RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 CYP1A1P04798 512 aaPredicted RBP12.04□□□□□ -0.48
LIG3-204ENST00000585740 GNA15P30679 374 aa12.04□□□□□ -0.48
LIG3-204ENST00000585740 TNFSF9P41273 254 aa12.04□□□□□ -0.48
LIG3-204ENST00000585740 ADCYAP1R1P41586 468 aa12.04□□□□□ -0.48
LIG3-204ENST00000585740 NSFP46459 744 aaKnown RBP12.04□□□□□ -0.48
LIG3-204ENST00000585740 IGBP1P78318 339 aa12.04□□□□□ -0.48
LIG3-204ENST00000585740 CENPCQ03188 943 aa12.04□□□□□ -0.48
LIG3-204ENST00000585740 MESDQ14696 234 aa12.04□□□□□ -0.48
LIG3-204ENST00000585740 PKN2Q16513 984 aaKnown RBP12.04□□□□□ -0.48
LIG3-204ENST00000585740 HSP90B2PQ58FF3 399 aa12.04□□□□□ -0.48
LIG3-204ENST00000585740 HABP4Q5JVS0 413 aaKnown RBP12.04□□□□□ -0.48
LIG3-204ENST00000585740 SEL1L2Q5TEA6 688 aa12.04□□□□□ -0.48
LIG3-204ENST00000585740 MTHFD1LQ6UB35 978 aa12.04□□□□□ -0.48
LIG3-204ENST00000585740 ZNF410Q86VK4 478 aa12.04□□□□□ -0.48
LIG3-204ENST00000585740 UBR7Q8N806 425 aa12.04□□□□□ -0.48
LIG3-204ENST00000585740 RBBP8NLQ8NC74 664 aaPredicted RBP12.04□□□□□ -0.48
LIG3-204ENST00000585740 TRAPPC12Q8WVT3 735 aa12.04□□□□□ -0.48
LIG3-204ENST00000585740 RUNDC3BQ96NL0 473 aa12.04□□□□□ -0.48
LIG3-204ENST00000585740 ZSWIM1Q9BR11 485 aa12.04□□□□□ -0.48
LIG3-204ENST00000585740 NIF3L1Q9GZT8 377 aa12.04□□□□□ -0.48
LIG3-204ENST00000585740 GOLPH3Q9H4A6 298 aa12.04□□□□□ -0.48
LIG3-204ENST00000585740 TUT1Q9H6E5 874 aaKnown RBP12.04□□□□□ -0.48
LIG3-204ENST00000585740 APOBEC3GQ9HC16 384 aaKnown RBP12.04□□□□□ -0.48
LIG3-204ENST00000585740 DMGDHQ9UI17 866 aaKnown RBP12.04□□□□□ -0.48
LIG3-204ENST00000585740 AKT3Q9Y243 479 aa12.04□□□□□ -0.48
LIG3-204ENST00000585740 CITO14578 2027 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 MMP3P08254 477 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 OAS2P29728 719 aaKnown RBP12.03□□□□□ -0.48
LIG3-204ENST00000585740 SLC1A1P43005 524 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 AARSP49588 968 aaKnown RBP eCLIP12.03□□□□□ -0.48
LIG3-204ENST00000585740 ZNF132P52740 706 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 PPFIA1Q13136 1202 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 CUL1Q13616 776 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 PCBP1Q15365 356 aaKnown RBP eCLIP12.03□□□□□ -0.48
LIG3-204ENST00000585740 SPOPLQ6IQ16 392 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 TMEM270Q6UE05 265 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 NT5DC4Q86YG4 428 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 CD302Q8IX05 232 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 MCOLN2Q8IZK6 566 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 FAM71BQ8TC56 605 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 WHAMMQ8TF30 809 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 RNPC3Q96LT9 517 aaKnown RBP12.03□□□□□ -0.48
LIG3-204ENST00000585740 C16orf70Q9BSU1 422 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 ZNF518BQ9C0D4 1074 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 CDT1Q9H211 546 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 FAM124BQ9H5Z6 455 aaPredicted RBP12.03□□□□□ -0.48
LIG3-204ENST00000585740 ASB7Q9H672 318 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 MRPL47Q9HD33 250 aaKnown RBP12.03□□□□□ -0.48
LIG3-204ENST00000585740 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.03□□□□□ -0.48
LIG3-204ENST00000585740 ZHX1Q9UKY1 873 aaPredicted RBP12.03□□□□□ -0.48
LIG3-204ENST00000585740 NUB1Q9Y5A7 615 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 SCINQ9Y6U3 715 aa12.03□□□□□ -0.48
LIG3-204ENST00000585740 MGAMO43451 1857 aa12.02□□□□□ -0.48
LIG3-204ENST00000585740 RALGAPA2Q2PPJ7 1873 aa12.02□□□□□ -0.48
LIG3-204ENST00000585740 A0A087WZ62 844 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 TTLL13PA6NNM8 815 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 THAP12O43422 761 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 SPOPO43791 374 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 LSM8O95777 96 aaKnown RBP12.02□□□□□ -0.49
LIG3-204ENST00000585740 FGGP02679 453 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 SMPD1P17405 629 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 COMTP21964 271 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 ATICP31939 592 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 CTNNA1P35221 906 aaKnown RBP12.02□□□□□ -0.49
LIG3-204ENST00000585740 RNASE9P60153 205 aaKnown RBP12.02□□□□□ -0.49
LIG3-204ENST00000585740 TFAMQ00059 246 aaKnown RBP12.02□□□□□ -0.49
LIG3-204ENST00000585740 SLC7A5Q01650 507 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 GUCY2DQ02846 1103 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 C1QBPQ07021 282 aaKnown RBP12.02□□□□□ -0.49
LIG3-204ENST00000585740 MAP2K5Q13163 448 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 GRIK4Q16099 956 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 ZNF699Q32M78 642 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 MORN1Q5T089 497 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 TMEM63BQ5T3F8 832 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 EEF1DP3Q658K8 133 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 PHF13Q86YI8 300 aaPredicted RBP12.02□□□□□ -0.49
LIG3-204ENST00000585740 KLHL7Q8IXQ5 586 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 REM2Q8IYK8 340 aaPredicted RBP12.02□□□□□ -0.49
LIG3-204ENST00000585740 THNSL1Q8IYQ7 743 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 GOLGA6L1Q8N7Z2 621 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 ZNF296Q8WUU4 475 aaPredicted RBP12.02□□□□□ -0.49
LIG3-204ENST00000585740 MAIP1Q8WWC4 291 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 FAM212AQ96EL1 285 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 PTPN18Q99952 460 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 FDXACB1Q9BRP7 624 aaPredicted RBP12.02□□□□□ -0.49
LIG3-204ENST00000585740 ADPGKQ9BRR6 497 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 MTMR12Q9C0I1 747 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 IFT122Q9HBG6 1241 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 EPB41L5Q9HCM4 733 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 ACP6Q9NPH0 428 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 HPCAL4Q9UM19 191 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 PCDHA3Q9Y5H8 950 aa12.02□□□□□ -0.49
LIG3-204ENST00000585740 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.01□□□□□ -0.49
LIG3-204ENST00000585740 FAM187AA6NFU0 413 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 TMEM110-MUSTN1A8MSY1 372 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 BHMG1C9JSJ3 638 aaPredicted RBP12.01□□□□□ -0.49
LIG3-204ENST00000585740 SART1O43290 800 aaKnown RBP12.01□□□□□ -0.49
LIG3-204ENST00000585740 RAD51CO43502 376 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 ZMYND10O75800 440 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 CALB1P05937 261 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms