RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 CYP11B1P15538 503 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 H2AFXP16104 143 aaPredicted RBP9.4□□□□□ -0.9
SMAD4-206ENST00000588860 ZSCAN20P17040 1043 aaPredicted RBP9.4□□□□□ -0.9
SMAD4-206ENST00000588860 TBXAS1P24557 533 aaPredicted RBP9.4□□□□□ -0.9
SMAD4-206ENST00000588860 CXCR5P32302 372 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 PSEN2P49810 448 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 CPT1AP50416 773 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 TFAMQ00059 246 aaKnown RBP9.4□□□□□ -0.9
SMAD4-206ENST00000588860 FMO1Q01740 532 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 CDR2Q01850 454 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 C2orf54Q08AI8 447 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 CUL2Q13617 745 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 AMHR2Q16671 573 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 DUOXA2Q1HG44 320 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 CCDC181Q5TID7 509 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 CEP120Q8N960 986 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 LRRC57Q8N9N7 239 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 NOA1Q8NC60 698 aaKnown RBP9.4□□□□□ -0.9
SMAD4-206ENST00000588860 PPP1R13LQ8WUF5 828 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 ARHGEF26Q96DR7 871 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 ANKRD36BP1Q96IX9 119 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 RPGRIP1Q96KN7 1286 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 PCDHB18PQ96TA0 734 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 RHOXF2Q9BQY4 288 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 IMPG2Q9BZV3 1241 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 THAP2Q9H0W7 228 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 ACP6Q9NPH0 428 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 GJD2Q9UKL4 321 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 PACSIN2Q9UNF0 486 aaPredicted RBP9.4□□□□□ -0.9
SMAD4-206ENST00000588860 PCDHB4Q9Y5E5 795 aa9.4□□□□□ -0.9
SMAD4-206ENST00000588860 GPR25O00155 361 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 ARHGAP33O14559 1287 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 TSPAN1O60635 241 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 KIF4AO95239 1232 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 TBC1D8O95759 1140 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 F2P00734 622 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 STAG3L1P0CL83 205 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 CYP2C9P11712 490 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 ARF4P18085 180 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-206ENST00000588860 CTGFP29279 349 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 PAFAH1B1P43034 410 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 TM4SF4P48230 202 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 FCGRTP55899 365 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 BPIFB4P59827 614 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 MYL6P60660 151 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 GPC5P78333 572 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 BEX3Q00994 111 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 TMEM62Q0P6H9 643 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 TRPC3Q13507 836 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 RPS6KA1Q15418 735 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 PTPROQ16827 1216 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 CLEC16AQ2KHT3 1053 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 ADGRD1Q6QNK2 874 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 RUFY4Q6ZNE9 571 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 PEX26Q7Z412 305 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 ZNF410Q86VK4 478 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 CREG2Q8IUH2 290 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 EFCAB13Q8IY85 973 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 TMEM192Q8IY95 271 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 KIAA0319LQ8IZA0 1049 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 SYCE1Q8N0S2 351 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 RBBP8NLQ8NC74 664 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-206ENST00000588860 SLC35G2Q8TBE7 412 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 KAT2BQ92831 832 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 PARD6BQ9BYG5 372 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 ISCUQ9H1K1 167 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 GOLPH3Q9H4A6 298 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 OSGEPQ9NPF4 335 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 SMARCAL1Q9NZC9 954 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 EHD2Q9NZN4 543 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 NUB1Q9Y5A7 615 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 FRMPD3Q5JV73 1810 aa9.39□□□□□ -0.91
SMAD4-206ENST00000588860 NRCAMQ92823 1304 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 TMEM110-MUSTN1A8MSY1 372 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 LACTBL1A8MY62 500 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 KCNK3O14649 394 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 B4GALT4O60513 344 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 BUB1BO60566 1050 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-206ENST00000588860 ASS1P00966 412 aaKnown RBP9.38□□□□□ -0.91
SMAD4-206ENST00000588860 NFICP08651 508 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 GZMAP12544 262 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 ACO1P21399 889 aaKnown RBP9.38□□□□□ -0.91
SMAD4-206ENST00000588860 FGFR4P22455 802 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 FSCN1Q16658 493 aaKnown RBP9.38□□□□□ -0.91
SMAD4-206ENST00000588860 KYAT1Q16773 422 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 KIZQ2M2Z5 673 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 ZNF699Q32M78 642 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 SCARA3Q6AZY7 606 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 ACAD10Q6JQN1 1059 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 FBXO46Q6PJ61 603 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-206ENST00000588860 SCARA5Q6ZMJ2 495 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 ZNF572Q7Z3I7 529 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-206ENST00000588860 APBB1IPQ7Z5R6 666 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-206ENST00000588860 SLFN11Q7Z7L1 901 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 DAAM2Q86T65 1068 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 RHOT2Q8IXI1 618 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 MSANTD4Q8NCY6 345 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 TRPV1Q8NER1 839 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 DDX1Q92499 740 aaKnown RBP9.38□□□□□ -0.91
SMAD4-206ENST00000588860 ZNF653Q96CK0 615 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms