RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 ANKRD36BP1Q96IX9 119 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 CEP63Q96MT8 703 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 DUSP9Q99956 384 aaKnown RBP21.97■■□□□ 1.11
PNKP-211ENST00000598020 TMEM63CQ9P1W3 806 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 RWDD2AQ9UIY3 292 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 ITGA11Q9UKX5 1188 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 CTNND2Q9UQB3 1225 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 PTPRJQ12913 1337 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 SCN1AP35498 2009 aa21.96■■□□□ 1.11
PNKP-211ENST00000598020 IKBKBO14920 756 aa21.96■■□□□ 1.11
PNKP-211ENST00000598020 TMEM191BP0C7N4 346 aa21.96■■□□□ 1.11
PNKP-211ENST00000598020 DLATP10515 647 aaKnown RBP21.96■■□□□ 1.11
PNKP-211ENST00000598020 TNNI1P19237 187 aa21.96■■□□□ 1.11
PNKP-211ENST00000598020 FGFR3P22607 806 aa21.96■■□□□ 1.11
PNKP-211ENST00000598020 GLUD2P49448 558 aa21.96■■□□□ 1.11
PNKP-211ENST00000598020 PTPN14Q15678 1187 aa21.96■■□□□ 1.11
PNKP-211ENST00000598020 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.96■■□□□ 1.11
PNKP-211ENST00000598020 FAM186BQ8IYM0 893 aa21.96■■□□□ 1.11
PNKP-211ENST00000598020 PPP2R3CQ969Q6 453 aa21.96■■□□□ 1.11
PNKP-211ENST00000598020 SYAP1Q96A49 352 aaPredicted RBP21.96■■□□□ 1.11
PNKP-211ENST00000598020 SUSD3Q96L08 255 aa21.96■■□□□ 1.11
PNKP-211ENST00000598020 POP1Q99575 1024 aaKnown RBP21.96■■□□□ 1.11
PNKP-211ENST00000598020 MTMR12Q9C0I1 747 aa21.96■■□□□ 1.11
PNKP-211ENST00000598020 MRPL17Q9NRX2 175 aaKnown RBP21.96■■□□□ 1.11
PNKP-211ENST00000598020 NUB1Q9Y5A7 615 aa21.96■■□□□ 1.11
PNKP-211ENST00000598020 C2orf71A6NGG8 1288 aa21.95■■□□□ 1.1
PNKP-211ENST00000598020 LRRIQ3A6PVS8 624 aaPredicted RBP21.95■■□□□ 1.1
PNKP-211ENST00000598020 PPEF2O14830 753 aa21.95■■□□□ 1.1
PNKP-211ENST00000598020 SYN3O14994 580 aa21.95■■□□□ 1.1
PNKP-211ENST00000598020 CXCL14O95715 111 aa21.95■■□□□ 1.1
PNKP-211ENST00000598020 TNNC2P02585 160 aa21.95■■□□□ 1.1
PNKP-211ENST00000598020 URODP06132 367 aa21.95■■□□□ 1.1
PNKP-211ENST00000598020 BRCC3P46736 316 aa21.95■■□□□ 1.1
PNKP-211ENST00000598020 LILRA4P59901 499 aa21.95■■□□□ 1.1
PNKP-211ENST00000598020 DPCR1Q3MIW9 517 aa21.95■■□□□ 1.1
PNKP-211ENST00000598020 FAM171A1Q5VUB5 890 aa21.95■■□□□ 1.1
PNKP-211ENST00000598020 PLPP4Q5VZY2 271 aa21.95■■□□□ 1.1
PNKP-211ENST00000598020 LMBRD2Q68DH5 695 aaPredicted RBP21.95■■□□□ 1.1
PNKP-211ENST00000598020 FILIP1Q7Z7B0 1213 aa21.95■■□□□ 1.1
PNKP-211ENST00000598020 ZNF516Q92618 1163 aa21.95■■□□□ 1.1
PNKP-211ENST00000598020 TTPALQ9BTX7 342 aa21.95■■□□□ 1.1
PNKP-211ENST00000598020 RXFP1Q9HBX9 757 aa21.95■■□□□ 1.1
PNKP-211ENST00000598020 DACH1Q9UI36 760 aa21.95■■□□□ 1.1
PNKP-211ENST00000598020 SIX4Q9UIU6 781 aa21.95■■□□□ 1.1
PNKP-211ENST00000598020 VWA8A3KMH1 1905 aa21.95■■□□□ 1.1
PNKP-211ENST00000598020 HIDE1A8MVS5 230 aa21.94■■□□□ 1.1
PNKP-211ENST00000598020 M0QZQ0 153 aa21.94■■□□□ 1.1
PNKP-211ENST00000598020 EPB41P11171 864 aaKnown RBP21.94■■□□□ 1.1
PNKP-211ENST00000598020 ERCC5P28715 1186 aaPredicted RBP21.94■■□□□ 1.1
PNKP-211ENST00000598020 PNPLA4P41247 253 aa21.94■■□□□ 1.1
PNKP-211ENST00000598020 VAMP7P51809 220 aa21.94■■□□□ 1.1
PNKP-211ENST00000598020 RBP5P82980 135 aa21.94■■□□□ 1.1
PNKP-211ENST00000598020 BFSP1Q12934 665 aa21.94■■□□□ 1.1
PNKP-211ENST00000598020 TCEAL5Q5H9L2 206 aa21.94■■□□□ 1.1
PNKP-211ENST00000598020 KIAA1841Q6NSI8 718 aa21.94■■□□□ 1.1
PNKP-211ENST00000598020 PDXDC1Q6P996 788 aa21.94■■□□□ 1.1
PNKP-211ENST00000598020 TRAPPC11Q7Z392 1133 aa21.94■■□□□ 1.1
PNKP-211ENST00000598020 CSGALNACT2Q8N6G5 542 aa21.94■■□□□ 1.1
PNKP-211ENST00000598020 LRRC52Q8N7C0 313 aa21.94■■□□□ 1.1
PNKP-211ENST00000598020 ZNF560Q96MR9 790 aa21.94■■□□□ 1.1
PNKP-211ENST00000598020 CDCA3Q99618 268 aaPredicted RBP21.94■■□□□ 1.1
PNKP-211ENST00000598020 PCDHGC5Q9Y5F6 944 aa21.94■■□□□ 1.1
PNKP-211ENST00000598020 FSD2A1L4K1 749 aa21.93■■□□□ 1.1
PNKP-211ENST00000598020 NCK2O43639 380 aa21.93■■□□□ 1.1
PNKP-211ENST00000598020 ITGB3P05106 788 aa21.93■■□□□ 1.1
PNKP-211ENST00000598020 KRT13P13646 458 aa21.93■■□□□ 1.1
PNKP-211ENST00000598020 POLR2BP30876 1174 aaKnown RBP21.93■■□□□ 1.1
PNKP-211ENST00000598020 TAF6P49848 677 aa21.93■■□□□ 1.1
PNKP-211ENST00000598020 STX17P56962 302 aa21.93■■□□□ 1.1
PNKP-211ENST00000598020 COL19A1Q14993 1142 aa21.93■■□□□ 1.1
PNKP-211ENST00000598020 SKOR2Q2VWA4 1001 aaPredicted RBP21.93■■□□□ 1.1
PNKP-211ENST00000598020 RTP2Q5QGT7 225 aa21.93■■□□□ 1.1
PNKP-211ENST00000598020 C1orf220Q5T0J3 134 aa21.93■■□□□ 1.1
PNKP-211ENST00000598020 ADGRD2Q7Z7M1 963 aa21.93■■□□□ 1.1
PNKP-211ENST00000598020 MAFAQ8NHW3 353 aaPredicted RBP21.93■■□□□ 1.1
PNKP-211ENST00000598020 PIK3R5Q8WYR1 880 aa21.93■■□□□ 1.1
PNKP-211ENST00000598020 EEF2KMTQ96G04 330 aa21.93■■□□□ 1.1
PNKP-211ENST00000598020 FAM84AQ96KN4 292 aa21.93■■□□□ 1.1
PNKP-211ENST00000598020 MED15Q96RN5 788 aa21.93■■□□□ 1.1
PNKP-211ENST00000598020 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.93■■□□□ 1.1
PNKP-211ENST00000598020 FNIP2Q9P278 1114 aa21.93■■□□□ 1.1
PNKP-211ENST00000598020 PCDHB8Q9UN66 801 aa21.93■■□□□ 1.1
PNKP-211ENST00000598020 AGAP1Q9UPQ3 857 aa21.93■■□□□ 1.1
PNKP-211ENST00000598020 I3L4J1 428 aa21.92■■□□□ 1.1
PNKP-211ENST00000598020 TULP1O00294 542 aaPredicted RBP21.92■■□□□ 1.1
PNKP-211ENST00000598020 SPTLC1O15269 473 aa21.92■■□□□ 1.1
PNKP-211ENST00000598020 C4BPAP04003 597 aaKnown RBP21.92■■□□□ 1.1
PNKP-211ENST00000598020 DLG4P78352 724 aa21.92■■□□□ 1.1
PNKP-211ENST00000598020 CREMQ03060 361 aa21.92■■□□□ 1.1
PNKP-211ENST00000598020 DUSP6Q16828 381 aa21.92■■□□□ 1.1
PNKP-211ENST00000598020 CAVIN1Q6NZI2 390 aaKnown RBP21.92■■□□□ 1.1
PNKP-211ENST00000598020 SASS6Q6UVJ0 657 aa21.92■■□□□ 1.1
PNKP-211ENST00000598020 FRMD5Q7Z6J6 570 aa21.92■■□□□ 1.1
PNKP-211ENST00000598020 AUTS2Q8WXX7 1259 aa21.92■■□□□ 1.1
PNKP-211ENST00000598020 TLE6Q9H808 572 aa21.92■■□□□ 1.1
PNKP-211ENST00000598020 METTL14Q9HCE5 456 aaKnown RBP21.92■■□□□ 1.1
PNKP-211ENST00000598020 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.91■■□□□ 1.1
PNKP-211ENST00000598020 ARHGEF37A1IGU5 675 aa21.91■■□□□ 1.1
PNKP-211ENST00000598020 CSPG5O95196 566 aa21.91■■□□□ 1.1
PNKP-211ENST00000598020 FGFR1OPO95684 399 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms