RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 KCNC3Q14003 757 aa14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 OR5B17Q8NGF7 314 aa14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 GOLGA5Q8TBA6 731 aa14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 PLEKHO2Q8TD55 490 aa14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 CCDC127Q96BQ5 260 aa14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 TSPAN18Q96SJ8 248 aa14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 POP1Q99575 1024 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 TTPALQ9BTX7 342 aa14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 MTMR12Q9C0I1 747 aa14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 GZF1Q9H116 711 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 KIAA1586Q9HCI6 787 aa14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 CLEC1BQ9P126 229 aa14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 STK39Q9UEW8 545 aa14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 HCFC2Q9Y5Z7 792 aa14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 ANO9A1A5B4 782 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 TRIM49BA6NDI0 452 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 PIRO00625 290 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 SPTLC1O15269 473 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 ADAM12O43184 909 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 CALUO43852 315 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 ITGB3P05106 788 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 DLATP10515 647 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 POLR2BP30876 1174 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 PMS1P54277 932 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 ELAVL2Q12926 359 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 PSMD5Q16401 504 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 ZCWPW2Q504Y3 356 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 CEP135Q66GS9 1140 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 C1orf127Q8N9H9 656 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 LNX1Q8TBB1 728 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 FEZF2Q8TBJ5 459 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 GPT2Q8TD30 523 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 SLC22A17Q8WUG5 538 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 EEF2KMTQ96G04 330 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 SUSD3Q96L08 255 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 CDCA3Q99618 268 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 APOL5Q9BWW9 433 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 EMILIN2Q9BXX0 1053 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 CLSTN2Q9H4D0 955 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 RXFP1Q9HBX9 757 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 INTS13Q9NVM9 706 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 COG5Q9UP83 839 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 TRAF3IP3Q9Y228 551 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 DOCK6Q96HP0 2047 aa14.91□□□□□ -0.02
SHKBP1-207ENST00000595631 TRAPPC3O43617 180 aa14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 KIF20AO95235 890 aa14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 NR2F2P24468 414 aa14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 KLRC2P26717 231 aa14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 LILRA4P59901 499 aa14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 MORC3Q14149 939 aa14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 PSMD6Q15008 389 aa14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 VARS2Q5ST30 1063 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 RSPO2Q6UXX9 243 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 PALB2Q86YC2 1186 aa14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 NT5DC4Q86YG4 428 aa14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 SLC9A9Q8IVB4 645 aa14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 ADSSL1Q8N142 457 aa14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 CXorf38Q8TB03 319 aa14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 PIK3R5Q8WYR1 880 aa14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 MFSD14AQ96MC6 490 aa14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 SIX4Q9UIU6 781 aa14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 AGAP1Q9UPQ3 857 aa14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 SSX2IPQ9Y2D8 614 aa14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 TIMM13Q9Y5L4 95 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 DENND4AQ7Z401 1863 aa14.9□□□□□ -0.02
SHKBP1-207ENST00000595631 NCK2O43639 380 aa14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 KRT19P08727 400 aa14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 TMEM191BP0C7N4 346 aa14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 SPATA31D3P0C874 917 aa14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 TNNI1P19237 187 aa14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 AARSP49588 968 aaKnown RBP eCLIP14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 CLCN4P51793 760 aa14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 DLG4P78352 724 aa14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 COBLL1Q53SF7 1204 aa14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 KLHL10Q6JEL2 608 aa14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 SPATA31D4Q6ZUB0 917 aa14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 C12orf76Q8N812 135 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 ZNF516Q92618 1163 aa14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 MSLNLQ96KJ4 702 aa14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 CGRRF1Q99675 332 aa14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 CLSTN3Q9BQT9 956 aa14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 KIAA1468Q9P260 1216 aa14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 MTRRQ9UBK8 725 aa14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 CDH22Q9UJ99 828 aa14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 PCDHB8Q9UN66 801 aa14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-207ENST00000595631 LRRIQ3A6PVS8 624 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 PPP1R3GB7ZBB8 358 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 M0QZQ0 153 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 SYN3O14994 580 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 AKAP3O75969 853 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 TNNC2P02585 160 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 ADH1AP07327 375 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 MRPS5P82675 430 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 SURF1Q15526 300 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 NFIL3Q16649 462 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 LEXMQ3ZCV2 418 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 ANKRD40Q6AI12 368 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms