RNA–Protein interactions for RNA: ENST00000601869.1

STRN4-222, Transcript of striatin 4, human

Gene STRN4, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-222	ENST00000601869	KIAA1586	Q9HCI6	787 aa		20.7	■□□□□ 0.9
STRN4-222	ENST00000601869	ANGPTL2	Q9UKU9	493 aa		20.7	■□□□□ 0.9
STRN4-222	ENST00000601869	EP400	Q96L91	3159 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	EML1	O00423	815 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	CCNG2	Q16589	344 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	FOXB2	Q5VYV0	432 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	DNAJC17	Q9NVM6	304 aa	Known RBP	20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	IRAK4	Q9NWZ3	460 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	ATRNL1	Q5VV63	1379 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	UBR3	Q6ZT12	1888 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	CAPN9	O14815	690 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	GSC2	O15499	205 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	TYROBP	O43914	113 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	SPAG7	O75391	227 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	CA4	P22748	312 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	RRM1	P23921	792 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	GCA	P28676	217 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	KRT72	Q14CN4	511 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	GRIK5	Q16478	980 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	NOP9	Q86U38	636 aa	Known RBP	20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	ARHGEF19	Q8IW93	802 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	FAM178B	Q8IXR5	827 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	NRG4	Q8WWG1	115 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	SPOCK2	Q92563	424 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	ZNF75CP	Q92670	426 aa	Predicted RBP	20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	NSL1	Q96IY1	281 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	FIZ1	Q96SL8	496 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	RBM15	Q96T37	977 aa	Known RBP eCLIP	20.69	■□□□□ 0.9	2e-7	■□□□□ 8
STRN4-222	ENST00000601869	FETUB	Q9UGM5	382 aa		20.69	■□□□□ 0.9
STRN4-222	ENST00000601869	GAK	O14976	1311 aa		20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	ATMIN	O43313	823 aa	Predicted RBP	20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	SREBF1	P36956	1147 aa		20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	SESN3	P58005	492 aa		20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	ADCY1	Q08828	1119 aa		20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	COG2	Q14746	738 aa		20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	TBC1D25	Q3MII6	688 aa		20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	ACSBG2	Q5FVE4	666 aa		20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	FAM91A1	Q658Y4	838 aa		20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	ZNF746	Q6NUN9	644 aa	Predicted RBP	20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	MTDH	Q86UE4	582 aa	Known RBP	20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	MCUR1	Q96AQ8	359 aa		20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	C9orf72	Q96LT7	481 aa		20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	MYH11	P35749	1972 aa		20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	UMODL1	Q5DID0	1318 aa		20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	GYS1	P13807	737 aa		20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	KRT15	P19012	456 aa		20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	RASA3	Q14644	834 aa		20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	TTBK2	Q6IQ55	1244 aa		20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	RFWD3	Q6PCD5	774 aa		20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	PCDHA1	Q9Y5I3	950 aa		20.68	■□□□□ 0.9
STRN4-222	ENST00000601869	ZNFX1	Q9P2E3	1918 aa	Known RBP	20.67	■□□□□ 0.9
STRN4-222	ENST00000601869	EMSY	Q7Z589	1322 aa		20.67	■□□□□ 0.9
STRN4-222	ENST00000601869		F8W8V4	182 aa		20.67	■□□□□ 0.9
STRN4-222	ENST00000601869	GYG2	O15488	501 aa		20.67	■□□□□ 0.9
STRN4-222	ENST00000601869	SGPL1	O95470	568 aa		20.67	■□□□□ 0.9
STRN4-222	ENST00000601869	AKR1B1	P15121	316 aa		20.67	■□□□□ 0.9
STRN4-222	ENST00000601869	FMO1	Q01740	532 aa		20.67	■□□□□ 0.9
STRN4-222	ENST00000601869	QRICH1	Q2TAL8	776 aa		20.67	■□□□□ 0.9
STRN4-222	ENST00000601869	DPP8	Q6V1X1	898 aa	Predicted RBP	20.67	■□□□□ 0.9
STRN4-222	ENST00000601869	DSTYK	Q6XUX3	929 aa		20.67	■□□□□ 0.9
STRN4-222	ENST00000601869	RPGR	Q92834	1020 aa	Known RBP	20.67	■□□□□ 0.9
STRN4-222	ENST00000601869	IWS1	Q96ST2	819 aa		20.67	■□□□□ 0.9
STRN4-222	ENST00000601869	PCMTD2	Q9NV79	361 aa		20.67	■□□□□ 0.9
STRN4-222	ENST00000601869	DNAJB4	Q9UDY4	337 aa		20.67	■□□□□ 0.9
STRN4-222	ENST00000601869	GRID1	Q9ULK0	1009 aa		20.67	■□□□□ 0.9
STRN4-222	ENST00000601869	PIK3CD	O00329	1044 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	MEIS2	O14770	477 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	KRT36	O76013	467 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	RPA3	P35244	121 aa	Predicted RBP	20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	ALCAM	Q13740	583 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	CERK	Q8TCT0	537 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	ATG4A	Q8WYN0	398 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	BTBD6	Q96KE9	485 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	OLFM3	Q96PB7	478 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	PPP1R12C	Q9BZL4	782 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	AVEN	Q9NQS1	362 aa	Predicted RBP	20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	FAM196B	A6NMK8	535 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	CREB3	O43889	395 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	TBX10	O75333	385 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	CYP4A11	Q02928	519 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	KLF1	Q13351	362 aa	Predicted RBP	20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	TRIP13	Q15645	432 aa	Predicted RBP	20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	C12orf56	Q8IXR9	622 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	PHC3	Q8NDX5	983 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	UIMC1	Q96RL1	719 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	CENPK	Q9BS16	269 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	TRIM55	Q9BYV6	548 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	NPHS2	Q9NP85	383 aa		20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	MTO1	Q9Y2Z2	717 aa	Known RBP	20.66	■□□□□ 0.9
STRN4-222	ENST00000601869	MSH4	O15457	936 aa		20.65	■□□□□ 0.9
STRN4-222	ENST00000601869	PENK	P01210	267 aa	Predicted RBP	20.65	■□□□□ 0.9
STRN4-222	ENST00000601869	GSTT1	P30711	240 aa		20.65	■□□□□ 0.9
STRN4-222	ENST00000601869	MAPK4	P31152	587 aa		20.65	■□□□□ 0.9
STRN4-222	ENST00000601869	SERPINB4	P48594	390 aa		20.65	■□□□□ 0.9
STRN4-222	ENST00000601869	VAMP7	P51809	220 aa		20.65	■□□□□ 0.9
STRN4-222	ENST00000601869	MFAP3	P55082	362 aa		20.65	■□□□□ 0.9
STRN4-222	ENST00000601869	CCDC62	Q6P9F0	684 aa		20.65	■□□□□ 0.9
STRN4-222	ENST00000601869	KIAA0825	Q8IV33	1275 aa		20.65	■□□□□ 0.9

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms