RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 PIRO00625 290 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 TADA2AO75478 443 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 EFEMP2O95967 443 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 POLR2BP30876 1174 aaKnown RBP20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 MCCD1P59942 119 aaPredicted RBP20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 KRT17Q04695 432 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 FUT10Q6P4F1 479 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 TRAPPC11Q7Z392 1133 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 IRF2BP1Q8IU81 584 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 CNOT6LQ96LI5 555 aaKnown RBP20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 GPR62Q9BZJ7 368 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 MMRN2Q9H8L6 949 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 METTL14Q9HCE5 456 aaKnown RBP20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 ITGA11Q9UKX5 1188 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 NFE2L3Q9Y4A8 694 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 I3L4J1 428 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 IKBKBO14920 756 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 GNA14O95837 355 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 KRT19P08727 400 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 BRCC3P46736 316 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 MARSP56192 900 aaKnown RBP20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 PPP3CAQ08209 521 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 HSP90AA4PQ58FG1 418 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 TCERG1LQ5VWI1 586 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 TDRD10Q5VZ19 366 aaKnown RBP20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 DDX53Q86TM3 631 aaKnown RBP20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 RNF168Q8IYW5 571 aaPredicted RBP20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 DEFB123Q8N688 67 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 THAP9Q9H5L6 903 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 AGAP1Q9UPQ3 857 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 LZTS1Q9Y250 596 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 NUB1Q9Y5A7 615 aa20.48■□□□□ 0.87
CLPTM1-209ENST00000588855 SF3B1O75533 1304 aaKnown RBP eCLIP20.47■□□□□ 0.87
CLPTM1-209ENST00000588855 C4BPAP04003 597 aaKnown RBP20.47■□□□□ 0.87
CLPTM1-209ENST00000588855 GCLMP48507 274 aa20.47■□□□□ 0.87
CLPTM1-209ENST00000588855 TSC2P49815 1807 aa20.47■□□□□ 0.87
CLPTM1-209ENST00000588855 AP3M2P53677 418 aa20.47■□□□□ 0.87
CLPTM1-209ENST00000588855 UBE3AQ05086 875 aa20.47■□□□□ 0.87
CLPTM1-209ENST00000588855 MYO7AQ13402 2215 aa20.47■□□□□ 0.87
CLPTM1-209ENST00000588855 BIRC3Q13489 604 aa20.47■□□□□ 0.87
CLPTM1-209ENST00000588855 CAMK1Q14012 370 aa20.47■□□□□ 0.87
CLPTM1-209ENST00000588855 SV2AQ7L0J3 742 aa20.47■□□□□ 0.87
CLPTM1-209ENST00000588855 TAS1R1Q7RTX1 841 aa20.47■□□□□ 0.87
CLPTM1-209ENST00000588855 SLC35C1Q96A29 364 aa20.47■□□□□ 0.87
CLPTM1-209ENST00000588855 SAMSN1Q9NSI8 373 aaKnown RBP20.47■□□□□ 0.87
CLPTM1-209ENST00000588855 SPTLC1O15269 473 aa20.46■□□□□ 0.87
CLPTM1-209ENST00000588855 MYL5Q02045 173 aa20.46■□□□□ 0.87
CLPTM1-209ENST00000588855 ZACNQ401N2 412 aa20.46■□□□□ 0.87
CLPTM1-209ENST00000588855 C15orf39Q6ZRI6 1047 aa20.46■□□□□ 0.87
CLPTM1-209ENST00000588855 TRIM59Q8IWR1 403 aa20.46■□□□□ 0.87
CLPTM1-209ENST00000588855 VPS52Q8N1B4 723 aa20.46■□□□□ 0.87
CLPTM1-209ENST00000588855 AOPEPQ8N6M6 819 aa20.46■□□□□ 0.87
CLPTM1-209ENST00000588855 ZNF560Q96MR9 790 aa20.46■□□□□ 0.87
CLPTM1-209ENST00000588855 BPIFA3Q9BQP9 254 aa20.46■□□□□ 0.87
CLPTM1-209ENST00000588855 HERC2P3Q9BVR0 1158 aa20.46■□□□□ 0.87
CLPTM1-209ENST00000588855 NAT10Q9H0A0 1025 aaKnown RBP20.46■□□□□ 0.87
CLPTM1-209ENST00000588855 ZBP1Q9H171 429 aa20.46■□□□□ 0.87
CLPTM1-209ENST00000588855 TLR9Q9NR96 1032 aa20.46■□□□□ 0.87
CLPTM1-209ENST00000588855 PUF60Q9UHX1 559 aaKnown RBP20.46■□□□□ 0.87
CLPTM1-209ENST00000588855 CST3P01034 146 aaPredicted RBP20.45■□□□□ 0.86
CLPTM1-209ENST00000588855 SOD2P04179 222 aa20.45■□□□□ 0.86
CLPTM1-209ENST00000588855 IRS1P35568 1242 aa20.45■□□□□ 0.86
CLPTM1-209ENST00000588855 LILRA4P59901 499 aa20.45■□□□□ 0.86
CLPTM1-209ENST00000588855 ERVFC1P60507 584 aa20.45■□□□□ 0.86
CLPTM1-209ENST00000588855 RBP5P82980 135 aa20.45■□□□□ 0.86
CLPTM1-209ENST00000588855 ADGRE1Q14246 886 aa20.45■□□□□ 0.86
CLPTM1-209ENST00000588855 NCAPHQ15003 741 aa20.45■□□□□ 0.86
CLPTM1-209ENST00000588855 TIGD5Q53EQ6 642 aa20.45■□□□□ 0.86
CLPTM1-209ENST00000588855 CREBRFQ8IUR6 639 aa20.45■□□□□ 0.86
CLPTM1-209ENST00000588855 B3GALT6Q96L58 329 aa20.45■□□□□ 0.86
CLPTM1-209ENST00000588855 GUCD1Q96NT3 240 aa20.45■□□□□ 0.86
CLPTM1-209ENST00000588855 PCDHGC5Q9Y5F6 944 aa20.45■□□□□ 0.86
CLPTM1-209ENST00000588855 PHACTR2O75167 634 aa20.44■□□□□ 0.86
CLPTM1-209ENST00000588855 VNN1O95497 513 aa20.44■□□□□ 0.86
CLPTM1-209ENST00000588855 AARSP49588 968 aaKnown RBP eCLIP20.44■□□□□ 0.86
CLPTM1-209ENST00000588855 TAF6P49848 677 aa20.44■□□□□ 0.86
CLPTM1-209ENST00000588855 ZNF165P49910 485 aa20.44■□□□□ 0.86
CLPTM1-209ENST00000588855 MXI1P50539 228 aa20.44■□□□□ 0.86
CLPTM1-209ENST00000588855 FAM171A1Q5VUB5 890 aa20.44■□□□□ 0.86
CLPTM1-209ENST00000588855 LRRC52Q8N7C0 313 aa20.44■□□□□ 0.86
CLPTM1-209ENST00000588855 SUSD3Q96L08 255 aa20.44■□□□□ 0.86
CLPTM1-209ENST00000588855 LMAN2LQ9H0V9 348 aa20.44■□□□□ 0.86
CLPTM1-209ENST00000588855 TMEM8AQ9HCN3 771 aa20.44■□□□□ 0.86
CLPTM1-209ENST00000588855 FANCLQ9NW38 375 aa20.44■□□□□ 0.86
CLPTM1-209ENST00000588855 R3HCC1Q9Y3T6 440 aaKnown RBP20.44■□□□□ 0.86
CLPTM1-209ENST00000588855 EYSQ5T1H1 3165 aa20.44■□□□□ 0.86
CLPTM1-209ENST00000588855 STX10O60499 249 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 GTF2H1P32780 548 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 PNPLA4P41247 253 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 ELAVL2Q12926 359 aaKnown RBP20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 NCOA4Q13772 614 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 SV2CQ496J9 727 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 CBWD6Q4V339 395 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 CBWD3Q5JTY5 395 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 CBWD5Q5RIA9 395 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 PLPP4Q5VZY2 271 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 TMC7Q7Z402 723 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 FAM114A1Q8IWE2 563 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 AUTS2Q8WXX7 1259 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 MYLIPQ8WY64 445 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms