RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 SYTL2Q9HCH5 934 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 ZSWIM6Q9HCJ5 1215 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 MAN1C1Q9NR34 630 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 MBIPQ9NS73 344 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 NCKIPSDQ9NZQ3 722 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 UBA2Q9UBT2 640 aaPredicted RBP9.35□□□□□ -0.91
COMMD3-215ENST00000602574 DNAJC12Q9UKB3 198 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 HDAC9Q9UKV0 1011 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 PADI4Q9UM07 663 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 AP3M1Q9Y2T2 418 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 KDM3AQ9Y4C1 1321 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 MON2Q7Z3U7 1717 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 MAGEB16A2A368 324 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 OR5K3A6NET4 321 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 PTPN9P43378 593 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 MMP13P45452 471 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 RGS7P49802 495 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 ARHGDIBP52566 201 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 FAM9CQ8IZT9 166 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 SPATA18Q8TC71 538 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 SCFD1Q8WVM8 642 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 PRPF31Q8WWY3 499 aaKnown RBP9.34□□□□□ -0.91
COMMD3-215ENST00000602574 MARVELD3Q96A59 401 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 NLRP4Q96MN2 994 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 ZNF641Q96N77 438 aaPredicted RBP9.34□□□□□ -0.91
COMMD3-215ENST00000602574 ECSITQ9BQ95 431 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 MRPS26Q9BYN8 205 aaKnown RBP9.34□□□□□ -0.91
COMMD3-215ENST00000602574 KIAA1683Q9H0B3 1180 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 RNF38Q9H0F5 515 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 SDHAF3Q9NRP4 125 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 TCEAL9Q9UHQ7 104 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 DOLKQ9UPQ8 538 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 SLC8A2Q9UPR5 921 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 PCDHGA8Q9Y5G5 932 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 AK5Q9Y6K8 562 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 MYH7BA7E2Y1 1941 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 SHOXO15266 292 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 ADCY6O43306 1168 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 TCP1P17987 556 aaKnown RBP9.34□□□□□ -0.91
COMMD3-215ENST00000602574 CXCR2P25025 360 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 MARK3P27448 753 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 RCVRNP35243 200 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 HSPA13P48723 471 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 TRIM28Q13263 835 aaKnown RBP9.34□□□□□ -0.91
COMMD3-215ENST00000602574 C6orf10Q5SRN2 563 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 OLFM4Q6UX06 510 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 FRA10AC1Q70Z53 315 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 CREG2Q8IUH2 290 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 USHBP1Q8N6Y0 703 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 SPATA5Q8NB90 893 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 CDC26Q8NHZ8 85 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 GRAMD1AQ96CP6 724 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 OPALINQ96PE5 141 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 PURBQ96QR8 312 aaKnown RBP9.34□□□□□ -0.91
COMMD3-215ENST00000602574 PHF20Q9BVI0 1012 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 RNF41Q9H4P4 317 aaPredicted RBP9.34□□□□□ -0.91
COMMD3-215ENST00000602574 SH2D4AQ9H788 454 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 SLC38A7Q9NVC3 462 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 DDX18Q9NVP1 670 aaKnown RBP9.34□□□□□ -0.91
COMMD3-215ENST00000602574 TLR7Q9NYK1 1049 aaKnown RBP9.34□□□□□ -0.91
COMMD3-215ENST00000602574 ATP6V1HQ9UI12 483 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 GRID1Q9ULK0 1009 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 PPP2R3BQ9Y5P8 575 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 MYH1P12882 1939 aa9.34□□□□□ -0.91
COMMD3-215ENST00000602574 MROH7-TTC4A0A0A0MT08 1334 aa9.34□□□□□ -0.92
COMMD3-215ENST00000602574 MYH11P35749 1972 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 XRN1Q8IZH2 1706 aaKnown RBP9.33□□□□□ -0.92
COMMD3-215ENST00000602574 ST8SIA5O15466 376 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 MAFO75444 373 aaPredicted RBP9.33□□□□□ -0.92
COMMD3-215ENST00000602574 GMNNO75496 209 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 NPM3O75607 178 aaKnown RBP9.33□□□□□ -0.92
COMMD3-215ENST00000602574 SULT1C4O75897 302 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 SMIM18P0DKX4 95 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 ADAM17P78536 824 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 ECT2LQ008S8 904 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 IFITM2Q01629 132 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 TFAP4Q01664 338 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 CREB5Q02930 508 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 KDSRQ06136 332 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 AIMP1Q12904 312 aaKnown RBP9.33□□□□□ -0.92
COMMD3-215ENST00000602574 USP41Q3LFD5 358 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 KCTD21Q4G0X4 260 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 C4orf50Q6ZRC1 276 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 C16orf71Q8IYS4 520 aaPredicted RBP9.33□□□□□ -0.92
COMMD3-215ENST00000602574 ELMOD2Q8IZ81 293 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 SLC2A14Q8TDB8 520 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 SPOCK2Q92563 424 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 ANKS1AQ92625 1134 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 SYMPKQ92797 1274 aaKnown RBP9.33□□□□□ -0.92
COMMD3-215ENST00000602574 CIDECQ96AQ7 238 aaPredicted RBP9.33□□□□□ -0.92
COMMD3-215ENST00000602574 FAR2Q96K12 515 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 BTBD6Q96KE9 485 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 TM9SF2Q99805 663 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 NUP85Q9BW27 656 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 RHOBTB2Q9BYZ6 727 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 ADNPQ9H2P0 1102 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 TMEM206Q9H813 350 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 SIAEQ9HAT2 523 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 POLD4Q9HCU8 107 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 IL37Q9NZH6 218 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms