RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PHLPP2Q6ZVD8 1323 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 CACNA1IQ9P0X4 2223 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 SFI1A8K8P3 1242 aa15.83■□□□□ 0.12
SDF2-202ENST00000585428 EIF5BO60841 1220 aaKnown RBP15.83■□□□□ 0.12
SDF2-202ENST00000585428 MOSPD3O75425 235 aa15.83■□□□□ 0.12
SDF2-202ENST00000585428 CDC25AP30304 524 aa15.83■□□□□ 0.12
SDF2-202ENST00000585428 ARPP19P56211 112 aa15.83■□□□□ 0.12
SDF2-202ENST00000585428 HMGN5P82970 282 aaKnown RBP15.83■□□□□ 0.12
SDF2-202ENST00000585428 DMP1Q13316 513 aaPredicted RBP15.83■□□□□ 0.12
SDF2-202ENST00000585428 MPZL3Q6UWV2 235 aa15.83■□□□□ 0.12
SDF2-202ENST00000585428 KCNK18Q7Z418 384 aa15.83■□□□□ 0.12
SDF2-202ENST00000585428 SNX29Q8TEQ0 813 aa15.83■□□□□ 0.12
SDF2-202ENST00000585428 DRC1Q96MC2 740 aa15.83■□□□□ 0.12
SDF2-202ENST00000585428 RUSC1Q9BVN2 902 aa15.83■□□□□ 0.12
SDF2-202ENST00000585428 TRMT61BQ9BVS5 477 aaKnown RBP15.83■□□□□ 0.12
SDF2-202ENST00000585428 PRMT8Q9NR22 394 aaPredicted RBP15.83■□□□□ 0.12
SDF2-202ENST00000585428 CEP72Q9P209 647 aa15.83■□□□□ 0.12
SDF2-202ENST00000585428 NOL7Q9UMY1 257 aaKnown RBP15.83■□□□□ 0.12
SDF2-202ENST00000585428 INSL5Q9Y5Q6 135 aa15.83■□□□□ 0.12
SDF2-202ENST00000585428 PP2D1A8MPX8 630 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 MAN2B1O00754 1011 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 SLC16A4O15374 487 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 TOM1L1O75674 476 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 TGM1P22735 817 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 GUCY2CP25092 1073 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 PRPHP41219 470 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 EPHA5P54756 1037 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 MTAPQ13126 283 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 CTXN3Q4LDR2 81 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 CYP4A22Q5TCH4 519 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 HS6ST3Q8IZP7 471 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 GPR161Q8N6U8 529 aaKnown RBP15.82■□□□□ 0.12
SDF2-202ENST00000585428 SPIRE2Q8WWL2 714 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 DDX12PQ92771 950 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 ZSCAN31Q96LW9 406 aaPredicted RBP15.82■□□□□ 0.12
SDF2-202ENST00000585428 ZNF512Q96ME7 567 aaPredicted RBP15.82■□□□□ 0.12
SDF2-202ENST00000585428 TBC1D32Q96NH3 1257 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 TIPINQ9BVW5 301 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 FAM126AQ9BYI3 521 aaPredicted RBP15.82■□□□□ 0.12
SDF2-202ENST00000585428 RAB34Q9BZG1 259 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 EPC1Q9H2F5 836 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 TRPV4Q9HBA0 871 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 ZNF334Q9HCZ1 680 aaPredicted RBP15.82■□□□□ 0.12
SDF2-202ENST00000585428 AFF4Q9UHB7 1163 aaKnown RBP15.82■□□□□ 0.12
SDF2-202ENST00000585428 KCNG1Q9UIX4 513 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 NUB1Q9Y5A7 615 aa15.82■□□□□ 0.12
SDF2-202ENST00000585428 LAD1O00515 517 aa15.81■□□□□ 0.12
SDF2-202ENST00000585428 OAZ2O95190 189 aa15.81■□□□□ 0.12
SDF2-202ENST00000585428 TDGF1P13385 188 aa15.81■□□□□ 0.12
SDF2-202ENST00000585428 GRM2Q14416 872 aa15.81■□□□□ 0.12
SDF2-202ENST00000585428 ZBTB6Q15916 424 aa15.81■□□□□ 0.12
SDF2-202ENST00000585428 RSPO4Q2I0M5 234 aaPredicted RBP15.81■□□□□ 0.12
SDF2-202ENST00000585428 KRT79Q5XKE5 535 aa15.81■□□□□ 0.12
SDF2-202ENST00000585428 TSSK4Q6SA08 328 aa15.81■□□□□ 0.12
SDF2-202ENST00000585428 VITQ6UXI7 678 aa15.81■□□□□ 0.12
SDF2-202ENST00000585428 RNF19BQ6ZMZ0 732 aa15.81■□□□□ 0.12
SDF2-202ENST00000585428 PDZD4Q76G19 769 aaPredicted RBP15.81■□□□□ 0.12
SDF2-202ENST00000585428 TMEM161BQ8NDZ6 487 aa15.81■□□□□ 0.12
SDF2-202ENST00000585428 APPL2Q8NEU8 664 aa15.81■□□□□ 0.12
SDF2-202ENST00000585428 BEST2Q8NFU1 509 aa15.81■□□□□ 0.12
SDF2-202ENST00000585428 SMARCD2Q92925 531 aa15.81■□□□□ 0.12
SDF2-202ENST00000585428 IRF7Q92985 503 aa15.81■□□□□ 0.12
SDF2-202ENST00000585428 BRD9Q9H8M2 597 aa15.81■□□□□ 0.12
SDF2-202ENST00000585428 MYH15Q9Y2K3 1946 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 M0QZQ0 153 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 PSMC3P17980 439 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 VIPR2P41587 438 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 MLLT6P55198 1093 aaPredicted RBP15.8■□□□□ 0.12
SDF2-202ENST00000585428 MCL1Q07820 350 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 TWF1Q12792 350 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 GNL2Q13823 731 aaKnown RBP15.8■□□□□ 0.12
SDF2-202ENST00000585428 SEZ6Q53EL9 994 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 HYIQ5T013 277 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 IQCEQ6IPM2 695 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 DTHD1Q6ZMT9 781 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 MFSD6LQ8IWD5 586 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 KCTD17Q8N5Z5 321 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 SYT2Q8N9I0 419 aaPredicted RBP15.8■□□□□ 0.12
SDF2-202ENST00000585428 KIF2CQ99661 725 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 LRRC3Q9BY71 257 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 HAPLN2Q9GZV7 340 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 CHRDQ9H2X0 955 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 PLEKHA5Q9HAU0 1116 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.8■□□□□ 0.12
SDF2-202ENST00000585428 PPP4R2Q9NY27 417 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 PCDHB8Q9UN66 801 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 FANCMQ8IYD8 2048 aa15.8■□□□□ 0.12
SDF2-202ENST00000585428 TTC26A0AVF1 554 aa15.79■□□□□ 0.12
SDF2-202ENST00000585428 ARNTLO00327 626 aa15.79■□□□□ 0.12
SDF2-202ENST00000585428 VNN2O95498 520 aa15.79■□□□□ 0.12
SDF2-202ENST00000585428 MAPTP10636 758 aaKnown RBP15.79■□□□□ 0.12
SDF2-202ENST00000585428 PLS3P13797 630 aa15.79■□□□□ 0.12
SDF2-202ENST00000585428 MARCKSP29966 332 aaPredicted RBP15.79■□□□□ 0.12
SDF2-202ENST00000585428 LRPAP1P30533 357 aa15.79■□□□□ 0.12
SDF2-202ENST00000585428 MCM4P33991 863 aa15.79■□□□□ 0.12
SDF2-202ENST00000585428 ZNF280DQ6N043 979 aa15.79■□□□□ 0.12
SDF2-202ENST00000585428 ZPBP2Q6X784 338 aa15.79■□□□□ 0.12
SDF2-202ENST00000585428 ELMOD1Q8N336 334 aa15.79■□□□□ 0.12
SDF2-202ENST00000585428 TMEM130Q8N3G9 435 aa15.79■□□□□ 0.12
SDF2-202ENST00000585428 FAM184AQ8NB25 1140 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms