RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 LOC102724159A0A0B4J2E5 919 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 SHISA3A0PJX4 238 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 HIDE1A8MVS5 230 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 CLEC3AO75596 197 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 DCNP07585 359 aaKnown RBP8.98□□□□□ -0.97
SMAD4-209ENST00000589941 GNAI3P08754 354 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 SRFP11831 508 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 NCLP19338 710 aaKnown RBP8.98□□□□□ -0.97
SMAD4-209ENST00000589941 CASTP20810 708 aaKnown RBP8.98□□□□□ -0.97
SMAD4-209ENST00000589941 FUT4P22083 530 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 GUCY2CP25092 1073 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 RPS6P62753 249 aaKnown RBP8.98□□□□□ -0.97
SMAD4-209ENST00000589941 IKZF1Q13422 519 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 PWP2Q15269 919 aaKnown RBP8.98□□□□□ -0.97
SMAD4-209ENST00000589941 DGKDQ16760 1214 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 TMED8Q6PL24 325 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-209ENST00000589941 TMEM184AQ6ZMB5 413 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 FAM160B2Q86V87 743 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 FRAT1Q92837 279 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-209ENST00000589941 ATP6V0A1Q93050 837 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 DNAJC2Q99543 621 aaKnown RBP8.98□□□□□ -0.97
SMAD4-209ENST00000589941 GPR62Q9BZJ7 368 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 RANBP17Q9H2T7 1088 aaKnown RBP8.98□□□□□ -0.97
SMAD4-209ENST00000589941 PRDM7Q9NQW5 492 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 DLGAP2Q9P1A6 1054 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 ADAMTS6Q9UKP5 1117 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 KCNH3Q9ULD8 1083 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 SLC4A4Q9Y6R1 1079 aa8.98□□□□□ -0.97
SMAD4-209ENST00000589941 TICRRQ7Z2Z1 1910 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 TTLL1O95922 423 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 GLULP15104 373 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 PMLP29590 882 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 ADD2P35612 726 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 SLC16A2P36021 539 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 SLC1A4P43007 532 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 SNW1Q13573 536 aaKnown RBP8.97□□□□□ -0.97
SMAD4-209ENST00000589941 LPIN1Q14693 890 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 PLCL1Q15111 1095 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 ALDH1L2Q3SY69 923 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 ZC3H14Q6PJT7 736 aaKnown RBP8.97□□□□□ -0.97
SMAD4-209ENST00000589941 UNC5AQ6ZN44 842 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 RNF207Q6ZRF8 634 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 THAP5Q7Z6K1 395 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 CMTR2Q8IYT2 770 aaKnown RBP8.97□□□□□ -0.97
SMAD4-209ENST00000589941 ZDHHC14Q8IZN3 488 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 C12orf76Q8N812 135 aaPredicted RBP8.97□□□□□ -0.97
SMAD4-209ENST00000589941 FAM169BQ8N8A8 192 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 AGBL5Q8NDL9 886 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 MICAL1Q8TDZ2 1067 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 APBB2Q92870 758 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 KATNAL1Q9BW62 490 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 COL20A1Q9P218 1284 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 ADGRE2Q9UHX3 823 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 ANGPTL2Q9UKU9 493 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 USP18Q9UMW8 372 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 DUSP12Q9UNI6 340 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 HDAC5Q9UQL6 1122 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.97□□□□□ -0.97
SMAD4-209ENST00000589941 GREB1Q4ZG55 1949 aa8.97□□□□□ -0.97
SMAD4-209ENST00000589941 ADAMTS20P59510 1910 aa8.96□□□□□ -0.97
SMAD4-209ENST00000589941 C17orf102A2RUQ5 167 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 C9IYK1 514 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 ENPP3O14638 875 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 KINO60870 393 aaKnown RBP8.96□□□□□ -0.98
SMAD4-209ENST00000589941 SURF6O75683 361 aaKnown RBP8.96□□□□□ -0.98
SMAD4-209ENST00000589941 CHRNA1P02708 482 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 GNAI2P04899 355 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 C1QTNF9P0C862 333 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 SMIM10L2AP0DMW4 78 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 SMIM10L2BP0DMW5 78 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 RNF4P78317 190 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 BECN1Q14457 450 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 NAALADL2Q58DX5 795 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 AACSQ86V21 672 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 AMOTL1Q8IY63 956 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 SSH3Q8TE77 659 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 CHURC1Q8WUH1 139 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 CDCA3Q99618 268 aaPredicted RBP8.96□□□□□ -0.98
SMAD4-209ENST00000589941 C16orf70Q9BSU1 422 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 API5Q9BZZ5 524 aaKnown RBP8.96□□□□□ -0.98
SMAD4-209ENST00000589941 TBC1D17Q9HA65 648 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 CARS2Q9HA77 564 aaKnown RBP8.96□□□□□ -0.98
SMAD4-209ENST00000589941 EPB41L4AQ9HCS5 686 aaPredicted RBP8.96□□□□□ -0.98
SMAD4-209ENST00000589941 ARPP21Q9UBL0 812 aaPredicted RBP8.96□□□□□ -0.98
SMAD4-209ENST00000589941 FBXL21Q9UKT6 434 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 CA14Q9ULX7 337 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 SMG5Q9UPR3 1016 aaKnown RBP8.96□□□□□ -0.98
SMAD4-209ENST00000589941 LAMA5O15230 3695 aa8.96□□□□□ -0.98
SMAD4-209ENST00000589941 PRR5-ARHGAP8B1AHC4 643 aa8.95□□□□□ -0.98
SMAD4-209ENST00000589941 NMT2O60551 498 aa8.95□□□□□ -0.98
SMAD4-209ENST00000589941 ESR1P03372 595 aa8.95□□□□□ -0.98
SMAD4-209ENST00000589941 PROS1P07225 676 aa8.95□□□□□ -0.98
SMAD4-209ENST00000589941 SDHBP21912 280 aa8.95□□□□□ -0.98
SMAD4-209ENST00000589941 TPP2P29144 1249 aaPredicted RBP8.95□□□□□ -0.98
SMAD4-209ENST00000589941 ARHGAP8P85298 464 aa8.95□□□□□ -0.98
SMAD4-209ENST00000589941 GAB4Q2WGN9 574 aa8.95□□□□□ -0.98
SMAD4-209ENST00000589941 HSDL1Q3SXM5 330 aa8.95□□□□□ -0.98
SMAD4-209ENST00000589941 RARS2Q5T160 578 aaKnown RBP8.95□□□□□ -0.98
SMAD4-209ENST00000589941 TDRD10Q5VZ19 366 aaKnown RBP8.95□□□□□ -0.98
SMAD4-209ENST00000589941 TMC3Q7Z5M5 1100 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms