1E9 387 aaKnown RBP22.09■■□□□ 1.13
SH3D19-211ENST00000604030 SESN2P58004 480 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms