RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 FANCMQ8IYD8 2048 aa13.81□□□□□ -0.2
RFX1-207ENST00000589937 WDR87Q6ZQQ6 2873 aa13.81□□□□□ -0.2
RFX1-207ENST00000589937 TRAPPC3O43617 180 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 XYLBO75191 536 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 TBCAO75347 108 aaKnown RBP13.8□□□□□ -0.2
RFX1-207ENST00000589937 VNN2O95498 520 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 BMP15O95972 392 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 PIGRP01833 764 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 RHOP08100 348 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 NFICP08651 508 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 CLTAP09496 248 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 OR4Q2P0C623 313 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 SRFP11831 508 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 PPP2R3AQ06190 1150 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 CTXN3Q4LDR2 81 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 PABPC1LQ4VXU2 614 aaKnown RBP13.8□□□□□ -0.2
RFX1-207ENST00000589937 JADE1Q6IE81 842 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 ZSWIM2Q8NEG5 633 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 DDX12PQ92771 950 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 TCEAL4Q96EI5 215 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 FAM212AQ96EL1 285 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 USP28Q96RU2 1077 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 FGFBP2Q9BYJ0 223 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 TBC1D17Q9HA65 648 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.8□□□□□ -0.25e-8■□□□□ 9.3
RFX1-207ENST00000589937 CACNA1IQ9P0X4 2223 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 NUP210Q8TEM1 1887 aaPredicted RBP13.8□□□□□ -0.2
RFX1-207ENST00000589937 DENND4CQ5VZ89 1909 aa13.8□□□□□ -0.2
RFX1-207ENST00000589937 A0A0B4J269 797 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 MYMKA6NI61 221 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 PRRG1O14668 218 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 SYN3O14994 580 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 OGTO15294 1046 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 SLC26A4O43511 780 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 TRAK2O60296 914 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 ABLIM3O94929 683 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 AOC1P19801 751 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 RPL9P32969 192 aaKnown RBP13.79□□□□□ -0.2
RFX1-207ENST00000589937 CCR2P41597 374 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 KCNA1Q09470 495 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 MRPL58Q14197 206 aaKnown RBP13.79□□□□□ -0.2
RFX1-207ENST00000589937 ZBTB6Q15916 424 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 MAP4K3Q8IVH8 894 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 KCTD17Q8N5Z5 321 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 ATOH1Q92858 354 aaPredicted RBP13.79□□□□□ -0.2
RFX1-207ENST00000589937 MSTO1Q9BUK6 570 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 FOXQ1Q9C009 403 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 CCSER1Q9C0I3 900 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 CRISPLD1Q9H336 500 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 CYP4F11Q9HBI6 524 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 TBC1D7Q9P0N9 293 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 PCDHB8Q9UN66 801 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 INSL5Q9Y5Q6 135 aa13.79□□□□□ -0.2
RFX1-207ENST00000589937 ARHGEF37A1IGU5 675 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 SPTLC1O15269 473 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 LRRN2O75325 713 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 LRPAP1P30533 357 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 ACOT2P49753 483 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 CLCN5P51795 746 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 CASP5P51878 434 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 WNT7BP56706 349 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 GPC5P78333 572 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 FOXD4L5Q5VV16 416 aaPredicted RBP13.78□□□□□ -0.2
RFX1-207ENST00000589937 ZNF280DQ6N043 979 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 RNF19BQ6ZMZ0 732 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 HS6ST3Q8IZP7 471 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 TTC9BQ8N6N2 239 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 FOXD4L4Q8WXT5 416 aaPredicted RBP13.78□□□□□ -0.2
RFX1-207ENST00000589937 KCNN1Q92952 543 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 PGLYRP2Q96PD5 576 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 TMEM209Q96SK2 561 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 PRRX2Q99811 253 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 CORO1BQ9BR76 489 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 PLA2G2FQ9BZM2 168 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 ARHGEF3Q9NR81 526 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 CPSF3Q9UKF6 684 aaKnown RBP13.78□□□□□ -0.2
RFX1-207ENST00000589937 NCANO14594 1321 aa13.78□□□□□ -0.2
RFX1-207ENST00000589937 H0YCG3 227 aa13.77□□□□□ -0.21
RFX1-207ENST00000589937 K7ELQ4 463 aaPredicted RBP13.77□□□□□ -0.21
RFX1-207ENST00000589937 M0QZQ0 153 aa13.77□□□□□ -0.21
RFX1-207ENST00000589937 STK25O00506 426 aa13.77□□□□□ -0.21
RFX1-207ENST00000589937 PPP1R37O75864 691 aa13.77□□□□□ -0.21
RFX1-207ENST00000589937 SOAT2O75908 522 aa13.77□□□□□ -0.21
RFX1-207ENST00000589937 FRYLO94915 3013 aa13.77□□□□□ -0.21
RFX1-207ENST00000589937 DCNP07585 359 aaKnown RBP13.77□□□□□ -0.21
RFX1-207ENST00000589937 POU2F2P09086 479 aa13.77□□□□□ -0.21
RFX1-207ENST00000589937 CPB1P15086 417 aa13.77□□□□□ -0.21
RFX1-207ENST00000589937 GJA1P17302 382 aa13.77□□□□□ -0.21
RFX1-207ENST00000589937 PDCP20941 246 aa13.77□□□□□ -0.21
RFX1-207ENST00000589937 AARSP49588 968 aaKnown RBP eCLIP13.77□□□□□ -0.21
RFX1-207ENST00000589937 GTF2BQ00403 316 aa13.77□□□□□ -0.21
RFX1-207ENST00000589937 ADCY1Q08828 1119 aa13.77□□□□□ -0.21
RFX1-207ENST00000589937 ZNF638Q14966 1978 aaKnown RBP13.77□□□□□ -0.21
RFX1-207ENST00000589937 PRSS36Q5K4E3 855 aa13.77□□□□□ -0.21
RFX1-207ENST00000589937 SCARA3Q6AZY7 606 aa13.77□□□□□ -0.21
RFX1-207ENST00000589937 CCDC105Q8IYK2 499 aa13.77□□□□□ -0.21
RFX1-207ENST00000589937 TCEAL8Q8IYN2 117 aa13.77□□□□□ -0.21
RFX1-207ENST00000589937 ZNF461Q8TAF7 563 aa13.77□□□□□ -0.21
RFX1-207ENST00000589937 DNAJC19Q96DA6 116 aa13.77□□□□□ -0.21
RFX1-207ENST00000589937 MCRS1Q96EZ8 462 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms