RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 MYL6P60660 151 aa16.32■□□□□ 0.2
DDX39A-211ENST00000590239 SOX4Q06945 474 aaPredicted RBP16.32■□□□□ 0.2
DDX39A-211ENST00000590239 TUSC3Q13454 348 aa16.32■□□□□ 0.2
DDX39A-211ENST00000590239 C9orf57Q5W0N0 161 aa16.32■□□□□ 0.2
DDX39A-211ENST00000590239 OTOP2Q7RTS6 562 aa16.32■□□□□ 0.2
DDX39A-211ENST00000590239 HERVK_113Q902F9 699 aa16.32■□□□□ 0.2
DDX39A-211ENST00000590239 DDX27Q96GQ7 796 aaKnown RBP16.32■□□□□ 0.2
DDX39A-211ENST00000590239 UROC1Q96N76 676 aa16.32■□□□□ 0.2
DDX39A-211ENST00000590239 CASD1Q96PB1 797 aa16.32■□□□□ 0.2
DDX39A-211ENST00000590239 PPP1R9BQ96SB3 815 aa16.32■□□□□ 0.2
DDX39A-211ENST00000590239 MRPL9Q9BYD2 267 aaKnown RBP16.32■□□□□ 0.2
DDX39A-211ENST00000590239 TTYH3Q9C0H2 523 aa16.32■□□□□ 0.2
DDX39A-211ENST00000590239 XYLT2Q9H1B5 865 aa16.32■□□□□ 0.2
DDX39A-211ENST00000590239 VRTNQ9H8Y1 702 aa16.32■□□□□ 0.2
DDX39A-211ENST00000590239 CEP72Q9P209 647 aa16.32■□□□□ 0.2
DDX39A-211ENST00000590239 CAPN11Q9UMQ6 739 aa16.32■□□□□ 0.2
DDX39A-211ENST00000590239 AGAP1Q9UPQ3 857 aa16.32■□□□□ 0.2
DDX39A-211ENST00000590239 PIRO00625 290 aa16.31■□□□□ 0.2
DDX39A-211ENST00000590239 DGKIO75912 1065 aa16.31■□□□□ 0.2
DDX39A-211ENST00000590239 GYPCP04921 128 aa16.31■□□□□ 0.2
DDX39A-211ENST00000590239 UCHL3P15374 230 aa16.31■□□□□ 0.2
DDX39A-211ENST00000590239 PAX3P23760 479 aa16.31■□□□□ 0.2
DDX39A-211ENST00000590239 PNPLA4P41247 253 aa16.31■□□□□ 0.2
DDX39A-211ENST00000590239 NOP14P78316 857 aaKnown RBP16.31■□□□□ 0.2
DDX39A-211ENST00000590239 MYO1EQ12965 1108 aa16.31■□□□□ 0.2
DDX39A-211ENST00000590239 ZNF699Q32M78 642 aa16.31■□□□□ 0.2
DDX39A-211ENST00000590239 SMYD5Q6GMV2 418 aa16.31■□□□□ 0.2
DDX39A-211ENST00000590239 PHLDB3Q6NSJ2 640 aa16.31■□□□□ 0.2
DDX39A-211ENST00000590239 ENOSF1Q7L5Y1 443 aa16.31■□□□□ 0.2
DDX39A-211ENST00000590239 SPC24Q8NBT2 197 aa16.31■□□□□ 0.2
DDX39A-211ENST00000590239 HPDLQ96IR7 371 aa16.31■□□□□ 0.2
DDX39A-211ENST00000590239 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.31■□□□□ 0.23e-12■□□□□ 11.1
DDX39A-211ENST00000590239 PI4K2AQ9BTU6 479 aa16.31■□□□□ 0.2
DDX39A-211ENST00000590239 MTIF3Q9H2K0 278 aaKnown RBP16.31■□□□□ 0.2
DDX39A-211ENST00000590239 TBC1D13Q9NVG8 400 aa16.31■□□□□ 0.2
DDX39A-211ENST00000590239 EPHB6O15197 1021 aa16.3■□□□□ 0.2
DDX39A-211ENST00000590239 LRRN2O75325 713 aa16.3■□□□□ 0.2
DDX39A-211ENST00000590239 DEFB103AP81534 67 aa16.3■□□□□ 0.2
DDX39A-211ENST00000590239 APBA1Q02410 837 aa16.3■□□□□ 0.2
DDX39A-211ENST00000590239 GCNT1Q02742 428 aa16.3■□□□□ 0.2
DDX39A-211ENST00000590239 RNASELQ05823 741 aaKnown RBP16.3■□□□□ 0.2
DDX39A-211ENST00000590239 DSC1Q08554 894 aa16.3■□□□□ 0.2
DDX39A-211ENST00000590239 SCARA3Q6AZY7 606 aa16.3■□□□□ 0.2
DDX39A-211ENST00000590239 ZNF397Q8NF99 534 aaPredicted RBP16.3■□□□□ 0.2
DDX39A-211ENST00000590239 JAKMIP2Q96AA8 810 aa16.3■□□□□ 0.2
DDX39A-211ENST00000590239 ZNF560Q96MR9 790 aa16.3■□□□□ 0.2
DDX39A-211ENST00000590239 NAA15Q9BXJ9 866 aaKnown RBP16.3■□□□□ 0.2
DDX39A-211ENST00000590239 MYO6Q9UM54 1294 aa16.3■□□□□ 0.2
DDX39A-211ENST00000590239 LUC7L2Q9Y383 392 aaKnown RBP16.3■□□□□ 0.2
DDX39A-211ENST00000590239 SZT2Q5T011 3432 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 TBKBP1A7MCY6 615 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 ZBBXA8MT70 800 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 UPP2O95045 317 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 P4HA1P13674 534 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 TBXAS1P24557 533 aaPredicted RBP16.29■□□□□ 0.2
DDX39A-211ENST00000590239 GATMP50440 423 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 MFAP3P55082 362 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 GSDMDP57764 484 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 POLR2FP61218 127 aaKnown RBP16.29■□□□□ 0.2
DDX39A-211ENST00000590239 ZBED6P86452 979 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 LRMPQ12912 555 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 UPP1Q16831 310 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 SV2CQ496J9 727 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 ZNF667Q5HYK9 610 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 IQCEQ6IPM2 695 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 CACNA2D4Q7Z3S7 1137 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 CNGA4Q8IV77 575 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 ARHGEF19Q8IW93 802 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 LRRC43Q8N309 656 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 PHOSPHO2Q8TCD6 241 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 TATDN2Q93075 761 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 FAM193BQ96PV7 902 aaPredicted RBP16.29■□□□□ 0.2
DDX39A-211ENST00000590239 STK33Q9BYT3 514 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 NIF3L1Q9GZT8 377 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 NUCKS1Q9H1E3 243 aaKnown RBP16.29■□□□□ 0.2
DDX39A-211ENST00000590239 GOLGA2P5Q9HBQ8 144 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 APOBEC3GQ9HC16 384 aaKnown RBP16.29■□□□□ 0.2
DDX39A-211ENST00000590239 UBE2TQ9NPD8 197 aaPredicted RBP16.29■□□□□ 0.2
DDX39A-211ENST00000590239 DNAJC12Q9UKB3 198 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 NUB1Q9Y5A7 615 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 FHOD1Q9Y613 1164 aa16.29■□□□□ 0.2
DDX39A-211ENST00000590239 AKR1B15C9JRZ8 316 aaPredicted RBP16.28■□□□□ 0.2
DDX39A-211ENST00000590239 PODXLO00592 558 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 PPEF2O14830 753 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 MFAP3LO75121 409 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 DDHD2O94830 711 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 CASP14P31944 242 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 TAF6P49848 677 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 FXR1P51114 621 aaKnown RBP eCLIP16.28■□□□□ 0.2
DDX39A-211ENST00000590239 CUL2Q13617 745 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 RASIP1Q5U651 963 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 SPOPLQ6IQ16 392 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 GJB7Q6PEY0 223 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 DCLRE1AQ6PJP8 1040 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 ZNF280BQ86YH2 543 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 COLGALT2Q8IYK4 626 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 CMTR2Q8IYT2 770 aaKnown RBP16.28■□□□□ 0.2
DDX39A-211ENST00000590239 TMEM130Q8N3G9 435 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 PPM1KQ8N3J5 372 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 CPLX3Q8WVH0 158 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms