RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 KIAA0895Q8NCT3 520 aa24.73■■□□□ 1.55
IRF3-220ENST00000598108 BEST2Q8NFU1 509 aa24.73■■□□□ 1.55
IRF3-220ENST00000598108 MAN1C1Q9NR34 630 aa24.73■■□□□ 1.55
IRF3-220ENST00000598108 AGPAT3Q9NRZ7 376 aa24.73■■□□□ 1.55
IRF3-220ENST00000598108 EXOC1Q9NV70 894 aa24.73■■□□□ 1.55
IRF3-220ENST00000598108 PRKAG3Q9UGI9 489 aa24.73■■□□□ 1.55
IRF3-220ENST00000598108 C2CD2Q9Y426 696 aa24.73■■□□□ 1.55
IRF3-220ENST00000598108 UBE4BO95155 1302 aa24.72■■□□□ 1.55
IRF3-220ENST00000598108 C19orf67A6NJJ6 358 aa24.72■■□□□ 1.55
IRF3-220ENST00000598108 TULP1O00294 542 aaPredicted RBP24.72■■□□□ 1.55
IRF3-220ENST00000598108 IL18RAPO95256 599 aa24.72■■□□□ 1.55
IRF3-220ENST00000598108 LDHAP00338 332 aaKnown RBP24.72■■□□□ 1.55
IRF3-220ENST00000598108 RPN1P04843 607 aaKnown RBP24.72■■□□□ 1.55
IRF3-220ENST00000598108 MCM4P33991 863 aa24.72■■□□□ 1.55
IRF3-220ENST00000598108 ITIH3Q06033 890 aa24.72■■□□□ 1.55
IRF3-220ENST00000598108 CBX2Q14781 532 aaPredicted RBP24.72■■□□□ 1.55
IRF3-220ENST00000598108 VARS2Q5ST30 1063 aaKnown RBP24.72■■□□□ 1.55
IRF3-220ENST00000598108 C9orf57Q5W0N0 161 aa24.72■■□□□ 1.55
IRF3-220ENST00000598108 ENGASEQ8NFI3 743 aa24.72■■□□□ 1.55
IRF3-220ENST00000598108 NOC3LQ8WTT2 800 aaKnown RBP24.72■■□□□ 1.55
IRF3-220ENST00000598108 FAM84AQ96KN4 292 aa24.72■■□□□ 1.55
IRF3-220ENST00000598108 RBAKQ9NYW8 714 aaPredicted RBP24.72■■□□□ 1.55
IRF3-220ENST00000598108 HSPBP1Q9NZL4 362 aa24.72■■□□□ 1.55
IRF3-220ENST00000598108 MTRRQ9UBK8 725 aa24.72■■□□□ 1.55
IRF3-220ENST00000598108 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.72■■□□□ 1.55
IRF3-220ENST00000598108 CITO14578 2027 aa24.71■■□□□ 1.55
IRF3-220ENST00000598108 NCOR1O75376 2440 aa24.71■■□□□ 1.55
IRF3-220ENST00000598108 ANO9A1A5B4 782 aa24.71■■□□□ 1.55
IRF3-220ENST00000598108 GOLGA6L4A6NEF3 574 aa24.71■■□□□ 1.55
IRF3-220ENST00000598108 PIRO00625 290 aa24.71■■□□□ 1.55
IRF3-220ENST00000598108 CLIC2O15247 247 aa24.71■■□□□ 1.55
IRF3-220ENST00000598108 OR1D2P34982 312 aa24.71■■□□□ 1.55
IRF3-220ENST00000598108 AARSP49588 968 aaKnown RBP eCLIP24.71■■□□□ 1.552e-7■■■■□ 26.2
IRF3-220ENST00000598108 PSMD2Q13200 908 aa24.71■■□□□ 1.55
IRF3-220ENST00000598108 SNW1Q13573 536 aaKnown RBP24.71■■□□□ 1.55
IRF3-220ENST00000598108 MRPL58Q14197 206 aaKnown RBP24.71■■□□□ 1.55
IRF3-220ENST00000598108 KNOP1Q1ED39 458 aaKnown RBP24.71■■□□□ 1.55
IRF3-220ENST00000598108 SCARA3Q6AZY7 606 aa24.71■■□□□ 1.55
IRF3-220ENST00000598108 PDXDC1Q6P996 788 aa24.71■■□□□ 1.55
IRF3-220ENST00000598108 ANKS3Q6ZW76 656 aa24.71■■□□□ 1.55
IRF3-220ENST00000598108 CBWD2Q8IUF1 395 aa24.71■■□□□ 1.55
IRF3-220ENST00000598108 GPD1LQ8N335 351 aa24.71■■□□□ 1.55
IRF3-220ENST00000598108 SFXN1Q9H9B4 322 aa24.71■■□□□ 1.55
IRF3-220ENST00000598108 PDE11AQ9HCR9 933 aa24.71■■□□□ 1.55
IRF3-220ENST00000598108 DPP3Q9NY33 737 aa24.71■■□□□ 1.55
IRF3-220ENST00000598108 BACE2Q9Y5Z0 518 aa24.71■■□□□ 1.55
IRF3-220ENST00000598108 SYN3O14994 580 aa24.7■■□□□ 1.54
IRF3-220ENST00000598108 SPTLC1O15269 473 aa24.7■■□□□ 1.54
IRF3-220ENST00000598108 TBC1D4O60343 1298 aa24.7■■□□□ 1.54
IRF3-220ENST00000598108 C1RP00736 705 aa24.7■■□□□ 1.54
IRF3-220ENST00000598108 ANP32AP39687 249 aaKnown RBP24.7■■□□□ 1.54
IRF3-220ENST00000598108 RAB33AQ14088 237 aa24.7■■□□□ 1.54
IRF3-220ENST00000598108 CES5AQ6NT32 575 aa24.7■■□□□ 1.54
IRF3-220ENST00000598108 KREMEN2Q8NCW0 462 aa24.7■■□□□ 1.54
IRF3-220ENST00000598108 KHSRPQ92945 711 aaKnown RBP eCLIP24.7■■□□□ 1.54
IRF3-220ENST00000598108 PHF7Q9BWX1 381 aaPredicted RBP24.7■■□□□ 1.54
IRF3-220ENST00000598108 PCDHB8Q9UN66 801 aa24.7■■□□□ 1.54
IRF3-220ENST00000598108 M0QZQ0 153 aa24.69■■□□□ 1.54
IRF3-220ENST00000598108 KIAA0391O15091 583 aaKnown RBP24.69■■□□□ 1.54
IRF3-220ENST00000598108 RFPL2O75678 378 aa24.69■■□□□ 1.54
IRF3-220ENST00000598108 SSTR3P32745 418 aaPredicted RBP24.69■■□□□ 1.54
IRF3-220ENST00000598108 LILRA4P59901 499 aa24.69■■□□□ 1.54
IRF3-220ENST00000598108 TIMM13Q9Y5L4 95 aaPredicted RBP24.69■■□□□ 1.54
IRF3-220ENST00000598108 CDY1Q9Y6F8 540 aa24.69■■□□□ 1.54
IRF3-220ENST00000598108 ZNF233A6NK53 670 aa24.68■■□□□ 1.54
IRF3-220ENST00000598108 SPDYE4A6NLX3 237 aa24.68■■□□□ 1.54
IRF3-220ENST00000598108 RHOBTB3O94955 611 aa24.68■■□□□ 1.54
IRF3-220ENST00000598108 CYP2J2P51589 502 aa24.68■■□□□ 1.54
IRF3-220ENST00000598108 SNRPFP62306 86 aaKnown RBP24.68■■□□□ 1.54
IRF3-220ENST00000598108 TFAMQ00059 246 aaKnown RBP24.68■■□□□ 1.54
IRF3-220ENST00000598108 ATAT1Q5SQI0 421 aa24.68■■□□□ 1.54
IRF3-220ENST00000598108 HS2ST1Q7LGA3 356 aa24.68■■□□□ 1.54
IRF3-220ENST00000598108 GPR149Q86SP6 731 aa24.68■■□□□ 1.54
IRF3-220ENST00000598108 RDH13Q8NBN7 331 aa24.68■■□□□ 1.54
IRF3-220ENST00000598108 HDAC7Q8WUI4 952 aa24.68■■□□□ 1.54
IRF3-220ENST00000598108 PLEKHA4Q9H4M7 779 aa24.68■■□□□ 1.54
IRF3-220ENST00000598108 POMKQ9H5K3 350 aa24.68■■□□□ 1.54
IRF3-220ENST00000598108 CHMP5Q9NZZ3 219 aa24.68■■□□□ 1.54
IRF3-220ENST00000598108 BDP1A6H8Y1 2624 aa24.68■■□□□ 1.54
IRF3-220ENST00000598108 CCDC195A0A1B0GUA6 201 aa24.67■■□□□ 1.54
IRF3-220ENST00000598108 FAM160A1Q05DH4 1040 aa24.67■■□□□ 1.54
IRF3-220ENST00000598108 NT5DC4Q86YG4 428 aa24.67■■□□□ 1.54
IRF3-220ENST00000598108 CMASQ8NFW8 434 aaPredicted RBP24.67■■□□□ 1.54
IRF3-220ENST00000598108 ZNF707Q96C28 371 aaPredicted RBP24.67■■□□□ 1.54
IRF3-220ENST00000598108 RPGRIP1Q96KN7 1286 aa24.67■■□□□ 1.54
IRF3-220ENST00000598108 KCTD10Q9H3F6 313 aa24.67■■□□□ 1.54
IRF3-220ENST00000598108 DPP7Q9UHL4 492 aa24.67■■□□□ 1.54
IRF3-220ENST00000598108 FBXL5Q9UKA1 691 aa24.67■■□□□ 1.54
IRF3-220ENST00000598108 FBXW11Q9UKB1 542 aa24.67■■□□□ 1.54
IRF3-220ENST00000598108 LOC730098B7Z3J9 87 aa24.66■■□□□ 1.54
IRF3-220ENST00000598108 GADD45BO75293 160 aaPredicted RBP24.66■■□□□ 1.54
IRF3-220ENST00000598108 MTHFRP42898 656 aa24.66■■□□□ 1.54
IRF3-220ENST00000598108 PNOCQ13519 176 aa24.66■■□□□ 1.54
IRF3-220ENST00000598108 LMBRD2Q68DH5 695 aaPredicted RBP24.66■■□□□ 1.54
IRF3-220ENST00000598108 SLC8B1Q6J4K2 584 aa24.66■■□□□ 1.54
IRF3-220ENST00000598108 DSTYKQ6XUX3 929 aa24.66■■□□□ 1.54
IRF3-220ENST00000598108 C12orf56Q8IXR9 622 aa24.66■■□□□ 1.54
IRF3-220ENST00000598108 C1orf127Q8N9H9 656 aa24.66■■□□□ 1.54
IRF3-220ENST00000598108 APPL2Q8NEU8 664 aa24.66■■□□□ 1.54
IRF3-220ENST00000598108 CXorf38Q8TB03 319 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms