RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 LINC01599Q8WXQ3 324 aa24.26■■□□□ 1.47
IRF3-228ENST00000601291 KAT5Q92993 513 aa24.26■■□□□ 1.47
IRF3-228ENST00000601291 JAKMIP2Q96AA8 810 aa24.26■■□□□ 1.47
IRF3-228ENST00000601291 ZFP42Q96MM3 310 aa24.26■■□□□ 1.47
IRF3-228ENST00000601291 GAD1Q99259 594 aa24.26■■□□□ 1.47
IRF3-228ENST00000601291 CHP1Q99653 195 aa24.26■■□□□ 1.47
IRF3-228ENST00000601291 NIF3L1Q9GZT8 377 aa24.26■■□□□ 1.47
IRF3-228ENST00000601291 XYLT2Q9H1B5 865 aa24.26■■□□□ 1.47
IRF3-228ENST00000601291 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.26■■□□□ 1.47
IRF3-228ENST00000601291 NUB1Q9Y5A7 615 aa24.26■■□□□ 1.47
IRF3-228ENST00000601291 BZW2Q9Y6E2 419 aaKnown RBP24.26■■□□□ 1.47
IRF3-228ENST00000601291 ARL5CA6NH57 179 aa24.25■■□□□ 1.47
IRF3-228ENST00000601291 MEIS3P2A8K0S8 358 aa24.25■■□□□ 1.47
IRF3-228ENST00000601291 GFPT2O94808 682 aa24.25■■□□□ 1.47
IRF3-228ENST00000601291 RFC2P35250 354 aa24.25■■□□□ 1.47
IRF3-228ENST00000601291 GUCY2FP51841 1108 aa24.25■■□□□ 1.47
IRF3-228ENST00000601291 MYO1EQ12965 1108 aa24.25■■□□□ 1.47
IRF3-228ENST00000601291 ZNF667Q5HYK9 610 aa24.25■■□□□ 1.47
IRF3-228ENST00000601291 ZNF598Q86UK7 904 aaKnown RBP24.25■■□□□ 1.47
IRF3-228ENST00000601291 RTN4RL1Q86UN2 441 aaPredicted RBP24.25■■□□□ 1.47
IRF3-228ENST00000601291 SHC3Q92529 594 aa24.25■■□□□ 1.47
IRF3-228ENST00000601291 C18orf25Q96B23 403 aaPredicted RBP24.25■■□□□ 1.47
IRF3-228ENST00000601291 ELMO3Q96BJ8 720 aa24.25■■□□□ 1.47
IRF3-228ENST00000601291 FAXDC2Q96IV6 333 aa24.25■■□□□ 1.47
IRF3-228ENST00000601291 PTGESO14684 152 aa24.25■■□□□ 1.47
IRF3-228ENST00000601291 STAU1O95793 577 aaKnown RBP24.25■■□□□ 1.47
IRF3-228ENST00000601291 EN2P19622 333 aaPredicted RBP24.25■■□□□ 1.47
IRF3-228ENST00000601291 CYLC1P35663 651 aaPredicted RBP24.25■■□□□ 1.47
IRF3-228ENST00000601291 CCDC170Q8IYT3 715 aa24.25■■□□□ 1.47
IRF3-228ENST00000601291 HPDLQ96IR7 371 aa24.25■■□□□ 1.47
IRF3-228ENST00000601291 CCDC42Q96M95 316 aa24.25■■□□□ 1.47
IRF3-228ENST00000601291 PPP1R10Q96QC0 940 aaKnown RBP24.25■■□□□ 1.47
IRF3-228ENST00000601291 DEF6Q9H4E7 631 aa24.25■■□□□ 1.47
IRF3-228ENST00000601291 VRTNQ9H8Y1 702 aa24.25■■□□□ 1.47
IRF3-228ENST00000601291 NHEJ1Q9H9Q4 299 aaPredicted RBP24.25■■□□□ 1.47
IRF3-228ENST00000601291 PRDM5Q9NQX1 630 aaPredicted RBP24.25■■□□□ 1.47
IRF3-228ENST00000601291 ARHGAP20Q9P2F6 1191 aa24.25■■□□□ 1.47
IRF3-228ENST00000601291 PDCD11Q14690 1871 aaKnown RBP24.24■■□□□ 1.47
IRF3-228ENST00000601291 SSU72P8A0A1W2PR75 194 aa24.24■■□□□ 1.47
IRF3-228ENST00000601291 FOXN3O00409 490 aaPredicted RBP24.24■■□□□ 1.47
IRF3-228ENST00000601291 EVI5O60447 810 aa24.24■■□□□ 1.47
IRF3-228ENST00000601291 THP07101 528 aa24.24■■□□□ 1.47
IRF3-228ENST00000601291 PNMA6AP0CW24 399 aaPredicted RBP24.24■■□□□ 1.47
IRF3-228ENST00000601291 P4HA1P13674 534 aa24.24■■□□□ 1.47
IRF3-228ENST00000601291 USP8P40818 1118 aa24.24■■□□□ 1.47
IRF3-228ENST00000601291 PRKCIP41743 596 aa24.24■■□□□ 1.47
IRF3-228ENST00000601291 FAM189BP81408 668 aa24.24■■□□□ 1.47
IRF3-228ENST00000601291 HGSNATQ68CP4 663 aa24.24■■□□□ 1.47
IRF3-228ENST00000601291 SCARA3Q6AZY7 606 aa24.24■■□□□ 1.47
IRF3-228ENST00000601291 RAD9BQ6WBX8 426 aa24.24■■□□□ 1.47
IRF3-228ENST00000601291 GPIHBP1Q8IV16 184 aa24.24■■□□□ 1.47
IRF3-228ENST00000601291 LRRC52Q8N7C0 313 aa24.24■■□□□ 1.47
IRF3-228ENST00000601291 KIAA1524Q8TCG1 905 aa24.24■■□□□ 1.47
IRF3-228ENST00000601291 RNF19AQ9NV58 838 aa24.24■■□□□ 1.47
IRF3-228ENST00000601291 IRF2BP2Q7Z5L9 587 aa24.23■■□□□ 1.47
IRF3-228ENST00000601291 ZNF560Q96MR9 790 aa24.23■■□□□ 1.47
IRF3-228ENST00000601291 ARID3AQ99856 593 aa24.23■■□□□ 1.47
IRF3-228ENST00000601291 ESPNB1AK53 854 aa24.22■■□□□ 1.47
IRF3-228ENST00000601291 KIAA0355O15063 1070 aa24.22■■□□□ 1.47
IRF3-228ENST00000601291 SCNN1GP51170 649 aa24.22■■□□□ 1.47
IRF3-228ENST00000601291 YWHAEP62258 255 aaKnown RBP24.22■■□□□ 1.47
IRF3-228ENST00000601291 MAPK8IP2Q13387 824 aaPredicted RBP24.22■■□□□ 1.47
IRF3-228ENST00000601291 WDR72Q3MJ13 1102 aa24.22■■□□□ 1.47
IRF3-228ENST00000601291 C9orf57Q5W0N0 161 aa24.22■■□□□ 1.47
IRF3-228ENST00000601291 SMYD5Q6GMV2 418 aa24.22■■□□□ 1.47
IRF3-228ENST00000601291 GLB1LQ6UWU2 654 aa24.22■■□□□ 1.47
IRF3-228ENST00000601291 DEFB128Q7Z7B8 93 aa24.22■■□□□ 1.47
IRF3-228ENST00000601291 UBE2Q1Q7Z7E8 422 aa24.22■■□□□ 1.47
IRF3-228ENST00000601291 FAM71AQ8IYT1 594 aa24.22■■□□□ 1.47
IRF3-228ENST00000601291 GSTCDQ8NEC7 633 aa24.22■■□□□ 1.47
IRF3-228ENST00000601291 HAUS4Q9H6D7 363 aa24.22■■□□□ 1.47
IRF3-228ENST00000601291 ELAC1Q9H777 363 aaKnown RBP24.22■■□□□ 1.47
IRF3-228ENST00000601291 RNF216Q9NWF9 866 aaPredicted RBP24.22■■□□□ 1.47
IRF3-228ENST00000601291 TMEM161AQ9NX61 479 aa24.22■■□□□ 1.47
IRF3-228ENST00000601291 NXF1Q9UBU9 619 aaKnown RBP24.22■■□□□ 1.47
IRF3-228ENST00000601291 ENPP3O14638 875 aa24.21■■□□□ 1.47
IRF3-228ENST00000601291 OFD1O75665 1012 aa24.21■■□□□ 1.47
IRF3-228ENST00000601291 IPO7O95373 1038 aaKnown RBP24.21■■□□□ 1.47
IRF3-228ENST00000601291 TIMP1P01033 207 aa24.21■■□□□ 1.47
IRF3-228ENST00000601291 PLEKP08567 350 aaPredicted RBP24.21■■□□□ 1.47
IRF3-228ENST00000601291 KRT5P13647 590 aa24.21■■□□□ 1.47
IRF3-228ENST00000601291 EIF4A3P38919 411 aaKnown RBP24.21■■□□□ 1.47
IRF3-228ENST00000601291 PNPLA4P41247 253 aa24.21■■□□□ 1.47
IRF3-228ENST00000601291 TNNC1P63316 161 aa24.21■■□□□ 1.47
IRF3-228ENST00000601291 MTF1Q14872 753 aa24.21■■□□□ 1.47
IRF3-228ENST00000601291 VPS36Q86VN1 386 aa24.21■■□□□ 1.47
IRF3-228ENST00000601291 TMEM130Q8N3G9 435 aa24.21■■□□□ 1.47
IRF3-228ENST00000601291 EPN1Q9Y6I3 576 aaPredicted RBP24.21■■□□□ 1.47
IRF3-228ENST00000601291 ANO9A1A5B4 782 aa24.2■■□□□ 1.47
IRF3-228ENST00000601291 NDUFA10O95299 355 aa24.2■■□□□ 1.47
IRF3-228ENST00000601291 RAG1P15918 1043 aa24.2■■□□□ 1.47
IRF3-228ENST00000601291 ANXA13P27216 316 aa24.2■■□□□ 1.47
IRF3-228ENST00000601291 LRPAP1P30533 357 aa24.2■■□□□ 1.47
IRF3-228ENST00000601291 ASPAP45381 313 aa24.2■■□□□ 1.47
IRF3-228ENST00000601291 SOX4Q06945 474 aaPredicted RBP24.2■■□□□ 1.47
IRF3-228ENST00000601291 GRIK3Q13003 919 aa24.2■■□□□ 1.47
IRF3-228ENST00000601291 CNKSR3Q6P9H4 555 aa24.2■■□□□ 1.47
IRF3-228ENST00000601291 INPP5FQ9Y2H2 1132 aa24.2■■□□□ 1.47
IRF3-228ENST00000601291 PIRO00625 290 aa24.2■■□□□ 1.46
IRF3-228ENST00000601291 INPPL1O15357 1258 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms