RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 TMEM132AQ24JP5 1023 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 VWA3BQ502W6 1294 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 FOXB2Q5VYV0 432 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 MAP7D3Q8IWC1 876 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 IQCDQ96DY2 449 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 VPS33BQ9H267 617 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 VAV3Q9UKW4 847 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 LRRC37AA6NMS7 1700 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 LTBP1Q14766 1721 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 LAMB1P07942 1786 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 ACSL3O95573 720 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 BAG2O95816 211 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 GNAZP19086 355 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 DSG3P32926 999 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 CNPY1Q3B7I2 92 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 GJB7Q6PEY0 223 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 METTL13Q8N6R0 699 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 COPS5Q92905 334 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 TXNRD2Q9NNW7 524 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 DNAJC17Q9NVM6 304 aaKnown RBP16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 HOXC10Q9NYD6 342 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 NKIRAS1Q9NYS0 192 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 MAP3K7O43318 606 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 CBX6O95503 412 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 CREB1P16220 341 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 CNGA2Q16280 664 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 SEZ6Q53EL9 994 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 CEP70Q8NHQ1 597 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 ASAP3Q8TDY4 903 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.29■□□□□ 0.29e-6■■■■■ 27.7
PPFIA3-206ENST00000602655 TBC1D10AQ9BXI6 508 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 PXMP2Q9NR77 195 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 MAST2Q6P0Q8 1798 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 FGFR1OPO95684 399 aaKnown RBP16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 CBX3Q13185 183 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 LLGL1Q15334 1064 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 NAB2Q15742 525 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 LY6KQ17RY6 165 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 LMBRD2Q68DH5 695 aaPredicted RBP16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 ZSWIM2Q8NEG5 633 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 MCUR1Q96AQ8 359 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 CENPKQ9BS16 269 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 ACAD9Q9H845 621 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 NMRK2Q9NPI5 230 aa16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 ZNF214Q9UL59 606 aaPredicted RBP16.29■□□□□ 0.2
PPFIA3-206ENST00000602655 A0A087X0T9 212 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 TJP3O95049 919 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 FAM228BP0C875 321 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 PAX3P23760 479 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 CDK17Q00537 523 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 KBTBD12Q3ZCT8 623 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 DNAJC14Q6Y2X3 702 aaPredicted RBP16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 VPS52Q8N1B4 723 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 TMEM143Q96AN5 459 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 CYTH2Q99418 400 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 ASCC2Q9H1I8 757 aaPredicted RBP16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 PABPC3Q9H361 631 aaKnown RBP16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 MTRF1LQ9UGC7 380 aaKnown RBP16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 LAMA3Q16787 3333 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 PSMD10O75832 226 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 CELF2O95319 508 aaKnown RBP16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 MYCP01106 439 aaPredicted RBP16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 GM2AP17900 193 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 TMEM119Q4V9L6 283 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 FBXO25Q8TCJ0 367 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 DHTKD1Q96HY7 919 aaPredicted RBP16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 MYLK2Q9H1R3 596 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 DCLRE1BQ9H816 532 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 EXOC3O60645 756 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 CCNE2O96020 404 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 AGTP01019 485 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 CCNG1P51959 295 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 SLC12A3P55017 1021 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 CATSPERGQ6ZRH7 1159 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 AGGF1Q8N302 714 aaeCLIP16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 DNAJC1Q96KC8 554 aaKnown RBP16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 ERGIC2Q96RQ1 377 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 LSM14BQ9BX40 385 aaKnown RBP16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 DENND2DQ9H6A0 471 aaPredicted RBP16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 LARSQ9P2J5 1176 aaKnown RBP16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 PDP2Q9P2J9 529 aa16.28■□□□□ 0.2
PPFIA3-206ENST00000602655 MYH7BA7E2Y1 1941 aa16.27■□□□□ 0.2
PPFIA3-206ENST00000602655 LRRN2O75325 713 aa16.27■□□□□ 0.2
PPFIA3-206ENST00000602655 GNA14O95837 355 aa16.27■□□□□ 0.2
PPFIA3-206ENST00000602655 ARHGAP44Q17R89 818 aa16.27■□□□□ 0.2
PPFIA3-206ENST00000602655 ARHGAP18Q8N392 663 aa16.27■□□□□ 0.2
PPFIA3-206ENST00000602655 NSUN6Q8TEA1 469 aaKnown RBP16.27■□□□□ 0.2
PPFIA3-206ENST00000602655 UTP4Q969X6 686 aaKnown RBP16.27■□□□□ 0.2
PPFIA3-206ENST00000602655 IWS1Q96ST2 819 aa16.27■□□□□ 0.2
PPFIA3-206ENST00000602655 AFG3L2Q9Y4W6 797 aa16.27■□□□□ 0.2
PPFIA3-206ENST00000602655 PSMC4P43686 418 aa16.27■□□□□ 0.19
PPFIA3-206ENST00000602655 DR1Q01658 176 aa16.27■□□□□ 0.19
PPFIA3-206ENST00000602655 FBXO16Q8IX29 292 aaPredicted RBP16.27■□□□□ 0.19
PPFIA3-206ENST00000602655 TMCO1Q9UM00 188 aa16.27■□□□□ 0.19
PPFIA3-206ENST00000602655 YWHABP31946 246 aaKnown RBP16.27■□□□□ 0.19
PPFIA3-206ENST00000602655 GALNTL6Q49A17 601 aa16.27■□□□□ 0.19
PPFIA3-206ENST00000602655 RNF25Q96BH1 459 aaPredicted RBP16.27■□□□□ 0.19
PPFIA3-206ENST00000602655 SMC6Q96SB8 1091 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms