RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ARID3AQ99856 593 aa21.96■■□□□ 1.11
ATG4D-204ENST00000586417 AGPAT1Q99943 283 aa21.96■■□□□ 1.11
ATG4D-204ENST00000586417 PPP1R12CQ9BZL4 782 aa21.96■■□□□ 1.11
ATG4D-204ENST00000586417 MTMR12Q9C0I1 747 aa21.96■■□□□ 1.11
ATG4D-204ENST00000586417 HIPK3Q9H422 1215 aa21.96■■□□□ 1.11
ATG4D-204ENST00000586417 NOCTQ9UK39 431 aaKnown RBP21.96■■□□□ 1.11
ATG4D-204ENST00000586417 TBX21Q9UL17 535 aa21.96■■□□□ 1.11
ATG4D-204ENST00000586417 SCN5AQ14524 2016 aa21.95■■□□□ 1.1
ATG4D-204ENST00000586417 BTNL10A8MVZ5 291 aa21.95■■□□□ 1.1
ATG4D-204ENST00000586417 CYP26A1O43174 497 aa21.95■■□□□ 1.1
ATG4D-204ENST00000586417 ERLIN2O94905 339 aa21.95■■□□□ 1.1
ATG4D-204ENST00000586417 STAG3L1P0CL83 205 aa21.95■■□□□ 1.1
ATG4D-204ENST00000586417 POU5F1Q01860 360 aaKnown RBP21.95■■□□□ 1.1
ATG4D-204ENST00000586417 NCOA4Q13772 614 aa21.95■■□□□ 1.1
ATG4D-204ENST00000586417 LPIN1Q14693 890 aa21.95■■□□□ 1.1
ATG4D-204ENST00000586417 LRRC8DQ7L1W4 858 aa21.95■■□□□ 1.1
ATG4D-204ENST00000586417 TRAPPC11Q7Z392 1133 aa21.95■■□□□ 1.1
ATG4D-204ENST00000586417 DNAAF5Q86Y56 855 aa21.95■■□□□ 1.1
ATG4D-204ENST00000586417 PALB2Q86YC2 1186 aa21.95■■□□□ 1.1
ATG4D-204ENST00000586417 TRIM58Q8NG06 486 aa21.95■■□□□ 1.1
ATG4D-204ENST00000586417 CCDC85CA6NKD9 419 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 IL18RAPO95256 599 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 CLTAP09496 248 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 CLTBP09497 229 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 SELPP16109 830 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 HOXA11P31270 313 aaPredicted RBP21.94■■□□□ 1.1
ATG4D-204ENST00000586417 USP8P40818 1118 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 BFSP2Q13515 415 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 GPNMBQ14956 572 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 DUOXA2Q1HG44 320 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 NOP9Q86U38 636 aaKnown RBP21.94■■□□□ 1.1
ATG4D-204ENST00000586417 LRRN4CLQ8ND94 238 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 TSC1Q92574 1164 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 RPF1Q9H9Y2 349 aaKnown RBP21.94■■□□□ 1.1
ATG4D-204ENST00000586417 TMEM39AQ9NV64 488 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 PITPNM1O00562 1244 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 TACC1O75410 805 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 RPS6KA5O75582 802 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 CST3P01034 146 aaPredicted RBP21.94■■□□□ 1.1
ATG4D-204ENST00000586417 ATP1A1P05023 1023 aaKnown RBP21.94■■□□□ 1.1
ATG4D-204ENST00000586417 CHRNB2P17787 502 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 CYP2C18P33260 490 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 SLC47A2Q86VL8 602 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 WNT8AQ9H1J5 351 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 ACP6Q9NPH0 428 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 INTUQ9ULD6 942 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 ST3GAL5Q9UNP4 418 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 NUB1Q9Y5A7 615 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 TET1Q8NFU7 2136 aa21.94■■□□□ 1.1
