RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 PAK1Q13153 545 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 PSMD2Q13200 908 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 HTR4Q13639 388 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 TPD52L1Q16890 204 aaPredicted RBP8.55□□□□□ -1.04
VMP1-204ENST00000587259 TMEM119Q4V9L6 283 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 XKR9Q5GH70 373 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 SPATA1Q5VX52 437 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 FOXR2Q6PJQ5 311 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 PARM1Q6UWI2 310 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 GRASPQ7Z6J2 395 aaPredicted RBP8.55□□□□□ -1.04
VMP1-204ENST00000587259 FAM114A1Q8IWE2 563 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 RNF168Q8IYW5 571 aaPredicted RBP8.55□□□□□ -1.04
VMP1-204ENST00000587259 MAML2Q8IZL2 1156 aaPredicted RBP8.55□□□□□ -1.04
VMP1-204ENST00000587259 RDM1Q8NG50 284 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 NOC3LQ8WTT2 800 aaKnown RBP8.55□□□□□ -1.04
VMP1-204ENST00000587259 PSPC1Q8WXF1 523 aaKnown RBP8.55□□□□□ -1.04
VMP1-204ENST00000587259 SLC7A3Q8WY07 619 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 RAD54LQ92698 747 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 HAS1Q92839 578 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 ERCC4Q92889 916 aaPredicted RBP8.55□□□□□ -1.04
VMP1-204ENST00000587259 FGF14Q92915 247 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 LXNQ9BS40 222 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 TRIM9Q9C026 710 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 DHX33Q9H6R0 707 aaKnown RBP8.55□□□□□ -1.04
VMP1-204ENST00000587259 PIDD1Q9HB75 910 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 XPNPEP1Q9NQW7 623 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 ARHGEF3Q9NR81 526 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 DLGAP2Q9P1A6 1054 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 IGSF9Q9P2J2 1179 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 EPS15L1Q9UBC2 864 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 WNT16Q9UBV4 365 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 RWDD2AQ9UIY3 292 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 CASTOR2A6NHX0 329 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 INO80B-WBP1J3KQ70 363 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 CCL16O15467 120 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 GAS2O43903 313 aaKnown RBP8.54□□□□□ -1.04
VMP1-204ENST00000587259 ERLIN2O94905 339 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 NPTXRO95502 500 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 FGFR1OPO95684 399 aaKnown RBP8.54□□□□□ -1.04
VMP1-204ENST00000587259 SERPINC1P01008 464 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 TPM2P07951 284 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 SRFP11831 508 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 LAMP2P13473 410 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 PRKCSHP14314 528 aaPredicted RBP8.54□□□□□ -1.04
VMP1-204ENST00000587259 ARF4P18085 180 aaPredicted RBP8.54□□□□□ -1.04
VMP1-204ENST00000587259 RPA1P27694 616 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 YWHABP31946 246 aaKnown RBP8.54□□□□□ -1.04
VMP1-204ENST00000587259 CCT6AP40227 531 aaKnown RBP8.54□□□□□ -1.04
VMP1-204ENST00000587259 ASIC1P78348 528 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 DSG1Q02413 1049 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 PPP2R5CQ13362 524 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 CAPSQ13938 189 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 NCAPHQ15003 741 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 AMHR2Q16671 573 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 FILIP1LQ4L180 1135 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 RTP2Q5QGT7 225 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 FUT10Q6P4F1 479 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 DCLRE1AQ6PJP8 1040 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 UNC13DQ70J99 1090 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 MAEAQ7L5Y9 396 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 ERMP1Q7Z2K6 904 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 DGLUCYQ7Z3D6 616 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 SRGAP1Q7Z6B7 1085 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 CEP57Q86XR8 500 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 TPH2Q8IWU9 490 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 CCDC150Q8NCX0 1101 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 GSTCDQ8NEC7 633 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 CMASQ8NFW8 434 aaPredicted RBP8.54□□□□□ -1.04
VMP1-204ENST00000587259 ING5Q8WYH8 240 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 KCTD12Q96CX2 325 aaKnown RBP8.54□□□□□ -1.04
VMP1-204ENST00000587259 DHTKD1Q96HY7 919 aaPredicted RBP8.54□□□□□ -1.04
VMP1-204ENST00000587259 POLR3CQ9BUI4 534 aaPredicted RBP8.54□□□□□ -1.04
VMP1-204ENST00000587259 RXFP1Q9HBX9 757 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 TUFT1Q9NNX1 390 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 RTN4Q9NQC3 1192 aaKnown RBP8.54□□□□□ -1.04
VMP1-204ENST00000587259 CHST7Q9NS84 486 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 HCFC1R1Q9NWW0 138 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 KCND2Q9NZV8 630 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 VPS9D1Q9Y2B5 631 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 SIT1Q9Y3P8 196 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 NFE2L3Q9Y4A8 694 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 CEP250Q9BV73 2442 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 CNTNAP2Q9UHC6 1331 aa8.54□□□□□ -1.04
VMP1-204ENST00000587259 OTOGLQ3ZCN5 2332 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 CACNA1IQ9P0X4 2223 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 SPTBN2O15020 2390 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 PP2D1A8MPX8 630 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 ANHXE9PGG2 379 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 P4HBP07237 508 aaKnown RBP8.53□□□□□ -1.04
VMP1-204ENST00000587259 CDK11BP21127 795 aaKnown RBP8.53□□□□□ -1.04
VMP1-204ENST00000587259 FSHRP23945 695 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 UBASH3AP57075 661 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 CDC42EP1Q00587 391 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 MBTD1Q05BQ5 628 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 SPIRE1Q08AE8 756 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 CUL4BQ13620 913 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 LILRA6Q6PI73 481 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 TSSK4Q6SA08 328 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 C1orf210Q8IVY1 113 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 CCDC65Q8IXS2 484 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms