RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 YTHDF3Q7Z739 585 aaKnown RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 GPR161Q8N6U8 529 aaKnown RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 SNIP1Q8TAD8 396 aaKnown RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 GPR152Q8TDT2 470 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 ZDHHC1Q8WTX9 485 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 DDX1Q92499 740 aaKnown RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 HTRA1Q92743 480 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 USP7Q93009 1102 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 CMTM3Q96MX0 182 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 THAP9Q9H5L6 903 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 NMRK2Q9NPI5 230 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 C14orf119Q9NWQ9 140 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 ATXN10Q9UBB4 475 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 TRPC5Q9UL62 973 aaPredicted RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 DENND2AQ9ULE3 1009 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 TARSL2A2RTX5 802 aaKnown RBP5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 CAPN14A8MX76 684 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 TTI1O43156 1089 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 ZSCAN12O43309 604 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 SHOX2O60902 331 aaPredicted RBP5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 KERAO60938 352 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 TMCC1O94876 653 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 TROVE2P10155 538 aaKnown RBP eCLIP5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 SYT1P21579 422 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 TXLNAP40222 546 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 ERVK-21P61565 698 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 GUCY1B3Q02153 619 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 CUL2Q13617 745 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 ARL13BQ3SXY8 428 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 HSP90AA4PQ58FG1 418 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 THAP5Q7Z6K1 395 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 MTDHQ86UE4 582 aaKnown RBP5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 SEPT12Q8IYM1 358 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 GRAMD1CQ8IYS0 662 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 CMTR2Q8IYT2 770 aaKnown RBP5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 TEKT4Q8WW24 435 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 LRRC45Q96CN5 670 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 PPP1R13BQ96KQ4 1090 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 WNT5BQ9H1J7 359 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 FAM86C1Q9NVL1 165 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 STK39Q9UEW8 545 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 CIDEBQ9UHD4 219 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 ADGRE2Q9UHX3 823 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 COL14A1Q05707 1796 aaKnown RBP5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 NOS1P29475 1434 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 A0A1W2PPL8 197 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 MYO1FO00160 1098 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 PROM1O43490 865 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 ADAMTS4O75173 837 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 ERAL1O75616 437 aaKnown RBP5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 URI1O94763 535 aaPredicted RBP5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 PSMC4P43686 418 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 RABIFP47224 123 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 GNAQP50148 359 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 SLC26A5P58743 744 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 NRG1Q02297 640 aaPredicted RBP5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 ZBTB16Q05516 673 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 BYSLQ13895 437 aaKnown RBP5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 SMAD2Q15796 467 aaKnown RBP5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 ZCCHC12Q6PEW1 402 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 IL27RAQ6UWB1 636 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 CEP57Q86XR8 500 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 TTC39CQ8N584 583 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 TMEM57Q8N5G2 664 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 NKD1Q969G9 470 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 VPS39Q96JC1 886 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 PLVAPQ9BX97 442 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 ACPTQ9BZG2 426 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 TRIM5Q9C035 493 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 C11orf16Q9NQ32 467 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 MYO1AQ9UBC5 1043 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 PCOLCE2Q9UKZ9 415 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 CARD8Q9Y2G2 431 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 ZDHHC9Q9Y397 364 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 FLT1P17948 1338 aa5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 ZNF644Q9H582 1327 aaPredicted RBP5.36□□□□□ -1.55
SPTBN1-206ENST00000602898 CRYBG1Q9Y4K1 1723 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 hCG_1807616A0A1W2PRN6 198 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 CTAGE9A4FU28 777 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 CCDC151A5D8V7 595 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 SGK1O00141 431 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 ABLIM1O14639 778 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 MCF2LO15068 1137 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 PLSCR1O15162 318 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 IDH1O75874 414 aaKnown RBP5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 ENDOD1O94919 500 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 ADH1AP07327 375 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 PPP2R1AP30153 589 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 RECQLP46063 649 aaPredicted RBP5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 ASMTP46597 345 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 MTX1Q13505 466 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 ZYXQ15942 572 aaKnown RBP5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 FAM209BQ5JX69 171 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 TMEM154Q6P9G4 183 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 ZNF783Q6ZMS7 281 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 INTS8Q75QN2 995 aaKnown RBP5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 B4GALNT4Q76KP1 1039 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 KIRREL3Q8IZU9 778 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 SMARCC2Q8TAQ2 1214 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 KLHDC4Q8TBB5 520 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms