RNA–Protein interactions for RNA: ENST00000583569.5

NUP85-222, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-222	ENST00000583569	CYB5RL	Q6IPT4	315 aa		5.51	□□□□□ -1.53
NUP85-222	ENST00000583569	SWSAP1	Q6NVH7	229 aa		5.51	□□□□□ -1.53
NUP85-222	ENST00000583569	COL23A1	Q86Y22	540 aa	Predicted RBP	5.51	□□□□□ -1.53
NUP85-222	ENST00000583569	SYT12	Q8IV01	421 aa		5.51	□□□□□ -1.53
NUP85-222	ENST00000583569	BHMT2	Q9H2M3	363 aa		5.51	□□□□□ -1.53
NUP85-222	ENST00000583569	DDX21	Q9NR30	783 aa	Known RBP eCLIP	5.51	□□□□□ -1.53
NUP85-222	ENST00000583569	ZDHHC8	Q9ULC8	765 aa		5.51	□□□□□ -1.53
NUP85-222	ENST00000583569	SLC45A2	Q9UMX9	530 aa		5.51	□□□□□ -1.53
NUP85-222	ENST00000583569	XDH	P47989	1333 aa		5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	CCDC194	A0A1B0GVG4	234 aa		5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	LEFTY2	O00292	366 aa		5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	MUSK	O15146	869 aa		5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	PHGDH	O43175	533 aa	Known RBP	5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	MGEA5	O60502	916 aa		5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	AGFG2	O95081	481 aa		5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	MATN4	O95460	622 aa		5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	NBPF7	P0C2Y1	421 aa	Predicted RBP	5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	KIT	P10721	976 aa		5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	APOBEC3A	P31941	199 aa	Predicted RBP	5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	KCNJ5	P48544	419 aa		5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	PSMC1	P62191	440 aa	Known RBP	5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	EXOSC9	Q06265	439 aa	Known RBP	5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	SAFB	Q15424	915 aa	Known RBP eCLIP	5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	HTR3D	Q70Z44	454 aa		5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	PALM2	Q8IXS6	379 aa		5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	CELF5	Q8N6W0	485 aa	Known RBP	5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	LRTOMT	Q8WZ04	291 aa		5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	RSAD1	Q9HA92	442 aa		5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	PIH1D1	Q9NWS0	290 aa	Known RBP	5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	TPCN1	Q9ULQ1	816 aa		5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	PCDHGB6	Q9Y5F9	930 aa		5.5	□□□□□ -1.53
NUP85-222	ENST00000583569	KRTAP9-6	A0A140TA67	174 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	KRTAP23-1	A1A580	65 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	RECQL4	O94761	1208 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	ANXA1	P04083	346 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	GNAI2	P04899	355 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	RARB	P10826	455 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	CKB	P12277	381 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	ACRV1	P26436	265 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	PEX2	P28328	305 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	SOX8	P57073	446 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	RNASE9	P60153	205 aa	Known RBP	5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	KIF22	Q14807	665 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	TSHZ3	Q63HK5	1081 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	APOA5	Q6Q788	366 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	PDSS2	Q86YH6	399 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	PCSK9	Q8NBP7	692 aa	Known RBP	5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	SLC17A8	Q8NDX2	589 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	PJA1	Q8NG27	643 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	DVL3	Q92997	716 aa	Predicted RBP	5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	DCLRE1C	Q96SD1	692 aa	Known RBP	5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	CDK5RAP1	Q96SZ6	601 aa	Known RBP	5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	C22orf23	Q9BZE7	217 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	IMPG2	Q9BZV3	1241 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	ATP6V0A4	Q9HBG4	840 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	RLIM	Q9NVW2	624 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	SORCS3	Q9UPU3	1222 aa		5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	USP15	Q9Y4E8	981 aa	Predicted RBP	5.49	□□□□□ -1.53
NUP85-222	ENST00000583569	ZNF785	A8K8V0	405 aa		5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	APAF1	O14727	1248 aa		5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	PQBP1	O60828	265 aa	Known RBP	5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	PRSS23	O95084	383 aa		5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	SCAF4	O95104	1147 aa	Known RBP	5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	HDC	P19113	662 aa		5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	SLC7A1	P30825	629 aa		5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	MAGEA10	P43363	369 aa	Predicted RBP	5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	SEMA5A	Q13591	1074 aa		5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	POLD3	Q15054	466 aa	Predicted RBP	5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	NOMO2	Q5JPE7	1267 aa		5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	FAM102A	Q5T9C2	384 aa	Predicted RBP	5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	EMC10	Q5UCC4	262 aa		5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	ZFPM1	Q8IX07	1006 aa		5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	RHOT2	Q8IXI1	618 aa		5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	IL31RA	Q8NI17	732 aa		5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	CPT1C	Q8TCG5	803 aa		5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	NUP133	Q8WUM0	1156 aa		5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	LRRC27	Q9C0I9	530 aa		5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	TRPM5	Q9NZQ8	1165 aa		5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	ATP11B	Q9Y2G3	1177 aa		5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	5.48	□□□□□ -1.53
NUP85-222	ENST00000583569	PRSS29P	A6NIE9	313 aa		5.47	□□□□□ -1.53
NUP85-222	ENST00000583569	DIRC3	C9JPN6	131 aa		5.47	□□□□□ -1.53
NUP85-222	ENST00000583569	TRIM24	O15164	1050 aa		5.47	□□□□□ -1.53
NUP85-222	ENST00000583569	SPATA31D3	P0C874	917 aa		5.47	□□□□□ -1.53
NUP85-222	ENST00000583569	PHKG2	P15735	406 aa		5.47	□□□□□ -1.53
NUP85-222	ENST00000583569	NPR1	P16066	1061 aa		5.47	□□□□□ -1.53
NUP85-222	ENST00000583569	GCSH	P23434	173 aa		5.47	□□□□□ -1.53
NUP85-222	ENST00000583569	ZNF135	P52742	658 aa	Predicted RBP	5.47	□□□□□ -1.53
NUP85-222	ENST00000583569	PICALM	Q13492	652 aa		5.47	□□□□□ -1.53
NUP85-222	ENST00000583569	R3HDM1	Q15032	1099 aa	Known RBP	5.47	□□□□□ -1.53
NUP85-222	ENST00000583569	AGAP9	Q5VTM2	703 aa		5.47	□□□□□ -1.53
NUP85-222	ENST00000583569	SPATA31D4	Q6ZUB0	917 aa		5.47	□□□□□ -1.53
NUP85-222	ENST00000583569	GDF7	Q7Z4P5	450 aa		5.47	□□□□□ -1.53
NUP85-222	ENST00000583569	TMIE	Q8NEW7	156 aa		5.47	□□□□□ -1.53
NUP85-222	ENST00000583569	OR56A1	Q8NGH5	318 aa		5.47	□□□□□ -1.53
NUP85-222	ENST00000583569	SCAMP4	Q969E2	229 aa		5.47	□□□□□ -1.53
NUP85-222	ENST00000583569	MARS2	Q96GW9	593 aa	Known RBP	5.47	□□□□□ -1.53

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