ATG4D-204ENST00000586417 ANO9A1A5B4 782 aa21.93■■□□□ 1.1
ATG4D-204ENST00000586417 ENC1O14682 589 aa21.93■■□□□ 1.1
ATG4D-204ENST00000586417 PHACTR2O75167 634 aa21.93■■□□□ 1.1
ATG4D-204ENST00000586417 ASS1P00966 412 aaKnown RBP21.93■■□□□ 1.1
ATG4D-204ENST00000586417 TNFAIP3P21580 790 aa21.93■■□□□ 1.1
ATG4D-204ENST00000586417 CD52P31358 61 aa21.93■■□□□ 1.1
ATG4D-204ENST00000586417 CCL23P55773 120 aa21.93■■□□□ 1.1
ATG4D-204ENST00000586417 NOP14P78316 857 aaKnown RBP21.93■■□□□ 1.1
ATG4D-204ENST00000586417 CUL2Q13617 745 aa21.93■■□□□ 1.1
ATG4D-204ENST00000586417 PAPD7Q5XG87 772 aaKnown RBP21.93■■□□□ 1.1
ATG4D-204ENST00000586417 SCLYQ96I15 445 aa21.93■■□□□ 1.1
ATG4D-204ENST00000586417 NOX5Q96PH1 765 aa21.93■■□□□ 1.1
ATG4D-204ENST00000586417 CDC23Q9UJX2 597 aa21.93■■□□□ 1.1
ATG4D-204ENST00000586417 TRIM43BA6NCK2 446 aa21.92■■□□□ 1.1
ATG4D-204ENST00000586417 DYNC1I1O14576 645 aa21.92■■□□□ 1.1
ATG4D-204ENST00000586417 BUB1O43683 1085 aa21.92■■□□□ 1.1
ATG4D-204ENST00000586417 H2AFZP0C0S5 128 aa21.92■■□□□ 1.1
ATG4D-204ENST00000586417 ACO1P21399 889 aaKnown RBP21.92■■□□□ 1.1
ATG4D-204ENST00000586417 ITGB8P26012 769 aa21.92■■□□□ 1.1
ATG4D-204ENST00000586417 NFX1Q12986 1120 aaKnown RBP21.92■■□□□ 1.1
ATG4D-204ENST00000586417 KYAT1Q16773 422 aa21.92■■□□□ 1.1
ATG4D-204ENST00000586417 H2AFVQ71UI9 128 aa21.92■■□□□ 1.1
ATG4D-204ENST00000586417 TRIM43Q96BQ3 446 aaPredicted RBP21.92■■□□□ 1.1
ATG4D-204ENST00000586417 PADI3Q9ULW8 664 aa21.92■■□□□ 1.1
ATG4D-204ENST00000586417 TANC1Q9C0D5 1861 aa21.92■■□□□ 1.1
ATG4D-204ENST00000586417 LACTBL1A8MY62 500 aa21.92■■□□□ 1.1
ATG4D-204ENST00000586417 NBNO60934 754 aa21.92■■□□□ 1.1
ATG4D-204ENST00000586417 CYP11B1P15538 503 aa21.92■■□□□ 1.1
ATG4D-204ENST00000586417 TFAMQ00059 246 aaKnown RBP21.92■■□□□ 1.1
ATG4D-204ENST00000586417 TUBB2AQ13885 445 aa21.92■■□□□ 1.1
ATG4D-204ENST00000586417 PCBP1Q15365 356 aaKnown RBP eCLIP21.92■■□□□ 1.1
ATG4D-204ENST00000586417 SLC10A6Q3KNW5 377 aa21.92■■□□□ 1.1
ATG4D-204ENST00000586417 RPUSD2Q8IZ73 545 aaKnown RBP21.92■■□□□ 1.1
ATG4D-204ENST00000586417 DDX1Q92499 740 aaKnown RBP21.92■■□□□ 1.1
ATG4D-204ENST00000586417 TUBB2BQ9BVA1 445 aa21.92■■□□□ 1.1
ATG4D-204ENST00000586417 CARD6Q9BX69 1037 aa21.92■■□□□ 1.1
ATG4D-204ENST00000586417 PRDM5Q9NQX1 630 aaPredicted RBP21.92■■□□□ 1.1
ATG4D-204ENST00000586417 TAS2R14Q9NYV8 317 aa21.92■■□□□ 1.1
ATG4D-204ENST00000586417 PIN4Q9Y237 131 aaKnown RBP21.92■■□□□ 1.1
ATG4D-204ENST00000586417 MYH10P35580 1976 aa21.92■■□□□ 1.1
ATG4D-204ENST00000586417 NFICP08651 508 aa21.91■■□□□ 1.1
ATG4D-204ENST00000586417 TMEM191BP0C7N4 346 aa21.91■■□□□ 1.1
ATG4D-204ENST00000586417 TNS4Q8IZW8 715 aa21.91■■□□□ 1.1
ATG4D-204ENST00000586417 ALS2CR12Q96Q35 445 aa21.91■■□□□ 1.1
ATG4D-204ENST00000586417 PCDHB18PQ96TA0 734 aa21.91■■□□□ 1.1
ATG4D-204ENST00000586417 ADPGKQ9BRR6 497 aa21.91■■□□□ 1.1
ATG4D-204ENST00000586417 ERVK-5Q9HDB9 667 aa21.91■■□□□ 1.1
ATG4D-204ENST00000586417 JRKLQ9Y4A0 524 aa21.91■■□□□ 1.1
ATG4D-204ENST00000586417 PCDHGC5Q9Y5F6 944 aa21.91■■□□□ 1.1
ATG4D-204ENST00000586417 TBXAS1P24557 533 aaPredicted RBP21.9■■□□□ 1.1
ATG4D-204ENST00000586417 GALCP54803 685 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms