RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 EFCAB13Q8IY85 973 aa19.13■□□□□ 0.65
USHBP1-209ENST00000598570 GOLGA5Q8TBA6 731 aa19.13■□□□□ 0.65
USHBP1-209ENST00000598570 RIN2Q8WYP3 895 aaPredicted RBP19.13■□□□□ 0.65
USHBP1-209ENST00000598570 BORCS6Q96GS4 357 aa19.13■□□□□ 0.65
USHBP1-209ENST00000598570 B3GALT6Q96L58 329 aa19.13■□□□□ 0.65
USHBP1-209ENST00000598570 EXOC1Q9NV70 894 aa19.13■□□□□ 0.65
USHBP1-209ENST00000598570 HSPBP1Q9NZL4 362 aa19.13■□□□□ 0.65
USHBP1-209ENST00000598570 SCN1AP35498 2009 aa19.13■□□□□ 0.65
USHBP1-209ENST00000598570 PLXNA3P51805 1871 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 PDXKO00764 312 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 OAZ2O95190 189 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 CSPG5O95196 566 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 EPCAMP16422 314 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 LILRA4P59901 499 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 CLDN10P78369 228 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 ITIH3Q06033 890 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 SPAG1Q07617 926 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 RAB33AQ14088 237 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 C9orf57Q5W0N0 161 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 SLC8B1Q6J4K2 584 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 KIAA1841Q6NSI8 718 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 ARMCX5Q6P1M9 558 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 CYP26C1Q6V0L0 522 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 RTL10Q7L3V2 364 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 BEST2Q8NFU1 509 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 HASPINQ8TF76 798 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 SAAL1Q96ER3 474 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 MFSD14AQ96MC6 490 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 GSDMAQ96QA5 445 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 GZF1Q9H116 711 aaPredicted RBP19.12■□□□□ 0.65
USHBP1-209ENST00000598570 ADAM7Q9H2U9 754 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 TRAF3IP3Q9Y228 551 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 FAM50BQ9Y247 325 aa19.12■□□□□ 0.65
USHBP1-209ENST00000598570 GOLGA6L4A6NEF3 574 aa19.11■□□□□ 0.65
USHBP1-209ENST00000598570 ZNF233A6NK53 670 aa19.11■□□□□ 0.65
USHBP1-209ENST00000598570 GADD45BO75293 160 aaPredicted RBP19.11■□□□□ 0.65
USHBP1-209ENST00000598570 KLRC2P26717 231 aa19.11■□□□□ 0.65
USHBP1-209ENST00000598570 BRCC3P46736 316 aa19.11■□□□□ 0.65
USHBP1-209ENST00000598570 TPRNQ4KMQ1 711 aa19.11■□□□□ 0.65
USHBP1-209ENST00000598570 RSPO2Q6UXX9 243 aaPredicted RBP19.11■□□□□ 0.65
USHBP1-209ENST00000598570 ANKS3Q6ZW76 656 aa19.11■□□□□ 0.65
USHBP1-209ENST00000598570 TMEM130Q8N3G9 435 aa19.11■□□□□ 0.65
USHBP1-209ENST00000598570 GUF1Q8N442 669 aaKnown RBP19.11■□□□□ 0.65
USHBP1-209ENST00000598570 ADAMTS19Q8TE59 1207 aa19.11■□□□□ 0.65
USHBP1-209ENST00000598570 CCDC34Q96HJ3 373 aa19.11■□□□□ 0.65
USHBP1-209ENST00000598570 PLEKHA4Q9H4M7 779 aa19.11■□□□□ 0.65
USHBP1-209ENST00000598570 PCIF1Q9H4Z3 704 aa19.11■□□□□ 0.65
USHBP1-209ENST00000598570 RBAKQ9NYW8 714 aaPredicted RBP19.11■□□□□ 0.65
USHBP1-209ENST00000598570 PCDHB8Q9UN66 801 aa19.11■□□□□ 0.65
USHBP1-209ENST00000598570 CYP11A1P05108 521 aa19.1■□□□□ 0.65
USHBP1-209ENST00000598570 TKTP29401 623 aaKnown RBP19.1■□□□□ 0.65
USHBP1-209ENST00000598570 SURF1Q15526 300 aa19.1■□□□□ 0.65
USHBP1-209ENST00000598570 ZCWPW2Q504Y3 356 aa19.1■□□□□ 0.65
USHBP1-209ENST00000598570 PRSS55Q6UWB4 352 aaPredicted RBP19.1■□□□□ 0.65
USHBP1-209ENST00000598570 HS2ST1Q7LGA3 356 aa19.1■□□□□ 0.65
USHBP1-209ENST00000598570 LIMS2Q7Z4I7 341 aa19.1■□□□□ 0.65
USHBP1-209ENST00000598570 CBWD2Q8IUF1 395 aa19.1■□□□□ 0.65
USHBP1-209ENST00000598570 XXYLT1Q8NBI6 393 aa19.1■□□□□ 0.65
USHBP1-209ENST00000598570 OXCT2Q9BYC2 517 aaPredicted RBP19.1■□□□□ 0.65
USHBP1-209ENST00000598570 GTPBP4Q9BZE4 634 aaKnown RBP19.1■□□□□ 0.65
USHBP1-209ENST00000598570 DPP3Q9NY33 737 aa19.1■□□□□ 0.65
USHBP1-209ENST00000598570 DPP7Q9UHL4 492 aa19.1■□□□□ 0.65
USHBP1-209ENST00000598570 C2CD2LO14523 706 aa19.09■□□□□ 0.65
USHBP1-209ENST00000598570 PPEF2O14830 753 aa19.09■□□□□ 0.65
USHBP1-209ENST00000598570 SPTLC1O15269 473 aa19.09■□□□□ 0.65
USHBP1-209ENST00000598570 ADAM12O43184 909 aa19.09■□□□□ 0.65
USHBP1-209ENST00000598570 TGM5O43548 720 aa19.09■□□□□ 0.65
USHBP1-209ENST00000598570 ABLIM3O94929 683 aa19.09■□□□□ 0.65
USHBP1-209ENST00000598570 POU2F2P09086 479 aa19.09■□□□□ 0.65
USHBP1-209ENST00000598570 IL9P15248 144 aa19.09■□□□□ 0.65
USHBP1-209ENST00000598570 TYMPP19971 482 aa19.09■□□□□ 0.65
USHBP1-209ENST00000598570 GUCY2FP51841 1108 aa19.09■□□□□ 0.65
USHBP1-209ENST00000598570 CBX2Q14781 532 aaPredicted RBP19.09■□□□□ 0.65
USHBP1-209ENST00000598570 PSMD6Q15008 389 aa19.09■□□□□ 0.65
USHBP1-209ENST00000598570 PSMD5Q16401 504 aa19.09■□□□□ 0.65
USHBP1-209ENST00000598570 SNRNP35Q16560 246 aaKnown RBP19.09■□□□□ 0.65
USHBP1-209ENST00000598570 VARS2Q5ST30 1063 aaKnown RBP19.09■□□□□ 0.65
USHBP1-209ENST00000598570 C15orf39Q6ZRI6 1047 aa19.09■□□□□ 0.65
USHBP1-209ENST00000598570 NELFCDQ8IXH7 590 aa19.09■□□□□ 0.65
USHBP1-209ENST00000598570 PDE11AQ9HCR9 933 aa19.09■□□□□ 0.65
USHBP1-209ENST00000598570 MAFFQ9ULX9 164 aa19.09■□□□□ 0.65
USHBP1-209ENST00000598570 USP15Q9Y4E8 981 aaPredicted RBP19.09■□□□□ 0.65
USHBP1-209ENST00000598570 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.08■□□□□ 0.64
USHBP1-209ENST00000598570 GOLGA8IPA6NC78 632 aa19.08■□□□□ 0.64
USHBP1-209ENST00000598570 GOLGA8JA6NMD2 632 aa19.08■□□□□ 0.64
USHBP1-209ENST00000598570 I3L4J1 428 aa19.08■□□□□ 0.64
USHBP1-209ENST00000598570 MAPK13O15264 365 aa19.08■□□□□ 0.64
USHBP1-209ENST00000598570 KIF20AO95235 890 aa19.08■□□□□ 0.64
USHBP1-209ENST00000598570 GLUD1P00367 558 aa19.08■□□□□ 0.64
USHBP1-209ENST00000598570 UBE2HP62256 183 aa19.08■□□□□ 0.64
USHBP1-209ENST00000598570 ZP2Q05996 745 aa19.08■□□□□ 0.64
USHBP1-209ENST00000598570 ENPEPQ07075 957 aa19.08■□□□□ 0.64
USHBP1-209ENST00000598570 PNOCQ13519 176 aa19.08■□□□□ 0.64
USHBP1-209ENST00000598570 LLGL2Q6P1M3 1020 aa19.08■□□□□ 0.64
USHBP1-209ENST00000598570 GPR149Q86SP6 731 aa19.08■□□□□ 0.64
USHBP1-209ENST00000598570 ADHFE1Q8IWW8 467 aa19.08■□□□□ 0.64
USHBP1-209ENST00000598570 C1orf127Q8N9H9 656 aa19.08■□□□□ 0.64
USHBP1-209ENST00000598570 APPL2Q8NEU8 664 aa19.08■□□□□ 0.64
USHBP1-209ENST00000598570 CACTINQ8WUQ7 758 aaKnown RBP19.08■□□□□ 0.64
USHBP1-209ENST00000598570 INTS13Q9NVM9 706 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms