RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 AHRRA9YTQ3 701 aa4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 AP1G1O43747 822 aa4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 LY86O95711 162 aa4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 BMP15O95972 392 aa4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 PDCP20941 246 aa4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 ANTXR2P58335 489 aa4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 HDAC1Q13547 482 aaPredicted RBP4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 C19orf54Q5BKX5 351 aa4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 KRT40Q6A162 431 aa4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 B3GNT9Q6UX72 402 aa4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 DIS3LQ8TF46 1054 aaKnown RBP4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 FBXO41Q8TF61 875 aa4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 C1GALT1C1Q96EU7 318 aa4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 MVB12AQ96EY5 273 aa4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 TAAR9Q96RI9 348 aa4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 UIMC1Q96RL1 719 aa4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 C7orf25Q9BPX7 421 aa4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 GTPBP4Q9BZE4 634 aaKnown RBP4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 FAM204AQ9H8W3 233 aa4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 C14orf93Q9H972 538 aaKnown RBP4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 ANLNQ9NQW6 1124 aa4.76□□□□□ -1.65
SMCHD1-209ENST00000583441 CCDC154A6NI56 674 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 H3BML4 177 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 SLC16A6O15403 523 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 MTSS1O43312 755 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 HTRA2O43464 458 aaPredicted RBP4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 SGTAO43765 313 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 CTNND1O60716 968 aaKnown RBP4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 PRAMEF4O60810 478 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 TMEM127O75204 238 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 GAAP10253 952 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 ECHS1P30084 290 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 FAM189BP81408 668 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 PGS1Q32NB8 556 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 GAGE13Q4V321 117 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 RUSC1-AS1Q66K80 236 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 SLC4A10Q6U841 1118 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 TAS1R1Q7RTX1 841 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 SRGAP1Q7Z6B7 1085 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 CATIPQ7Z7H3 387 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 CLEC14AQ86T13 490 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 DENND1CQ8IV53 801 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 PRR18Q8N4B5 295 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 SH2D3CQ8N5H7 860 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 ZNF480Q8WV37 535 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 SNX33Q8WV41 574 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 NRG4Q8WWG1 115 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 RIN2Q8WYP3 895 aaPredicted RBP4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 MANSC1Q9H8J5 431 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 ARNT2Q9HBZ2 717 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 SERPINB13Q9UIV8 391 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 IPPQ9Y573 584 aa4.75□□□□□ -1.65
SMCHD1-209ENST00000583441 CGB1A6NKQ9 187 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 FAM227AF5H4B4 570 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 RNASET2O00584 256 aaKnown RBP4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 NRP1O14786 923 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 AKR1B10O60218 316 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 NDUFA10O95299 355 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 ESRRBO95718 433 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 GSPT1P15170 499 aaKnown RBP4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 CTSSP25774 331 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 BLOC1S1P78537 153 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 CD69Q07108 199 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 PPP3CAQ08209 521 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 MST1LQ2TV78 715 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 TTC7BQ86TV6 843 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 GRAMD1CQ8IYS0 662 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 CAMKK1Q8N5S9 505 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 CYFIP2Q96F07 1278 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 ZNF700Q9H0M5 742 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 MAN1C1Q9NR34 630 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 SEMA4GQ9NTN9 838 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 INTUQ9ULD6 942 aa4.74□□□□□ -1.65
SMCHD1-209ENST00000583441 FRMPD2Q68DX3 1309 aaPredicted RBP4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 PIPSLA2A3N6 862 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 ARIH2O95376 493 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 GASTP01350 101 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 TRIM27P14373 513 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 HNRNPLP14866 589 aaKnown RBP eCLIP4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 PHKG2P15735 406 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 CRHR1P34998 444 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 MPP3Q13368 585 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 ZNF267Q14586 743 aaPredicted RBP4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 NOMO1Q15155 1222 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 APBB1IPQ7Z5R6 666 aaPredicted RBP4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 C11orf96Q7Z7L8 435 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 FAM43AQ8N2R8 423 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 PLA2G15Q8NCC3 412 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 SARGQ9BW04 601 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 BCO1Q9HAY6 547 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 ALG13Q9NP73 1137 aaKnown RBP4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 AKIP1Q9NQ31 210 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 DMRT3Q9NQL9 472 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 TRPM5Q9NZQ8 1165 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 NCDNQ9UBB6 729 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 MAGEL2Q9UJ55 1249 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 LIMCH1Q9UPQ0 1083 aa4.73□□□□□ -1.65
SMCHD1-209ENST00000583441 POLHQ9Y253 713 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms