RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 SUSD3Q96L08 255 aa23.75■■□□□ 1.39
HOMER3-206ENST00000594439 IPO9Q96P70 1041 aaKnown RBP23.75■■□□□ 1.39
HOMER3-206ENST00000594439 KCTD10Q9H3F6 313 aa23.75■■□□□ 1.39
HOMER3-206ENST00000594439 KIAA1586Q9HCI6 787 aa23.75■■□□□ 1.39
HOMER3-206ENST00000594439 ZNF233A6NK53 670 aa23.74■■□□□ 1.39
HOMER3-206ENST00000594439 IL9P15248 144 aa23.74■■□□□ 1.39
HOMER3-206ENST00000594439 MCM4P33991 863 aa23.74■■□□□ 1.39
HOMER3-206ENST00000594439 CYP2J2P51589 502 aa23.74■■□□□ 1.39
HOMER3-206ENST00000594439 C9orf57Q5W0N0 161 aa23.74■■□□□ 1.39
HOMER3-206ENST00000594439 PDE11AQ9HCR9 933 aa23.74■■□□□ 1.39
HOMER3-206ENST00000594439 MTCL1Q9Y4B5 1905 aaKnown RBP23.74■■□□□ 1.39
HOMER3-206ENST00000594439 SCN1AP35498 2009 aa23.74■■□□□ 1.39
HOMER3-206ENST00000594439 ANO9A1A5B4 782 aa23.73■■□□□ 1.39
HOMER3-206ENST00000594439 PIRO00625 290 aa23.73■■□□□ 1.39
HOMER3-206ENST00000594439 AARSP49588 968 aaKnown RBP eCLIP23.73■■□□□ 1.39
HOMER3-206ENST00000594439 PDXDC1Q6P996 788 aa23.73■■□□□ 1.39
HOMER3-206ENST00000594439 ELOA2Q8IYF1 753 aaPredicted RBP23.73■■□□□ 1.39
HOMER3-206ENST00000594439 XXYLT1Q8NBI6 393 aa23.73■■□□□ 1.39
HOMER3-206ENST00000594439 SPATA20Q8TB22 786 aa23.73■■□□□ 1.39
HOMER3-206ENST00000594439 GOLGA5Q8TBA6 731 aa23.73■■□□□ 1.39
HOMER3-206ENST00000594439 ADAMTS19Q8TE59 1207 aa23.73■■□□□ 1.39
HOMER3-206ENST00000594439 CLSTN3Q9BQT9 956 aa23.73■■□□□ 1.39
HOMER3-206ENST00000594439 S1PR5Q9H228 398 aa23.73■■□□□ 1.39
HOMER3-206ENST00000594439 DZANK1Q9NVP4 752 aa23.73■■□□□ 1.39
HOMER3-206ENST00000594439 DPP3Q9NY33 737 aa23.73■■□□□ 1.39
HOMER3-206ENST00000594439 MTRRQ9UBK8 725 aa23.73■■□□□ 1.39
HOMER3-206ENST00000594439 PDXKO00764 312 aa23.72■■□□□ 1.39
HOMER3-206ENST00000594439 SYN3O14994 580 aa23.72■■□□□ 1.39
HOMER3-206ENST00000594439 KINO60870 393 aaKnown RBP23.72■■□□□ 1.39
HOMER3-206ENST00000594439 C1RP00736 705 aa23.72■■□□□ 1.39
HOMER3-206ENST00000594439 HOXB8P17481 243 aaPredicted RBP23.72■■□□□ 1.39
HOMER3-206ENST00000594439 UBE2HP62256 183 aa23.72■■□□□ 1.39
HOMER3-206ENST00000594439 GLYCTKQ8IVS8 523 aa23.72■■□□□ 1.39
HOMER3-206ENST00000594439 ERCC4Q92889 916 aaPredicted RBP23.72■■□□□ 1.39
HOMER3-206ENST00000594439 COL25A1Q9BXS0 654 aaPredicted RBP23.72■■□□□ 1.39
HOMER3-206ENST00000594439 DMAC2Q9NW81 257 aa23.72■■□□□ 1.39
HOMER3-206ENST00000594439 PCDHB8Q9UN66 801 aa23.72■■□□□ 1.39
HOMER3-206ENST00000594439 PCDHA5Q9Y5H7 936 aa23.72■■□□□ 1.39
HOMER3-206ENST00000594439 M0QZQ0 153 aa23.71■■□□□ 1.39
HOMER3-206ENST00000594439 ADAM12O43184 909 aa23.71■■□□□ 1.39
HOMER3-206ENST00000594439 KIF20AO95235 890 aa23.71■■□□□ 1.39
HOMER3-206ENST00000594439 GLUD1P00367 558 aa23.71■■□□□ 1.39
HOMER3-206ENST00000594439 TFAMQ00059 246 aaKnown RBP23.71■■□□□ 1.39
HOMER3-206ENST00000594439 SMAD2Q15796 467 aaKnown RBP23.71■■□□□ 1.39
HOMER3-206ENST00000594439 SNRNP35Q16560 246 aaKnown RBP23.71■■□□□ 1.39
HOMER3-206ENST00000594439 VARS2Q5ST30 1063 aaKnown RBP23.71■■□□□ 1.39
HOMER3-206ENST00000594439 LILRA6Q6PI73 481 aa23.71■■□□□ 1.39
HOMER3-206ENST00000594439 RSPO2Q6UXX9 243 aaPredicted RBP23.71■■□□□ 1.39
HOMER3-206ENST00000594439 CLEC17AQ6ZS10 378 aa23.71■■□□□ 1.39
HOMER3-206ENST00000594439 ANKS3Q6ZW76 656 aa23.71■■□□□ 1.39
HOMER3-206ENST00000594439 PALB2Q86YC2 1186 aa23.71■■□□□ 1.39
HOMER3-206ENST00000594439 GUF1Q8N442 669 aaKnown RBP23.71■■□□□ 1.39
HOMER3-206ENST00000594439 RDH13Q8NBN7 331 aa23.71■■□□□ 1.39
HOMER3-206ENST00000594439 TMEM174Q8WUU8 243 aa23.71■■□□□ 1.39
HOMER3-206ENST00000594439 FAM84AQ96KN4 292 aa23.71■■□□□ 1.39
HOMER3-206ENST00000594439 GSDMAQ96QA5 445 aa23.71■■□□□ 1.39
HOMER3-206ENST00000594439 FAM50BQ9Y247 325 aa23.71■■□□□ 1.39
HOMER3-206ENST00000594439 USP15Q9Y4E8 981 aaPredicted RBP23.71■■□□□ 1.39
HOMER3-206ENST00000594439 BACE2Q9Y5Z0 518 aa23.71■■□□□ 1.39
HOMER3-206ENST00000594439 SPTLC1O15269 473 aa23.7■■□□□ 1.38
HOMER3-206ENST00000594439 PRPF40AO75400 957 aaKnown RBP23.7■■□□□ 1.38
HOMER3-206ENST00000594439 SMC2O95347 1197 aa23.7■■□□□ 1.38
HOMER3-206ENST00000594439 LILRA4P59901 499 aa23.7■■□□□ 1.38
HOMER3-206ENST00000594439 MRPL58Q14197 206 aaKnown RBP23.7■■□□□ 1.38
HOMER3-206ENST00000594439 SURF1Q15526 300 aa23.7■■□□□ 1.38
HOMER3-206ENST00000594439 SLC9A9Q8IVB4 645 aa23.7■■□□□ 1.38
HOMER3-206ENST00000594439 C12orf76Q8N812 135 aaPredicted RBP23.7■■□□□ 1.38
HOMER3-206ENST00000594439 CACTINQ8WUQ7 758 aaKnown RBP23.7■■□□□ 1.38
HOMER3-206ENST00000594439 APOL5Q9BWW9 433 aa23.7■■□□□ 1.38
HOMER3-206ENST00000594439 RMND1Q9NWS8 449 aa23.7■■□□□ 1.38
HOMER3-206ENST00000594439 HOOK1Q9UJC3 728 aaKnown RBP23.7■■□□□ 1.38
HOMER3-206ENST00000594439 MAPK8IP1Q9UQF2 711 aa23.7■■□□□ 1.38
HOMER3-206ENST00000594439 TRAF3IP3Q9Y228 551 aa23.7■■□□□ 1.38
HOMER3-206ENST00000594439 PTPRJQ12913 1337 aa23.69■■□□□ 1.38
HOMER3-206ENST00000594439 TULP1O00294 542 aaPredicted RBP23.69■■□□□ 1.38
HOMER3-206ENST00000594439 TGM5O43548 720 aa23.69■■□□□ 1.38
HOMER3-206ENST00000594439 PAX3P23760 479 aa23.69■■□□□ 1.38
HOMER3-206ENST00000594439 CYP24A1Q07973 514 aa23.69■■□□□ 1.38
HOMER3-206ENST00000594439 PSMD6Q15008 389 aa23.69■■□□□ 1.38
HOMER3-206ENST00000594439 SMYD4Q8IYR2 804 aaPredicted RBP23.69■■□□□ 1.38
HOMER3-206ENST00000594439 C1orf127Q8N9H9 656 aa23.69■■□□□ 1.38
HOMER3-206ENST00000594439 CXorf38Q8TB03 319 aa23.69■■□□□ 1.38
HOMER3-206ENST00000594439 SUSD6Q92537 303 aa23.69■■□□□ 1.38
HOMER3-206ENST00000594439 SMARCE1Q969G3 411 aa23.69■■□□□ 1.38
HOMER3-206ENST00000594439 NECAB3Q96P71 396 aaPredicted RBP23.69■■□□□ 1.38
HOMER3-206ENST00000594439 MAN1C1Q9NR34 630 aa23.69■■□□□ 1.38
HOMER3-206ENST00000594439 INTS13Q9NVM9 706 aa23.69■■□□□ 1.38
HOMER3-206ENST00000594439 TBC1D4O60343 1298 aa23.68■■□□□ 1.38
HOMER3-206ENST00000594439 EXOC3O60645 756 aa23.68■■□□□ 1.38
HOMER3-206ENST00000594439 NR3C1P04150 777 aa23.68■■□□□ 1.38
HOMER3-206ENST00000594439 SPATA31D3P0C874 917 aa23.68■■□□□ 1.38
HOMER3-206ENST00000594439 OR1D2P34982 312 aa23.68■■□□□ 1.38
HOMER3-206ENST00000594439 RAB33AQ14088 237 aa23.68■■□□□ 1.38
HOMER3-206ENST00000594439 RARS2Q5T160 578 aaKnown RBP23.68■■□□□ 1.38
HOMER3-206ENST00000594439 LMBRD2Q68DH5 695 aaPredicted RBP23.68■■□□□ 1.38
HOMER3-206ENST00000594439 DSTYKQ6XUX3 929 aa23.68■■□□□ 1.38
HOMER3-206ENST00000594439 SPATA31D4Q6ZUB0 917 aa23.68■■□□□ 1.38
HOMER3-206ENST00000594439 APPL2Q8NEU8 664 aa23.68■■□□□ 1.38
HOMER3-206ENST00000594439 OR5B17Q8NGF7 314 aa23.68■■□□□ 1.38
HOMER3-206ENST00000594439 HDAC7Q8WUI4 952 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms