RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 PCDH8O95206 1070 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 ZNF394Q53GI3 561 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 TREML2Q5T2D2 321 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 DARS2Q6PI48 645 aaKnown RBP12.09□□□□□ -0.47
SEH1L-208ENST00000590843 PALB2Q86YC2 1186 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 C12orf42Q96LP6 360 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 USP18Q9UMW8 372 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 AP1G2O75843 785 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 ATXN8OSP0DMR3 200 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 MYBL2P10244 700 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 POLR2EP19388 210 aaKnown RBP12.09□□□□□ -0.47
SEH1L-208ENST00000590843 CHKAP35790 457 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 SULT1E1P49888 294 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 SKP1P63208 163 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 TAF11Q15544 211 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 C8orf34Q49A92 452 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 THEMIS2Q5TEJ8 643 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 FLCNQ8NFG4 579 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 OMDQ99983 421 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 CORO1BQ9BR76 489 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 DRC3Q9H069 523 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 THAP9Q9H5L6 903 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 NKIRAS1Q9NYS0 192 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 HDAC6Q9UBN7 1215 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 ITGA11Q9UKX5 1188 aa12.09□□□□□ -0.47
SEH1L-208ENST00000590843 ARHGAP42A6NI28 874 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 USP17L7P0C7H9 530 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 CDO1Q16878 200 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 UBXN6Q9BZV1 441 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 RASSF10A6NK89 507 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 YDJCA8MPS7 323 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 PDXKO00764 312 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 ZNF284Q2VY69 593 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 PLA2G4FQ68DD2 849 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 KLC3Q6P597 504 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 PRR23BQ6ZRT6 265 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.08□□□□□ -0.48
SEH1L-208ENST00000590843 GET4Q7L5D6 327 aaPredicted RBP12.08□□□□□ -0.48
SEH1L-208ENST00000590843 BAG1Q99933 345 aaPredicted RBP12.08□□□□□ -0.48
SEH1L-208ENST00000590843 ASB7Q9H672 318 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 SPACA6W5XKT8 324 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 CICQ96RK0 1608 aaPredicted RBP12.08□□□□□ -0.48
SEH1L-208ENST00000590843 FAM47DPA6NHR8 397 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 MMP3P08254 477 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 PDGFRBP09619 1106 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 YWHAQP27348 245 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 MAP4P27816 1152 aaKnown RBP12.08□□□□□ -0.48
SEH1L-208ENST00000590843 AKT1P31749 480 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 GTF2F1P35269 517 aaKnown RBP eCLIP12.08□□□□□ -0.48
SEH1L-208ENST00000590843 ZNF445P59923 1031 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 LAMTOR4Q0VGL1 99 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 COASYQ13057 564 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 CYB5D1Q6P9G0 228 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 DCLRE1AQ6PJP8 1040 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 CTAGE3PQ8IX95 158 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 IFT81Q8WYA0 676 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 RBM41Q96IZ5 413 aaKnown RBP12.08□□□□□ -0.48
SEH1L-208ENST00000590843 USP28Q96RU2 1077 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 TUBGCP2Q9BSJ2 902 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 PLCB1Q9NQ66 1216 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 MAN1C1Q9NR34 630 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 RRN3Q9NYV6 651 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 PRR23AA6NEV1 266 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 CASTOR2A6NHX0 329 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 NOP14P78316 857 aaKnown RBP12.08□□□□□ -0.48
SEH1L-208ENST00000590843 TSHZ1Q6ZSZ6 1077 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 FRA10AC1Q70Z53 315 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 IL23AQ9NPF7 189 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 HPS5Q9UPZ3 1129 aa12.08□□□□□ -0.48
SEH1L-208ENST00000590843 SLC16A3O15427 465 aaKnown RBP12.07□□□□□ -0.48
SEH1L-208ENST00000590843 CREB3O43889 395 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 CEP104O60308 925 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 PSEN1P49768 467 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 NECTIN1Q15223 517 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 FBXO47Q5MNV8 452 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 MICALCLQ6ZW33 695 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 METTL3Q86U44 580 aaKnown RBP12.07□□□□□ -0.48
SEH1L-208ENST00000590843 MYLK4Q86YV6 388 aaPredicted RBP12.07□□□□□ -0.48
SEH1L-208ENST00000590843 SAAL1Q96ER3 474 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 SCYL1Q96KG9 808 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 NIF3L1Q9GZT8 377 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 SUDS3Q9H7L9 328 aaPredicted RBP12.07□□□□□ -0.48
SEH1L-208ENST00000590843 DNAJC6O75061 913 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 SLC30A10Q6XR72 485 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 KCPQ6ZWJ8 1503 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 CCDC13Q8IYE1 715 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 DAGLBQ8NCG7 672 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 MIR1-1HGQ9H1L0 117 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 AASDHPPTQ9NRN7 309 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 FZD1Q9UP38 647 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 LRRN2O75325 713 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 PPP6R3Q5H9R7 873 aaPredicted RBP12.07□□□□□ -0.48
SEH1L-208ENST00000590843 FAM102AQ5T9C2 384 aaPredicted RBP12.07□□□□□ -0.48
SEH1L-208ENST00000590843 CHRDL2Q6WN34 429 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 ELOA2Q8IYF1 753 aaPredicted RBP12.07□□□□□ -0.48
SEH1L-208ENST00000590843 RAD9AQ99638 391 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 PAIP2Q9BPZ3 127 aaKnown RBP12.07□□□□□ -0.48
SEH1L-208ENST00000590843 C10orf71Q711Q0 1435 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 BRD1O95696 1058 aa12.07□□□□□ -0.48
SEH1L-208ENST00000590843 GCLMP48507 274 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms