RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 KCTD10Q9H3F6 313 aa19.02■□□□□ 0.64
DNMT1-215ENST00000588913 TMEM206Q9H813 350 aa19.02■□□□□ 0.64
DNMT1-215ENST00000588913 IFNKQ9P0W0 207 aa19.02■□□□□ 0.64
DNMT1-215ENST00000588913 PCDHA5Q9Y5H7 936 aa19.02■□□□□ 0.64
DNMT1-215ENST00000588913 A0A0C4DFX4 3053 aa19.02■□□□□ 0.64
DNMT1-215ENST00000588913 PLXNA3P51805 1871 aa19.02■□□□□ 0.63
DNMT1-215ENST00000588913 TPM1P09493 284 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 GARTP22102 1010 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 TFF2Q03403 129 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 UPP1Q16831 310 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 TIGD5Q53EQ6 642 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 CT47A1Q5JQC4 288 aaPredicted RBP19.01■□□□□ 0.63
DNMT1-215ENST00000588913 TMC6Q7Z403 805 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 CBWD2Q8IUF1 395 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 SPATA20Q8TB22 786 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 FEZF2Q8TBJ5 459 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 RPF1Q9H9Y2 349 aaKnown RBP19.01■□□□□ 0.63
DNMT1-215ENST00000588913 ENTPD7Q9NQZ7 604 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 UBE4BO95155 1302 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 PTPRJQ12913 1337 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 C2orf71A6NGG8 1288 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 LILRB3O75022 631 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 GLP2RO95838 553 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 LTBRP36941 435 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 BRCC3P46736 316 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 NRIP1P48552 1158 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 KRT17Q04695 432 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 ARMCX5Q6P1M9 558 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 FUT10Q6P4F1 479 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 TMC7Q7Z402 723 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 MICAL1Q8TDZ2 1067 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 KIF12Q96FN5 646 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 IGFLR1Q9H665 355 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 HSPBP1Q9NZL4 362 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 ADAM28Q9UKQ2 775 aa19.01■□□□□ 0.63
DNMT1-215ENST00000588913 SCN1AP35498 2009 aa19■□□□□ 0.63
DNMT1-215ENST00000588913 ZSCAN12O43309 604 aa19■□□□□ 0.63
DNMT1-215ENST00000588913 FANCCQ00597 558 aa19■□□□□ 0.63
DNMT1-215ENST00000588913 PPP2R3AQ06190 1150 aa19■□□□□ 0.63
DNMT1-215ENST00000588913 KCNB1Q14721 858 aa19■□□□□ 0.63
DNMT1-215ENST00000588913 COL19A1Q14993 1142 aa19■□□□□ 0.63
DNMT1-215ENST00000588913 NCAPHQ15003 741 aa19■□□□□ 0.63
DNMT1-215ENST00000588913 KNOP1Q1ED39 458 aaKnown RBP19■□□□□ 0.63
DNMT1-215ENST00000588913 ISM2Q6H9L7 571 aa19■□□□□ 0.63
DNMT1-215ENST00000588913 KANK3Q6NY19 840 aa19■□□□□ 0.63
DNMT1-215ENST00000588913 NOC3LQ8WTT2 800 aaKnown RBP19■□□□□ 0.63
DNMT1-215ENST00000588913 ARID3AQ99856 593 aa19■□□□□ 0.63
DNMT1-215ENST00000588913 HERC2P3Q9BVR0 1158 aa19■□□□□ 0.63
DNMT1-215ENST00000588913 PLEKHA5Q9HAU0 1116 aa19■□□□□ 0.63
DNMT1-215ENST00000588913 CTSAP10619 480 aa18.99■□□□□ 0.63
DNMT1-215ENST00000588913 BMP6P22004 513 aa18.99■□□□□ 0.63
DNMT1-215ENST00000588913 CYP2J2P51589 502 aa18.99■□□□□ 0.63
DNMT1-215ENST00000588913 PSMD2Q13200 908 aa18.99■□□□□ 0.63
DNMT1-215ENST00000588913 SKIV2LQ15477 1246 aaKnown RBP18.99■□□□□ 0.63
DNMT1-215ENST00000588913 RTP2Q5QGT7 225 aa18.99■□□□□ 0.63
DNMT1-215ENST00000588913 TAF3Q5VWG9 929 aa18.99■□□□□ 0.63
DNMT1-215ENST00000588913 BRSK2Q8IWQ3 736 aa18.99■□□□□ 0.63
DNMT1-215ENST00000588913 KRT222Q8N1A0 295 aa18.99■□□□□ 0.63
DNMT1-215ENST00000588913 MRPL43Q8N983 215 aaKnown RBP18.99■□□□□ 0.63
DNMT1-215ENST00000588913 COLEC11Q9BWP8 271 aa18.99■□□□□ 0.63
DNMT1-215ENST00000588913 PODXLO00592 558 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 C2CD2LO14523 706 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 EXTL3O43909 919 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 TBX10O75333 385 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 CXCL14O95715 111 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 SOD2P04179 222 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 CTC1Q2NKJ3 1217 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 KIAA0319Q5VV43 1072 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 LMBRD2Q68DH5 695 aaPredicted RBP18.98■□□□□ 0.63
DNMT1-215ENST00000588913 STXBP4Q6ZWJ1 553 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 TRIML1Q8N9V2 468 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 PLEKHO2Q8TD55 490 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 PPP1R13BQ96KQ4 1090 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 FBXL18Q96ME1 805 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 CHST7Q9NS84 486 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 PUF60Q9UHX1 559 aaKnown RBP18.98■□□□□ 0.63
DNMT1-215ENST00000588913 USP27XA6NNY8 438 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 KCNC3Q14003 757 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 ARID5BQ14865 1188 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 DUSP6Q16828 381 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 E4F1Q66K89 784 aaPredicted RBP18.98■□□□□ 0.63
DNMT1-215ENST00000588913 PRSS55Q6UWB4 352 aaPredicted RBP18.98■□□□□ 0.63
DNMT1-215ENST00000588913 GPD1LQ8N335 351 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 RDH13Q8NBN7 331 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 PDE11AQ9HCR9 933 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 MAN1B1Q9UKM7 699 aa18.98■□□□□ 0.63
DNMT1-215ENST00000588913 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.97■□□□□ 0.63
DNMT1-215ENST00000588913 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.97■□□□□ 0.63
DNMT1-215ENST00000588913 TADA2AO75478 443 aa18.97■□□□□ 0.63
DNMT1-215ENST00000588913 B3GAT3O94766 335 aa18.97■□□□□ 0.63
DNMT1-215ENST00000588913 RPL17P18621 184 aaKnown RBP18.97■□□□□ 0.63
DNMT1-215ENST00000588913 UBASH3AP57075 661 aa18.97■□□□□ 0.63
DNMT1-215ENST00000588913 SMC1AQ14683 1233 aaKnown RBP18.97■□□□□ 0.63
DNMT1-215ENST00000588913 SPATA1Q5VX52 437 aa18.97■□□□□ 0.63
DNMT1-215ENST00000588913 TLE6Q9H808 572 aa18.97■□□□□ 0.63
DNMT1-215ENST00000588913 NGRNQ9NPE2 291 aaKnown RBP18.97■□□□□ 0.63
DNMT1-215ENST00000588913 DMAC2Q9NW81 257 aa18.97■□□□□ 0.63
DNMT1-215ENST00000588913 RBAKQ9NYW8 714 aaPredicted RBP18.97■□□□□ 0.63
DNMT1-215ENST00000588913 TSC2P49815 1807 aa18.97■□□□□ 0.63
DNMT1-215ENST00000588913 TMEM189-UBE2V1I3L0A0 370 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms