RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 PIRO00625 290 aa17.09■□□□□ 0.33
RPS28-203ENST00000600659 TGM5O43548 720 aa17.09■□□□□ 0.33
RPS28-203ENST00000600659 EXTL3O43909 919 aa17.09■□□□□ 0.33
RPS28-203ENST00000600659 TBC1D4O60343 1298 aa17.09■□□□□ 0.33
RPS28-203ENST00000600659 RHOBTB3O94955 611 aa17.09■□□□□ 0.33
RPS28-203ENST00000600659 ADH1AP07327 375 aa17.09■□□□□ 0.33
RPS28-203ENST00000600659 HOXB8P17481 243 aaPredicted RBP17.09■□□□□ 0.33
RPS28-203ENST00000600659 MRPL58Q14197 206 aaKnown RBP17.09■□□□□ 0.33
RPS28-203ENST00000600659 TMEM132DQ14C87 1099 aa17.09■□□□□ 0.33
RPS28-203ENST00000600659 PSMD5Q16401 504 aa17.09■□□□□ 0.33
RPS28-203ENST00000600659 CEP57Q86XR8 500 aa17.09■□□□□ 0.33
RPS28-203ENST00000600659 GPD1LQ8N335 351 aa17.09■□□□□ 0.33
RPS28-203ENST00000600659 CXorf38Q8TB03 319 aa17.09■□□□□ 0.33
RPS28-203ENST00000600659 APOL5Q9BWW9 433 aa17.09■□□□□ 0.33
RPS28-203ENST00000600659 GZF1Q9H116 711 aaPredicted RBP17.09■□□□□ 0.33
RPS28-203ENST00000600659 KCTD10Q9H3F6 313 aa17.09■□□□□ 0.33
RPS28-203ENST00000600659 MAN1C1Q9NR34 630 aa17.09■□□□□ 0.33
RPS28-203ENST00000600659 DZANK1Q9NVP4 752 aa17.09■□□□□ 0.33
RPS28-203ENST00000600659 HSPBP1Q9NZL4 362 aa17.09■□□□□ 0.33
RPS28-203ENST00000600659 NOTCH4Q99466 2003 aa17.09■□□□□ 0.33
RPS28-203ENST00000600659 PTPRJQ12913 1337 aa17.08■□□□□ 0.33
RPS28-203ENST00000600659 M0QZQ0 153 aa17.08■□□□□ 0.32
RPS28-203ENST00000600659 SPTLC1O15269 473 aa17.08■□□□□ 0.32
RPS28-203ENST00000600659 LDHAP00338 332 aaKnown RBP17.08■□□□□ 0.32
RPS28-203ENST00000600659 C1RP00736 705 aa17.08■□□□□ 0.32
RPS28-203ENST00000600659 SRGAP2BP0DMP2 458 aa17.08■□□□□ 0.32
RPS28-203ENST00000600659 C9orf57Q5W0N0 161 aa17.08■□□□□ 0.32
RPS28-203ENST00000600659 CBWD2Q8IUF1 395 aa17.08■□□□□ 0.32
RPS28-203ENST00000600659 GLYCTKQ8IVS8 523 aa17.08■□□□□ 0.32
RPS28-203ENST00000600659 C12orf56Q8IXR9 622 aa17.08■□□□□ 0.32
RPS28-203ENST00000600659 TMEM87AQ8NBN3 555 aa17.08■□□□□ 0.32
RPS28-203ENST00000600659 EXOC1Q9NV70 894 aa17.08■□□□□ 0.32
RPS28-203ENST00000600659 RBAKQ9NYW8 714 aaPredicted RBP17.08■□□□□ 0.32
RPS28-203ENST00000600659 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.08■□□□□ 0.32
RPS28-203ENST00000600659 SYN3O14994 580 aa17.07■□□□□ 0.32
RPS28-203ENST00000600659 KIAA0391O15091 583 aaKnown RBP17.07■□□□□ 0.32
RPS28-203ENST00000600659 GADD45BO75293 160 aaPredicted RBP17.07■□□□□ 0.32
RPS28-203ENST00000600659 IL18RAPO95256 599 aa17.07■□□□□ 0.32
RPS28-203ENST00000600659 GLUD1P00367 558 aa17.07■□□□□ 0.32
RPS28-203ENST00000600659 ANP32AP39687 249 aaKnown RBP17.07■□□□□ 0.32
RPS28-203ENST00000600659 CREMQ03060 361 aa17.07■□□□□ 0.32
RPS28-203ENST00000600659 FAM160A1Q05DH4 1040 aa17.07■□□□□ 0.32
RPS28-203ENST00000600659 PSMD2Q13200 908 aa17.07■□□□□ 0.32
RPS28-203ENST00000600659 KNOP1Q1ED39 458 aaKnown RBP17.07■□□□□ 0.32
RPS28-203ENST00000600659 VARS2Q5ST30 1063 aaKnown RBP17.07■□□□□ 0.32
RPS28-203ENST00000600659 BEST2Q8NFU1 509 aa17.07■□□□□ 0.32
RPS28-203ENST00000600659 KHSRPQ92945 711 aaKnown RBP eCLIP17.07■□□□□ 0.32
RPS28-203ENST00000600659 ADAM7Q9H2U9 754 aa17.07■□□□□ 0.32
RPS28-203ENST00000600659 PDE11AQ9HCR9 933 aa17.07■□□□□ 0.32
RPS28-203ENST00000600659 CHMP5Q9NZZ3 219 aa17.07■□□□□ 0.32
RPS28-203ENST00000600659 FBXW11Q9UKB1 542 aa17.07■□□□□ 0.32
RPS28-203ENST00000600659 BACE2Q9Y5Z0 518 aa17.07■□□□□ 0.32
RPS28-203ENST00000600659 CLIC2O15247 247 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 XPOTO43592 962 aaKnown RBP17.06■□□□□ 0.32
RPS28-203ENST00000600659 TRAPPC3O43617 180 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 WEE2P0C1S8 567 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 SPATA31D3P0C874 917 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 MCM4P33991 863 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 SNRPFP62306 86 aaKnown RBP17.06■□□□□ 0.32
RPS28-203ENST00000600659 PNOCQ13519 176 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 KCNB1Q14721 858 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 CBX2Q14781 532 aaPredicted RBP17.06■□□□□ 0.32
RPS28-203ENST00000600659 RARS2Q5T160 578 aaKnown RBP17.06■□□□□ 0.32
RPS28-203ENST00000600659 SPATA31D4Q6ZUB0 917 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 PALB2Q86YC2 1186 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 NT5DC4Q86YG4 428 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 ADHFE1Q8IWW8 467 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 C1orf127Q8N9H9 656 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 SPATA20Q8TB22 786 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 TMEM174Q8WUU8 243 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 BORCS6Q96GS4 357 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 SFXN1Q9H9B4 322 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 DMAC2Q9NW81 257 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 PRKAG3Q9UGI9 489 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 PCDHB8Q9UN66 801 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 NUB1Q9Y5A7 615 aa17.06■□□□□ 0.32
RPS28-203ENST00000600659 RFPL2O75678 378 aa17.05■□□□□ 0.32
RPS28-203ENST00000600659 LILRA4P59901 499 aa17.05■□□□□ 0.32
RPS28-203ENST00000600659 ITIH3Q06033 890 aa17.05■□□□□ 0.32
RPS28-203ENST00000600659 RAB33AQ14088 237 aa17.05■□□□□ 0.32
RPS28-203ENST00000600659 SLC8B1Q6J4K2 584 aa17.05■□□□□ 0.32
RPS28-203ENST00000600659 PDXDC1Q6P996 788 aa17.05■□□□□ 0.32
RPS28-203ENST00000600659 TMC5Q6UXY8 1006 aa17.05■□□□□ 0.32
RPS28-203ENST00000600659 ANKS3Q6ZW76 656 aa17.05■□□□□ 0.32
RPS28-203ENST00000600659 CMASQ8NFW8 434 aaPredicted RBP17.05■□□□□ 0.32
RPS28-203ENST00000600659 ZNF707Q96C28 371 aaPredicted RBP17.05■□□□□ 0.32
RPS28-203ENST00000600659 POMKQ9H5K3 350 aa17.05■□□□□ 0.32
RPS28-203ENST00000600659 DPP3Q9NY33 737 aa17.05■□□□□ 0.32
RPS28-203ENST00000600659 SIX4Q9UIU6 781 aa17.05■□□□□ 0.32
RPS28-203ENST00000600659 FAM50BQ9Y247 325 aa17.05■□□□□ 0.32
RPS28-203ENST00000600659 CDY1Q9Y6F8 540 aa17.05■□□□□ 0.32
RPS28-203ENST00000600659 WDR27A2RRH5 827 aa17.04■□□□□ 0.32
RPS28-203ENST00000600659 LOC730098B7Z3J9 87 aa17.04■□□□□ 0.32
RPS28-203ENST00000600659 TNFRSF10AO00220 468 aa17.04■□□□□ 0.32
RPS28-203ENST00000600659 OR1D2P34982 312 aa17.04■□□□□ 0.32
RPS28-203ENST00000600659 CYP2J2P51589 502 aa17.04■□□□□ 0.32
RPS28-203ENST00000600659 ROR1Q01973 937 aa17.04■□□□□ 0.32
RPS28-203ENST00000600659 LMBRD2Q68DH5 695 aaPredicted RBP17.04■□□□□ 0.32
RPS28-203ENST00000600659 GPR149Q86SP6 731 aa17.04■□□□□ 0.32
RPS28-203ENST00000600659 OR5B17Q8NGF7 314 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms