RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 NCAPHQ15003 741 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 IQCB1Q15051 598 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 USP41Q3LFD5 358 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 FILIP1LQ4L180 1135 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 C11orf57Q6ZUT1 292 aaPredicted RBP10.04□□□□□ -0.8
UBBP4-201ENST00000583708 EFCAB13Q8IY85 973 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 TMEM86AQ8N2M4 240 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 C1orf127Q8N9H9 656 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 FBXL13Q8NEE6 735 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 ZSWIM2Q8NEG5 633 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 FBXO22Q8NEZ5 403 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 PPP2R3CQ969Q6 453 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 JAKMIP2Q96AA8 810 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 SUSD3Q96L08 255 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 CNOT6LQ96LI5 555 aaKnown RBP10.04□□□□□ -0.8
UBBP4-201ENST00000583708 TUBGCP2Q9BSJ2 902 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 ZNF576Q9H609 170 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 FANCLQ9NW38 375 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 LIMA1Q9UHB6 759 aaKnown RBP10.04□□□□□ -0.8
UBBP4-201ENST00000583708 MAFFQ9ULX9 164 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 PLAGL2Q9UPG8 496 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 YBX2Q9Y2T7 364 aaKnown RBP10.04□□□□□ -0.8
UBBP4-201ENST00000583708 NUB1Q9Y5A7 615 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 IRAK3Q9Y616 596 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 CITO14578 2027 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 TRIOBPQ9H2D6 2365 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 LCHNA4D1U4 455 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 KPNA7A9QM74 516 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 KCNJ18B7U540 433 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 H7C4K7 107 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 M0QZQ0 153 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 NCK2O43639 380 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 SOD2P04179 222 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 CYP11A1P05108 521 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 TPM3P06753 285 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 TRIM21P19474 475 aaKnown RBP10.03□□□□□ -0.8
UBBP4-201ENST00000583708 FMO5P49326 533 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 CLCNKBP51801 687 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 KCNH2Q12809 1159 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 BIRC3Q13489 604 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 NCOA4Q13772 614 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 KCNJ12Q14500 433 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 VWA3BQ502W6 1294 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 WDR44Q5JSH3 913 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 HABP4Q5JVS0 413 aaKnown RBP10.03□□□□□ -0.8
UBBP4-201ENST00000583708 GLRA4Q5JXX5 417 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 C1orf220Q5T0J3 134 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 TCERG1LQ5VWI1 586 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.03□□□□□ -0.8
UBBP4-201ENST00000583708 RTL10Q7L3V2 364 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 TMCO2Q7Z6W1 182 aaPredicted RBP10.03□□□□□ -0.8
UBBP4-201ENST00000583708 RNF168Q8IYW5 571 aaPredicted RBP10.03□□□□□ -0.8
UBBP4-201ENST00000583708 TOP6BLQ8N6T0 577 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 OR5B17Q8NGF7 314 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 CXorf38Q8TB03 319 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 ZNF516Q92618 1163 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 C18orf25Q96B23 403 aaPredicted RBP10.03□□□□□ -0.8
UBBP4-201ENST00000583708 HPDLQ96IR7 371 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 GZF1Q9H116 711 aaPredicted RBP10.03□□□□□ -0.8
UBBP4-201ENST00000583708 NKX2-4Q9H2Z4 354 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 CYP3A43Q9HB55 503 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 CBX8Q9HC52 389 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 CHST7Q9NS84 486 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 RAB20Q9NX57 234 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 DNAJB4Q9UDY4 337 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 PCDHB8Q9UN66 801 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 AGAP1Q9UPQ3 857 aa10.03□□□□□ -0.8
UBBP4-201ENST00000583708 FNDC1Q4ZHG4 1894 aaPredicted RBP10.02□□□□□ -0.8
UBBP4-201ENST00000583708 CASTOR2A6NHX0 329 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 LPXNO60711 386 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 HUS1O60921 280 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 OAZ2O95190 189 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 ASS1P00966 412 aaKnown RBP10.02□□□□□ -0.81
UBBP4-201ENST00000583708 ITGB3P05106 788 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 ODC1P11926 461 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 FGFR3P22607 806 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 RFX1P22670 979 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 TBXAS1P24557 533 aaPredicted RBP10.02□□□□□ -0.81
UBBP4-201ENST00000583708 PBX2P40425 430 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 LHX1P48742 406 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 YWHAEP62258 255 aaKnown RBP10.02□□□□□ -0.81
UBBP4-201ENST00000583708 SOX4Q06945 474 aaPredicted RBP10.02□□□□□ -0.81
UBBP4-201ENST00000583708 PPP3CAQ08209 521 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 SMARCB1Q12824 385 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 GPM6BQ13491 265 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 UVSSAQ2YD98 709 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 FKBP15Q5T1M5 1219 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 ZNF697Q5TEC3 545 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 TDRD10Q5VZ19 366 aaKnown RBP10.02□□□□□ -0.81
UBBP4-201ENST00000583708 FUT10Q6P4F1 479 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 GBP6Q6ZN66 633 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 ANKS3Q6ZW76 656 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 ENOSF1Q7L5Y1 443 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 METTL23Q86XA0 190 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 DHX40Q8IX18 779 aaKnown RBP10.02□□□□□ -0.81
UBBP4-201ENST00000583708 AOPEPQ8N6M6 819 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 KLHL23Q8NBE8 558 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 EHBP1Q8NDI1 1231 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 SPPL3Q8TCT6 385 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 PLEKHO2Q8TD55 490 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms